(Q38341790)

2 September 2017

1 reference

title

The conformational plasticity of eukaryotic RNA-dependent ATPases (English)

1 reference

2 September 2017

Sebastian Falk

3

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author name string

Sevim Ozgur

1

1 reference

2 September 2017

Gretel Buchwald

2

1 reference

2 September 2017

Sutapa Chakrabarti

4

1 reference

2 September 2017

Jesuraj Rajan Prabu

5

1 reference

2 September 2017

Elena Conti

6

1 reference

2 September 2017

language of work or name

English

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publication date

4 February 2015

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2 September 2017

1 reference

2 September 2017

282

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2 September 2017

850-863

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2 September 2017

5

1 reference

RNA helicases at work: binding and rearranging

2 September 2017

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

RNA helicase proteins as chaperones and remodelers

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

The long unwinding road of RNA helicases

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

From unwinding to clamping - the DEAD box RNA helicase family

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Translocation and unwinding mechanisms of RNA and DNA helicases

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

The DEAD box protein eIF4A. 2. A cycle of nucleotide and RNA-dependent conformational changes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Helicases: amino acid sequence comparisons and structure-function relationships

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Structure and mechanism of helicases and nucleic acid translocases

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

SF1 and SF2 helicases: family matters

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

RNA helicases--one fold for many functions

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Helicase structure and mechanism

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

DExD/H box RNA helicases: from generic motors to specific dissociation functions

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Structural basis for RNA unwinding by the DEAD-box protein Drosophila Vasa

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Structure of the exon junction core complex with a trapped DEAD-box ATPase bound to RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

The mRNA export protein DBP5 binds RNA and the cytoplasmic nucleoporin NUP214 in a mutually exclusive manner

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Structure of the RNA Binding Domain of a DEAD-Box Helicase Bound to Its Ribosomal RNA Target Reveals a Novel Mode of Recognition by an RNA Recognition Motif

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

DEAD-box proteins unwind duplexes by local strand separation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

The DEAD-box protein Ded1 unwinds RNA duplexes by a mode distinct from translocating helicases

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Structural basis for RNA-duplex recognition and unwinding by the DEAD-box helicase Mss116p

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

DEAD-box proteins can completely separate an RNA duplex using a single ATP.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

ATP hydrolysis is required for DEAD-box protein recycling but not for duplex unwinding

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

The DEXD/H-box RNA Helicase DDX19 Is Regulated by an -Helical Switch

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

The crystal structure of the exon junction complex reveals how it maintains a stable grip on mRNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Crystal structure of yeast initiation factor 4A, a DEAD-box RNA helicase

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Solution and crystal structures of mRNA exporter Dbp5p and its interaction with nucleotides

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

eIF4B, eIF4G and RNA regulate eIF4A activity in translation initiation by modulating the eIF4A conformational cycle

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Crystal structure of the human ATP-dependent splicing and export factor UAP56.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Intermolecular interactions within the abundant DEAD-box protein Dhh1 regulate its activity in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Structural and biochemical insights to the role of the CCR4-NOT complex and DDX6 ATPase in microRNA repression

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Structural and functional analysis of the human spliceosomal DEAD-box helicase Prp28

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Crystal structure and functional analysis of DEAD-box protein Dhh1p

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Multiple binding of repressed mRNAs by the P-body protein Rck/p54.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Crystal structure of the yeast eIF4A-eIF4G complex: an RNA-helicase controlled by protein-protein interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

A conserved mechanism of DEAD-box ATPase activation by nucleoporins and InsP6 in mRNA export

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

A DDX6-CNOT1 complex and W-binding pockets in CNOT9 reveal direct links between miRNA target recognition and silencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Human CWC22 escorts the helicase eIF4AIII to spliceosomes and promotes exon junction complex assembly

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Crystal structure of the human eIF4AIII-CWC22 complex shows how a DEAD-box protein is inhibited by a MIF4G domain

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Eukaryotic translation initiation factor 4AIII (eIF4AIII) is functionally distinct from eIF4AI and eIF4AII

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

The exon junction core complex is locked onto RNA by inhibition of eIF4AIII ATPase activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

The spliceosome deposits multiple proteins 20-24 nucleotides upstream of mRNA exon-exon junctions

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Mechanism of ATP turnover inhibition in the EJC

