(Q37533698)

20 August 2017

Improved peptide identification in proteomics by two consecutive stages of mass spectrometric fragmentation (English)

1 reference

20 August 2017

1

1 reference

20 August 2017

2

Matthias Mann

1 reference

PMCID

518757

20 August 2017

language of work or name

English

0 references

publication date

3 September 2004

1 reference

Proceedings of the National Academy of Sciences of the United States of America

20 August 2017

1 reference

20 August 2017

101

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20 August 2017

13417-13422

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20 August 2017

37

1 reference

An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database

20 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=518757

The ABC's (and XYZ's) of peptide sequencing

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=518757

Novel linear quadrupole ion trap/FT mass spectrometer: performance characterization and use in the comparative analysis of histone H3 post-translational modifications

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=518757

A mechanistic investigation of the enhanced cleavage at histidine in the gas-phase dissociation of protonated peptides

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=518757

Improving large-scale proteomics by clustering of mass spectrometry data.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=518757

A statistical model for identifying proteins by tandem mass spectrometry

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=518757

"De novo" peptide sequencing by MALDI-quadrupole-ion trap mass spectrometry: a preliminary study

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=518757

Unbiased quantitative proteomics of lipid rafts reveals high specificity for signaling factors

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=518757

Evaluation of multidimensional chromatography coupled with tandem mass spectrometry (LC/LC-MS/MS) for large-scale protein analysis: the yeast proteome

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=518757

Large-scale protein identification using mass spectrometry

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=518757

Mass spectrometry-based proteomics

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=518757

Proteomics: the first decade and beyond

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=518757

Stop and go extraction tips for matrix-assisted laser desorption/ionization, nanoelectrospray, and LC/MS sample pretreatment in proteomics

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=518757

Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=518757

A two-dimensional quadrupole ion trap mass spectrometer

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=518757

Proteomics: the move to mixtures

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=518757

Automatic identification of proteins with a MALDI-quadrupole ion trap mass spectrometer.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=518757

Probability-based protein identification by searching sequence databases using mass spectrometry data

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=518757

Fourier transform ion cyclotron resonance mass spectrometry: a primer

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=518757

Error-tolerant identification of peptides in sequence databases by peptide sequence tags

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=518757

Proposal for a common nomenclature for sequence ions in mass spectra of peptides

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=518757

Mass spectrometry: analytical capabilities and potentials

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=518757

Electrospray ionization for mass spectrometry of large biomolecules

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=518757

Probability-based validation of protein identifications using a modified SEQUEST algorithm

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=518757

Appendix 5. Nomenclature for peptide fragment ions (positive ions).

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=518757

Trypsin cleaves exclusively C-terminal to arginine and lysine residues

25 June 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0405549101

A New Algorithm for the Evaluation of Shotgun Peptide Sequencing in Proteomics: Support Vector Machine Classification of Peptide MS/MS Spectra and SEQUEST Scores

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0405549101

De novo peptide sequencing by two-dimensional fragment correlation mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0405549101

Influence of basic residue content on fragment ion peak intensities in low-energy collision-induced dissociation spectra of peptides

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0405549101

Prediction of low-energy collision-induced dissociation spectra of peptides

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0405549101

Systematic delineation of scan modes in multidimensional mass spectrometry

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15347803

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

C-terminal peptide sequencing via multistage mass spectrometry

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15347803

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.0405549101

1 reference

20 August 2017

0 references

1 reference

20 August 2017

1 reference

PMCID

518757