(Q37294434)

English

Equivalence of protein inventories obtained from formalin-fixed paraffin-embedded and frozen tissue in multidimensional liquid chromatography-tandem mass spectrometry shotgun proteomic analysis.

scientific article published on 24 May 2009

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scholarly article

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29 January 2020

Equivalence of protein inventories obtained from formalin-fixed paraffin-embedded and frozen tissue in multidimensional liquid chromatography-tandem mass spectrometry shotgun proteomic analysis (English)

1 reference

Europe PubMed Central

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29 January 2020

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mass spectrometry

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4

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29 January 2020

Daniel C. Liebler

7

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29 January 2020

Robbert J C Slebos

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object named as

Robbert J C Slebos

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29 January 2020

author name string

Robert W Sprung

1

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29 January 2020

Jonathan W C Brock

2

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29 January 2020

Jarred P Tanksley

3

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29 January 2020

Mary Kay Washington

5

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29 January 2020

publication date

24 May 2009

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29 January 2020

Molecular & Cellular Proteomics

1 reference

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29 January 2020

8

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29 January 2020

1988-1998

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29 January 2020

8

1 reference

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29 January 2020

Evaluation of strong cation exchange versus isoelectric focusing of peptides for multidimensional liquid chromatography-tandem mass spectrometry

1 reference

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Identification of cross-linked peptides from large sequence databases

1 reference

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6 September 2017

Antigen retrieval for proteomic characterization of formalin-fixed and paraffin-embedded tissues

1 reference

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6 September 2017

Proteomic parsimony through bipartite graph analysis improves accuracy and transparency

1 reference

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Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry

1 reference

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6 September 2017

MyriMatch: highly accurate tandem mass spectral peptide identification by multivariate hypergeometric analysis

1 reference

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6 September 2017

Development of efficient protein extraction methods for shotgun proteome analysis of formalin-fixed tissues.

1 reference

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6 September 2017

Heat-induced antigen retrieval: mechanisms and application to histochemistry

1 reference

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6 September 2017

Mass spectrometric analysis of formalin-fixed paraffin-embedded tissue: unlocking the proteome within

1 reference

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6 September 2017

Direct cancer tissue proteomics: a method to identify candidate cancer biomarkers from formalin-fixed paraffin-embedded archival tissues

1 reference

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6 September 2017

Immobilized pH gradient isoelectric focusing as a first-dimension separation in shotgun proteomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2722776

6 September 2017

Protein extraction from formalin-fixed, paraffin-embedded tissue sections: quality evaluation by mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2722776

6 September 2017

Efficient method for the proteomic analysis of fixed and embedded tissues

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2722776

6 September 2017

Development and evaluation of a micro- and nanoscale proteomic sample preparation method

1 reference

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6 September 2017

Identification of proteins from formalin-fixed paraffin-embedded cells by LC-MS/MS.

1 reference

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6 September 2017

Proteomic analysis of formalin-fixed prostate cancer tissue

1 reference

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6 September 2017

WebGestalt: an integrated system for exploring gene sets in various biological contexts

1 reference

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6 September 2017

P-Mod: an algorithm and software to map modifications to peptide sequences using tandem MS data

1 reference

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6 September 2017

A model for random sampling and estimation of relative protein abundance in shotgun proteomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2722776

6 September 2017

Antigen retrieval in formalin-fixed, paraffin-embedded tissues: an enhancement method for immunohistochemical staining based on microwave oven heating of tissue sections

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2722776

6 September 2017

Application of immunofluorescent staining on paraffin sections improved by trypsin digestion

1 reference

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6 September 2017

Calcium-induced modification of protein conformation demonstrated by immunohistochemistry: What is the signal?

1 reference

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26 June 2018

Proteome analysis of microdissected formalin-fixed and paraffin-embedded tissue specimens.

1 reference

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3 September 2018

Probability-based evaluation of peptide and protein identifications from tandem mass spectrometry and SEQUEST analysis: the human proteome

1 reference

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3 September 2018

Reversing the effects of formalin fixation with citraconic anhydride and heat: a universal antigen retrieval method

1 reference

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3 September 2018

Possible role of tissue-bound calcium ions in citrate-mediated high-temperature antigen retrieval

1 reference

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20 October 2018

Further studies in the variability of pock counts

1 reference

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Localization of gamma-glutamyl transpeptidase in the proliferative state of liver. An enzyme histochemical and immunohistochemical study

1 reference

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inferred from PubMed ID database lookup

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1 reference

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of formaldehyde-induced modifications in proteins: reactions with insulin

1 reference

https://pubmed.ncbi.nlm.nih.gov/19467989

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1074/MCP.M800518-MCP200

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Europe PubMed Central

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29 January 2020

1 reference

Europe PubMed Central

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29 January 2020

1 reference

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29 January 2020

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