(Q36959265)

17 August 2017

An integrated, directed mass spectrometric approach for in-depth characterization of complex peptide mixtures (English)

1 reference

17 August 2017

7

Ruedi Aebersold

1 reference

17 August 2017

3

Bernd Bodenmiller

1 reference

17 August 2017

1

Alexander Schmidt

1 reference

17 August 2017

Nils Gehlenborg

2

1 reference

17 August 2017

Lukas N Mueller

4

1 reference

17 August 2017

Dave Campbell

5

1 reference

17 August 2017

Markus Mueller

6

1 reference

17 August 2017

Bruno Domon

8

1 reference

17 August 2017

29 May 2008

1 reference

Molecular & Cellular Proteomics

17 August 2017

1 reference

17 August 2017

7

1 reference

17 August 2017

2138-2150

1 reference

17 August 2017

11

1 reference

Identification of cross-linked peptides from large sequence databases

17 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577211

Parts-per-billion mass measurement accuracy achieved through the combination of multiple linear regression and automatic gain control in a Fourier transform ion cyclotron resonance mass spectrometer

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577211

A high-quality catalog of the Drosophila melanogaster proteome

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577211

An integrated chemical, mass spectrometric and computational strategy for (quantitative) phosphoproteomics: application to Drosophila melanogaster Kc167 cells

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577211

Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577211

Development and validation of a spectral library searching method for peptide identification from MS/MS.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577211

Colorectal cancer and genetic alterations in the Wnt pathway

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577211

Global, in vivo, and site-specific phosphorylation dynamics in signaling networks

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577211

The human urinary proteome contains more than 1500 proteins, including a large proportion of membrane proteins

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577211

Quantitative profiling of the membrane proteome in a halophilic archaeon

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577211

Status of complete proteome analysis by mass spectrometry: SILAC labeled yeast as a model system

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577211

Global survey of organ and organelle protein expression in mouse: combined proteomic and transcriptomic profiling

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577211

Mass spectrometry and protein analysis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577211

Systematic identification of human mitochondrial disease genes through integrative genomics

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577211

Scoring proteomes with proteotypic peptide probes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577211

Highly selective enrichment of phosphorylated peptides from peptide mixtures using titanium dioxide microcolumns.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577211

Wnt signalling in stem cells and cancer

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577211

A novel strategy for quantitative proteomics using isotope-coded protein labels

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577211

A common open representation of mass spectrometry data and its application to proteomics research

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577211

Experimental Peptide Identification Repository (EPIR): an integrated peptide-centric platform for validation and mining of tandem mass spectrometry data

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577211

A model for random sampling and estimation of relative protein abundance in shotgun proteomics

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577211

A neutral loss activation method for improved phosphopeptide sequence analysis by quadrupole ion trap mass spectrometry

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577211

Implications of new proteomics strategies for biology and medicine

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577211

A statistical model for identifying proteins by tandem mass spectrometry

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577211

PANTHER: a library of protein families and subfamilies indexed by function

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577211

Properties of 13C-Substituted Arginine in Stable Isotope Labeling by Amino Acids in Cell Culture (SILAC)

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577211

Mass spectrometry-based proteomics

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577211

Abundance ratio-dependent proteomic analysis by mass spectrometry

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577211

Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577211

Quantitative analysis of complex protein mixtures using isotope-coded affinity tags

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577211

SuperHirn - a novel tool for high resolution LC-MS-based peptide/protein profiling

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577211

Protein identification with a single accurate mass of a cysteine-containing peptide and constrained database searching

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2577211

An integrated mass spectrometric and computational framework for the analysis of protein interaction networks.

27 June 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M700498-MCP200

Approaching complete peroxisome characterization by gas-phase fractionation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M700498-MCP200

Optimization and use of peptide mass measurement accuracy in shotgun proteomics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M700498-MCP200

Large-scale phosphorylation analysis of alpha-factor-arrested Saccharomyces cerevisiae.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M700498-MCP200

Comparison of label-free methods for quantifying human proteins by shotgun proteomics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M700498-MCP200

Reproducible isolation of distinct, overlapping segments of the phosphoproteome

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M700498-MCP200

Mass measurement errors caused by “local” frequency perturbations in FTICR mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M700498-MCP200

The implications of proteolytic background for shotgun proteomics

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18511481

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1074/MCP.M700498-MCP200

1 reference

17 August 2017

1 reference

17 August 2017

1 reference