(Q34481107)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9826519%20AND%20SRC:MED&resulttype=core&format=json

6 December 2019

title

Solution conformations and thermodynamics of structured peptides: molecular dynamics simulation with an implicit solvation model (English)

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6 December 2019

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2

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6 December 2019

3

Karplus M

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6 December 2019

author name string

Schaefer M

series ordinal

1

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6 December 2019

language of work or name

English

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publication date

1 December 1998

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Journal of Molecular Biology

6 December 2019

published in

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6 December 2019

volume

284

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6 December 2019

page(s)

835-848

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6 December 2019

issue

3

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Context-dependent secondary structure formation of a designed protein sequence

6 December 2019

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Studying the Stability of a Helical β-Heptapeptide by Molecular Dynamics Simulations

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Human lysozyme gene mutations cause hereditary systemic amyloidosis

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On the use of sequence homologies to predict protein structure: identical pentapeptides can have completely different conformations

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Configurational entropy of native proteins

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De novo design and structural analysis of a model beta-hairpin peptide system

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Statistical clustering techniques for the analysis of long molecular dynamics trajectories: analysis of 2.2-ns trajectories of YPGDV.

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Instability, unfolding and aggregation of human lysozyme variants underlying amyloid fibrillogenesis

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Molecular dynamics simulations of the unfolding of an alpha-helical analogue of ribonuclease A S-peptide in water

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Tests of the helix dipole model for stabilization of α-helices

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THE weighted histogram analysis method for free-energy calculations on biomolecules. I. The method

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Conformational Properties of Four Peptides Spanning the Sequence of Hen Lysozyme

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The energetics of ion-pair and hydrogen-bonding interactions in a helical peptide

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Protein folding simulations with genetic algorithms and a detailed molecular description

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Biased probability Monte Carlo conformational searches and electrostatic calculations for peptides and proteins

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11 October 2022

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Probability Distributions for Complex Systems: Adaptive Umbrella Sampling of the Potential Energy

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11 October 2022

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The Glu 2- ... Arg 10+ side-chain interaction in the C-peptide helix of ribonuclease A

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.2172

A unified formulation of the constant temperature molecular dynamics methods

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11 October 2022

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Molecular dynamics simulations of synthetic peptide folding

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.2172

Hydrophobic bonding and accessible surface area in proteins

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.2172

Identifiers

DOI

10.1006/JMBI.1998.2172

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9826519%20AND%20SRC:MED&resulttype=core&format=json

6 December 2019

1 reference