(Q38005747)

English

Codon context

scientific article published on December 1990

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scholarly article

1 reference

Europe PubMed Central

26 August 2017

1 reference

Europe PubMed Central

Codon context (English)

1 reference

Europe PubMed Central

26 August 2017

author name string

R H Buckingham

1

1 reference

Europe PubMed Central

26 August 2017

publication date

1 December 1990

1 reference

Europe PubMed Central

26 August 2017

1 reference

Europe PubMed Central

26 August 2017

46

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Europe PubMed Central

26 August 2017

1126-1133

1 reference

Europe PubMed Central

26 August 2017

11-12

1 reference

Europe PubMed Central

26 August 2017

Distribution and evolution of sequence characteristics in the E. coli genome.

1 reference

https://api.crossref.org/works/10.1007%2FBF01936922

21 January 2018

Codon usage in bacteria: correlation with gene expressivity

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Effects of release factor context at UAA codons in Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Translation rates of individual codons are not correlated with tRNA abundances or with frequencies of utilization in Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A strong suppressor specific for UGA.

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Translation is a non-uniform process. Effect of tRNA availability on the rate of elongation of nascent polypeptide chains

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Codon context effects in missense suppression

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Suppression of mutations in the alkaline phosphatase structural cistron of E. coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Prevalence of amber suppressor-containing coliforms in the natural environment

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Modulation of Escherichia coli tryptophan (trp) attenuation by the UGA readthrough process

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Errors and alternatives in reading the universal genetic code.

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Usage of the three termination codons: compilation and analysis of the known eukaryotic and prokaryotic translation termination sequences

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The influence of codon context on genetic code translation

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Synonymous codon usage in Bacillus subtilis reflects both translational selection and mutational biases

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Doublet frequencies in evolutionary distinct groups

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The structure of the mouse glutathione peroxidase gene: the selenocysteine in the active site is encoded by the 'termination' codon, TGA

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Contextual constraints on synonymous codon choice

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Effects of surrounding sequence on the suppression of nonsense codons

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Reading frame switch caused by base-pair formation between the 3' end of 16S rRNA and the mRNA during elongation of protein synthesis in Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Effect of base sequence on in vitro protein-chain termination.

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of a novel translation factor necessary for the incorporation of selenocysteine into protein

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Effect of neighboring nucleotide sequences on suppression efficiency in amber mutants of T4 phage lysozyme

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Slippery runs, shifty stops, backward steps, and forward hops: -2, -1, +1, +2, +5, and +6 ribosomal frameshifting

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Adjacent effect on suppression efficiency. II. Study on ochre and amber mutants of T4 phage lysozyme

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The influence of the reading context upon the suppression of nonsense codons

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The influence of the reading context upon the suppression of nonsense codons

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Quantitative analysis of the relationship between nucleotide sequence and functional activity

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

cDNA sequence coding for human glutathione peroxidase

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Preferential codon usage in prokaryotic genes: the optimal codon-anticodon interaction energy and the selective codon usage in efficiently expressed genes

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Variable rate of polypeptide chain elongation for colicins A, E2 and E3

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Codon contexts from weakly expressed genes reduce expression in vivo.

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Constraints on codon context in Escherichia coli genes. Their possible role in modulating the efficiency of translation

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Studies of the complex between transfer RNAs with complementary anticodons. I. Origins of enhanced affinity between complementary triplets

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Codon catalog usage is a genome strategy modulated for gene expressivity

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Novel third-letter bias in Escherichia coli codons revealed by rigorous treatment of coding constraints.

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Context effects on nonsense codon suppression in Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Codon preferences in free-living microorganisms

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nucleotide sequence and expression of the selenocysteine-containing polypeptide of formate dehydrogenase (formate-hydrogen-lyase-linked) from Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Diversity in G + C content at the third position of codons in vertebrate genes and its cause

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Rates of aminoacyl-tRNA selection at 29 sense codons in vivo.

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The influence of the reading context upon the suppression of nonsense codons. 3

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The effect of context on synonymous codon usage in genes with low codon usage bias

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Statistical characterization of nucleic acid sequence functional domains

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Codon usage determines translation rate in Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nonrandom utilization of codon pairs in Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A temperature-sensitive mutant of Escherichia coli that shows enhanced misreading of UAG/A and increased efficiency for some tRNA nonsense suppressors

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mutant 16S ribosomal RNA: a codon-specific translational suppressor

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sense codons are found in specific contexts.

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An effect of codon context on the mistranslation of UGU codons in vitro.

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The mosaic genome of warm-blooded vertebrates

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Stop making sense: or Regulation at the level of termination in eukaryotic protein synthesis

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

In vitro synthesis of glutathione peroxidase from selenite Translational incorporation of selenocysteine

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Global variation in G+C content along vertebrate genome DNA. Possible correlation with chromosome band structures.

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Isolation and characterization of context mutations affecting the suppressibility of nonsense mutations

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Codon preference reflects mistranslational constraints: a proposal

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The signal for the termination of protein synthesis in procaryotes

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes: A proposal for a synonymous codon choice that is optimal for the E. coli translational system

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Recent advances in peptide chain termination

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A single UGA codon functions as a natural termination signal in the coliphage Qβ coat protein cistron

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Escherichia coli ribosomes translate in vivo with variable rate

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Context specific misreading of phenylalanine codons.

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nonsense suppression context effects in Escherichia coli bacteriophage T4.

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Context effects: Translation of UAG codon by suppressor tRNA is affected by the sequence following UAG in the message

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Codon usage in regulatory genes in Escherichia coli does not reflect selection for 'rare' codons

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Codon contexts in enterobacterial and coliphage genes.

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Analysis of specific misreading in Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/2253710

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1007/BF01936922

1 reference

Europe PubMed Central

26 August 2017

1 reference

Europe PubMed Central

26 August 2017

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