(Q34883272)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25488810%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

title

CRISPR RNA binding and DNA target recognition by purified Cascade complexes from Escherichia coli (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25488810%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

0 references

1 reference

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25488810%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

author name string

Natalia Beloglazova

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25488810%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

Konstantin Kuznedelov

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25488810%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

Robert Flick

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25488810%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

Kirill A Datsenko

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25488810%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

Greg Brown

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25488810%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

Ana Popovic

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25488810%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

Sofia Lemak

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25488810%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

Ekaterina Semenova

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25488810%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

Konstantin Severinov

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25488810%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

language of work or name

English

0 references

publication date

8 December 2014

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25488810%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

published in

Nucleic Acids Research

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25488810%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

volume

43

1 reference

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24 February 2020

issue

1

1 reference

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24 February 2020

page(s)

530-543

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25488810%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

24 February 2020

copyright license

start time

8 May 2017

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

ImageQuant

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC4288178/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

cites work

Structural biology. Crystal structure of a CRISPR RNA-guided surveillance complex bound to a ssDNA target

1 reference

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Crystal structure of the RNA-guided immune surveillance Cascade complex in Escherichia coli

8 July 2018

1 reference

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Structural biology. Crystal structure of the CRISPR RNA-guided surveillance complex from Escherichia coli

8 July 2018

1 reference

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CRISPR-Cas: an efficient tool for genome engineering of virulent bacteriophages.

8 July 2018

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Direct observation of R-loop formation by single RNA-guided Cas9 and Cascade effector complexes.

8 July 2018

1 reference

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Unravelling the structural and mechanistic basis of CRISPR-Cas systems

8 July 2018

1 reference

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The three major types of CRISPR-Cas systems function independently in CRISPR RNA biogenesis in Streptococcus thermophilus

8 July 2018

1 reference

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Cas6 specificity and CRISPR RNA loading in a complex CRISPR-Cas system

8 July 2018

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Degenerate target sites mediate rapid primed CRISPR adaptation.

8 July 2018

1 reference

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In vitro assembly and activity of an archaeal CRISPR-Cas type I-A Cascade interference complex.

8 July 2018

1 reference

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Toroidal Structure and DNA Cleavage by the CRISPR-Associated [4Fe-4S] Cluster Containing Cas4 Nuclease SSO0001 from Sulfolobus solfataricus

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4288178

Evolution of CRISPR RNA recognition and processing by Cas6 endonucleases

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4288178

Structure of an RNA silencing complex of the CRISPR-Cas immune system.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4288178

Structure and activity of the RNA-targeting Type III-B CRISPR-Cas complex of Thermus thermophilus

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4288178

Structure of the CRISPR interference complex CSM reveals key similarities with cascade

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4288178

Type I-E CRISPR-cas systems discriminate target from non-target DNA through base pairing-independent PAM recognition

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4288178

In vitro reconstitution of an Escherichia coli RNA-guided immune system reveals unidirectional, ATP-dependent degradation of DNA target

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4288178

High-throughput analysis of type I-E CRISPR/Cas spacer acquisition in E. coli

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4288178

CRISPR-mediated adaptive immune systems in bacteria and archaea

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4288178

In vitro reconstitution of Cascade-mediated CRISPR immunity in Streptococcus thermophilus.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4288178

The CRISPRs, they are a-changin': how prokaryotes generate adaptive immunity

8 July 2018

1 reference

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A Programmable Dual-RNA-Guided DNA Endonuclease in Adaptive Bacterial Immunity

8 July 2018

1 reference

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Tuning in to interference: R-loops and cascade complexes in CRISPR immunity.

8 July 2018

1 reference

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CRISPR immunity relies on the consecutive binding and degradation of negatively supercoiled invader DNA by Cascade and Cas3

8 July 2018

1 reference

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Proteins and DNA elements essential for the CRISPR adaptation process in Escherichia coli

8 July 2018

1 reference

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A genome-wide view of the expression and processing patterns of Thermus thermophilus HB8 CRISPR RNAs

8 July 2018

1 reference

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Mechanism of substrate selection by a highly specific CRISPR endoribonuclease

8 July 2018

1 reference

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RNA-guided genetic silencing systems in bacteria and archaea

8 July 2018

1 reference

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Structure and Mechanism of the CMR Complex for CRISPR-Mediated Antiviral Immunity

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4288178

Mature clustered, regularly interspaced, short palindromic repeats RNA (crRNA) length is measured by a ruler mechanism anchored at the precursor processing site

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4288178

CRISPR-Cas systems in bacteria and archaea: versatile small RNAs for adaptive defense and regulation

8 July 2018

1 reference

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Structures of the RNA-guided surveillance complex from a bacterial immune system

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4288178

Interference by clustered regularly interspaced short palindromic repeat (CRISPR) RNA is governed by a seed sequence

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4288178

An RNA-induced conformational change required for CRISPR RNA cleavage by the endoribonuclease Cse3

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4288178

Evolution and classification of the CRISPR-Cas systems

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4288178

RNA-guided complex from a bacterial immune system enhances target recognition through seed sequence interactions

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4288178

Structural and Functional Characterization of an Archaeal Clustered Regularly Interspaced Short Palindromic Repeat (CRISPR)-associated Complex for Antiviral Defense (CASCADE)

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4288178

Structural basis for CRISPR RNA-guided DNA recognition by Cascade

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4288178

CRISPR RNA maturation by trans-encoded small RNA and host factor RNase III

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4288178

The CRISPR/Cas bacterial immune system cleaves bacteriophage and plasmid DNA

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4288178

Sequence- and Structure-Specific RNA Processing by a CRISPR Endonuclease

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4288178

RNA-guided RNA cleavage by a CRISPR RNA-Cas protein complex

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4288178

Cas6 is an endoribonuclease that generates guide RNAs for invader defense in prokaryotes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4288178

CRISPR interference limits horizontal gene transfer in staphylococci by targeting DNA

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4288178

Small CRISPR RNAs guide antiviral defense in prokaryotes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4288178

Phage response to CRISPR-encoded resistance in Streptococcus thermophilus

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4288178

In-gel digestion for mass spectrometric characterization of proteins and proteomes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4288178

CRISPR Provides Acquired Resistance Against Viruses in Prokaryotes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4288178

A putative RNA-interference-based immune system in prokaryotes: computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of action

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4288178

A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/Cas subtypes exist in prokaryotic genomes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4288178

One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4288178

KMnO4 as a probe for lac promoter DNA melting and mechanism in vivo

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4288178

8 July 2018

Identifiers

DOI

10.1093/NAR/GKU1285

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25488810%20AND%20SRC:MED&resulttype=core&format=json

release_x3knfzvervgqjdpaph6zg6kd3m

24 February 2020

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/x3knfzvervgqjdpaph6zg6kd3m

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25488810%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

PubMed publication ID

25488810

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25488810%20AND%20SRC:MED&resulttype=core&format=json