(Q36689095)

15 August 2017

1 reference

title

Overcoming the dynamic range problem in mass spectrometry-based shotgun proteomics (English)

1 reference

15 August 2017

Linfeng Wu

1

1 reference

PubMed ID

17181475

15 August 2017

David K Han

series ordinal

2

1 reference

PubMed ID

17181475

15 August 2017

language of work or name

1 reference

1 December 2006

1 reference

Expert Review of Proteomics

15 August 2017

1 reference

15 August 2017

3

1 reference

15 August 2017

611-619

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15 August 2017

6

1 reference

A proteomics approach to understanding protein ubiquitination

15 August 2017

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Global analysis of protein phosphorylation in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Finishing the euchromatic sequence of the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Global analysis of protein expression in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Large-scale analysis of the yeast proteome by multidimensional protein identification technology

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Status of complete proteome analysis by mass spectrometry: SILAC labeled yeast as a model system

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

The human plasma proteome: history, character, and diagnostic prospects

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Alternative splicing and genome complexity

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Advances in proteomics data analysis and display using an accurate mass and time tag approach.

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Global survey of organ and organelle protein expression in mouse: combined proteomic and transcriptomic profiling

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Integrated analysis of protein composition, tissue diversity, and gene regulation in mouse mitochondria

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Global analysis of the Deinococcus radiodurans proteome by using accurate mass tags

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

A systematic characterization of mitochondrial proteome from human T leukemia cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Comprehensive proteomic analysis of the human spliceosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Proteome survey reveals modularity of the yeast cell machinery

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

In-depth analysis of the membrane and cytosolic proteome of red blood cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Toward the complete membrane proteome: high coverage of integral membrane proteins through transmembrane peptide detection.

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

A method for the comprehensive proteomic analysis of membrane proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Expanded coverage of the human heart mitochondrial proteome using multidimensional liquid chromatography coupled with tandem mass spectrometry.

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Evaluation of multidimensional chromatography coupled with tandem mass spectrometry (LC/LC-MS/MS) for large-scale protein analysis: the yeast proteome

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

2D-LC/MS techniques for the identification of proteins in highly complex mixtures

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Automated ultra-high-pressure multidimensional protein identification technology (UHP-MudPIT) for improved peptide identification of proteomic samples

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Ultra-high-efficiency strong cation exchange LC/RPLC/MS/MS for high dynamic range characterization of the human plasma proteome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Proteomic analysis of brain plasma membranes isolated by affinity two-phase partitioning

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Identification and proteomic profiling of exosomes in human urine

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Identification of new Golgi complex specific proteins by direct organelle proteomic analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Nucleolar proteome dynamics

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Subtractive proteomic mapping of the endothelial surface in lung and solid tumours for tissue-specific therapy

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Tandem MS analysis of brain clathrin-coated vesicles reveals their critical involvement in synaptic vesicle recycling

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Label-free semiquantitative peptide feature profiling of human breast cancer and breast disease sera via two-dimensional liquid chromatography-mass spectrometry.

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Depletion of multiple high-abundance proteins improves protein profiling capacities of human serum and plasma.

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Immunoaffinity separation of plasma proteins by IgY microbeads: meeting the needs of proteomic sample preparation and analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Multi-component immunoaffinity subtraction chromatography: an innovative step towards a comprehensive survey of the human plasma proteome

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Temporal analysis of phosphotyrosine-dependent signaling networks by quantitative proteomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Large-scale characterization of HeLa cell nuclear phosphoproteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Phosphoproteome analysis by mass spectrometry and its application to Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Phosphoproteomic analysis of rat liver by high capacity IMAC and LC-MS/MS.

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Highly selective enrichment of phosphorylated peptides from peptide mixtures using titanium dioxide microcolumns.

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Biomarkers in cancer staging, prognosis and treatment selection

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Toward biomarkers in multiple sclerosis: new advances.

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Lectin affinity capture, isotope-coded tagging and mass spectrometry to identify N-linked glycoproteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Identification and quantification of N-linked glycoproteins using hydrazide chemistry, stable isotope labeling and mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Systematic comparison of a two-dimensional ion trap and a three-dimensional ion trap mass spectrometer in proteomics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

A mammalian organelle map by protein correlation profiling

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Large scale protein profiling by combination of protein fractionation and multidimensional protein identification technology (MudPIT).

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Comparative evaluation of mass spectrometry platforms used in large-scale proteomics investigations

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Analysis of the low molecular weight serum peptidome using ultrafiltration and a hybrid ion trap-Fourier transform mass spectrometer

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Improved peptide identification in proteomics by two consecutive stages of mass spectrometric fragmentation

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Interfacing the Orbitrap Mass Analyzer to an Electrospray Ion Source

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Performance evaluation of a hybrid linear ion trap/orbitrap mass spectrometer

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Performance of a linear ion trap-Orbitrap hybrid for peptide analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

A model for random sampling and estimation of relative protein abundance in shotgun proteomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Quantification of C-reactive protein in the serum of patients with rheumatoid arthritis using multiple reaction monitoring mass spectrometry and 13C-labeled peptide standards

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Absolute quantification of the model biomarker prostate-specific antigen in serum by LC-Ms/MS using protein cleavage and isotope dilution mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Targeted proteomics of low-level proteins in human plasma by LC/MSn: using human growth hormone as a model system

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Quantification of intermediate-abundance proteins in serum by multiple reaction monitoring mass spectrometry in a single-quadrupole ion trap.

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Quantitative mass spectrometric multiple reaction monitoring assays for major plasma proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Absolute quantification of multisite phosphorylation by selective reaction monitoring mass spectrometry: determination of inhibitory phosphorylation status of cyclin-dependent kinases

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Mass spectrometric quantitation of peptides and proteins using Stable Isotope Standards and Capture by Anti-Peptide Antibodies (SISCAPA).

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Ultrasensitive and absolute quantification of the phosphoinositide 3-kinase/Akt signal transduction pathway by mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Probability-based protein identification by searching sequence databases using mass spectrometry data

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

InsPecT: identification of posttranslationally modified peptides from tandem mass spectra

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

ProbIDtree: an automated software program capable of identifying multiple peptides from a single collision-induced dissociation spectrum collected by a tandem mass spectrometer

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Randomized sequence databases for tandem mass spectrometry peptide and protein identification.

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Circadian orchestration of the hepatic proteome

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Global landscape of protein complexes in the yeast Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Novel gene and gene model detection using a whole genome open reading frame analysis in proteomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Genome annotation of Anopheles gambiae using mass spectrometry-derived data.

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Quantitative proteomics of the archaeon Methanococcus maripaludis validated by microarray analysis and real time PCR

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Automated 20 kpsi RPLC-MS and MS/MS with Chromatographic Peak Capacities of 1000−1500 and Capabilities in Proteomics and Metabolomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Multiple Reaction Monitoring to Identify Sites of Protein Phosphorylation with High Sensitivity

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

Quantitative Proteomic Comparison of Rat Mitochondria from Muscle, Heart, and Liver

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

High-Efficiency Nanoscale Liquid Chromatography Coupled On-Line with Mass Spectrometry Using Nanoelectrospray Ionization for Proteomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

High-Efficiency On-Line Solid-Phase Extraction Coupling to 15−150-μm-i.d. Column Liquid Chromatography for Proteomic Analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.3.6.611

21 January 2018

Identifiers

DOI

10.1586/14789450.3.6.611

1 reference

15 August 2017

1 reference

PubMed ID

17181475