(Q34486788)

2 August 2017

1 reference

title

False discovery rates in spectral identification (English)

1 reference

2 August 2017

3

Nuno Bandeira

1 reference

2 August 2017

Kyowon Jeong

1

1 reference

PubMed ID

23176207

2 August 2017

Sangtae Kim

series ordinal

2

1 reference

2 August 2017

5 November 2012

1 reference

2 August 2017

1 reference

2 August 2017

13 Suppl 16

1 reference

2 August 2017

S2

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2105-13-s16-s2

2 August 2017

0 references

cites work

An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489529

On using samples of known protein content to assess the statistical calibration of scores assigned to peptide-spectrum matches in shotgun proteomics

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489529

Comment on "Unbiased statistical analysis for multi-stage proteomic search strategies".

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489529

The generating function of CID, ETD, and CID/ETD pairs of tandem mass spectra: applications to database search

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489529

A survey of computational methods and error rate estimation procedures for peptide and protein identification in shotgun proteomics

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489529

Target-decoy search strategy for mass spectrometry-based proteomics

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489529

Artificial decoy spectral libraries for false discovery rate estimation in spectral library searching in proteomics

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489529

Interlaboratory study characterizing a yeast performance standard for benchmarking LC-MS platform performance.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489529

Reanalysis of Tyrannosaurus rex Mass Spectra

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489529

Automated de novo protein sequencing of monoclonal antibodies

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489529

Precision proteomics: the case for high resolution and high mass accuracy

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489529

Spectral probabilities and generating functions of tandem mass spectra: a strike against decoy databases

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489529

False discovery rates and related statistical concepts in mass spectrometry-based proteomics

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489529

Clustering millions of tandem mass spectra

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489529

Assigning significance to peptides identified by tandem mass spectrometry using decoy databases

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489529

The standard protein mix database: a diverse data set to assist in the production of improved Peptide and protein identification software tools

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489529

Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489529

Quality assessment of tandem mass spectra based on cumulative intensity normalization

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489529

Open mass spectrometry search algorithm

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489529

TANDEM: matching proteins with tandem mass spectra

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489529

Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489529

Probability-based protein identification by searching sequence databases using mass spectrometry data

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489529

InsPecT: identification of posttranslationally modified peptides from tandem mass spectra

6 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1471-2105-13-S16-S2

Automatic quality assessment of peptide tandem mass spectra.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1471-2105-13-S16-S2

A method for reducing the time required to match protein sequences with tandem mass spectra

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23176207

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Unbiased statistical analysis for multi-stage proteomic search strategies

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23176207

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2105-13-S16-S2

1 reference

2 August 2017

journals/bmcbi/JeongKB12

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

2 August 2017

1 reference

PubMed ID

23176207