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

eIF4G stimulates the activity of the DEAD box protein eIF4A by a conformational guidance mechanism

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Structural basis for translational inhibition by the tumour suppressor Pdcd4

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Crystal structure of the eIF4A-PDCD4 complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

The N-terminal domain of Nup159 forms a beta-propeller that functions in mRNA export by tethering the helicase Dbp5 to the nuclear pore

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

MLN51 stimulates the RNA-helicase activity of eIF4AIII.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Structural analysis of the yeast Dhh1-Pat1 complex reveals how Dhh1 engages Pat1, Edc3 and RNA in mutually exclusive interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Structural basis for the mutually exclusive anchoring of P body components EDC3 and Tral to the DEAD box protein DDX6/Me31B

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Structural and biochemical studies of SLIP1-SLBP identify DBP5 and eIF3g as SLIP1-binding proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Structural basis for DNA duplex separation by a superfamily-2 helicase

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

The crystal structure of Mtr4 reveals a novel arch domain required for rRNA processing

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Structural analysis reveals the characteristic features of Mtr4, a DExH helicase involved in nuclear RNA processing and surveillance

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Prp43p contains a processive helicase structural architecture with a specific regulatory domain

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Structural basis for the function of DEAH helicases

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Characterization of the essential activities of Saccharomyces cerevisiae Mtr4p, a 3'->5' helicase partner of the nuclear exosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Interaction between a G-patch protein and a spliceosomal DEXD/H-box ATPase that is critical for splicing

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Insights into the activation of the helicase Prp43 by biochemical studies and structural mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Structural and functional characterization of the TgDRE multidomain protein, a DNA repair enzyme from Toxoplasma gondii

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

G-patch: a new conserved domain in eukaryotic RNA-processing proteins and type D retroviral polyproteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

The ATPase and helicase activities of Prp43p are stimulated by the G-patch protein Pfa1p during yeast ribosome biogenesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Ntr1 activates the Prp43 helicase to trigger release of lariat-intron from the spliceosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

The crystal structure of S. cerevisiae Ski2, a DExH helicase associated with the cytoplasmic functions of the exosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Ski2-like RNA helicase structures: common themes and complex assemblies

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

The molecular architecture of the TRAMP complex reveals the organization and interplay of its two catalytic activities

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

The yeast Ski complex is a hetero-tetramer

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

The yeast ski complex: crystal structure and RNA channeling to the exosome complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

RNA degradation by the exosome is promoted by a nuclear polyadenylation complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Cryptic pol II transcripts are degraded by a nuclear quality control pathway involving a new poly(A) polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

A new yeast poly(A) polymerase complex involved in RNA quality control

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

The exosome-binding factors Rrp6 and Rrp47 form a composite surface for recruiting the Mtr4 helicase

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

The RNA helicase database

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Gene products that promote mRNA turnover in Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Upf1 ATPase-dependent mRNP disassembly is required for completion of nonsense- mediated mRNA decay

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Structural and functional insights into the human Upf1 helicase core

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Molecular mechanisms for the RNA-dependent ATPase activity of Upf1 and its regulation by Upf2

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

NMD factors UPF2 and UPF3 bridge UPF1 to the exon junction complex and stimulate its RNA helicase activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Unusual bipartite mode of interaction between the nonsense-mediated decay factors, UPF1 and UPF2

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Human SMG-1, a novel phosphatidylinositol 3-kinase-related protein kinase, associates with components of the mRNA surveillance complex and is involved in the regulation of nonsense-mediated mRNA decay

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Cloning of a novel phosphatidylinositol kinase-related kinase: characterization of the human SMG-1 RNA surveillance protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

N- and C-terminal Upf1 phosphorylations create binding platforms for SMG-6 and SMG-5:SMG-7 during NMD

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Phospho-dependent and phospho-independent interactions of the helicase UPF1 with the NMD factors SMG5–SMG7 and SMG6

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

A novel phosphorylation-independent interaction between SMG6 and UPF1 is essential for human NMD.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

Tight intramolecular regulation of the human Upf1 helicase by its N- and C-terminal domains

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

The Q motif: a newly identified motif in DEAD box helicases may regulate ATP binding and hydrolysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

A conserved NTP-motif in putative helicases

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13198

21 January 2018

Identifiers

DOI

10.1111/FEBS.13198

1 reference

2 September 2017

1 reference