(Q38392041)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27233776%20AND%20SRC:MED&resulttype=core&format=json

3 April 2020

title

Exome-based proteogenomics of HEK-293 human cell line: Coding genomic variants identified at the level of shotgun proteome (English)

1 reference

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3 April 2020

2

1 reference

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3 April 2020

Arthur Kopylov

3

1 reference

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3 April 2020

Elizaveta Solovyeva

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27233776%20AND%20SRC:MED&resulttype=core&format=json

3 April 2020

Mark Ivanov

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27233776%20AND%20SRC:MED&resulttype=core&format=json

3 April 2020

Mikhail Gorshkov

11

1 reference

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3 April 2020

author name string

Anna A Lobas

1

1 reference

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3 April 2020

Irina Y Ilina

6

1 reference

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3 April 2020

Vassily N Lazarev

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27233776%20AND%20SRC:MED&resulttype=core&format=json

3 April 2020

Ksenia G Kuznetsova

8

1 reference

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3 April 2020

Ekaterina V Ilgisonis

9

1 reference

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3 April 2020

Victor G Zgoda

10

1 reference

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3 April 2020

Sergei A Moshkovskii

12

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3 April 2020

publication date

21 June 2016

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3 April 2020

1 reference

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3 April 2020

volume

16

1 reference

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3 April 2020

page(s)

1980-1991

1 reference

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3 April 2020

issue

14

1 reference

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OMICS studies: How about metadata checklist and data publications?

3 April 2020

cites work

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201500349

Interpretation of shotgun proteomic data: the protein inference problem

21 January 2018

1 reference

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Combining results of multiple search engines in proteomics

21 January 2018

1 reference

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Analyzing the first drafts of the human proteome.

21 January 2018

1 reference

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Reproducibility: In praise of open research measures

21 January 2018

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Interlaboratory study on differential analysis of protein glycosylation by mass spectrometry: the ABRF glycoprotein research multi-institutional study 2012

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201500349

Interlaboratory evaluation of automated, multiplexed peptide immunoaffinity enrichment coupled to multiple reaction monitoring mass spectrometry for quantifying proteins in plasma

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201500349

Comparative proteomic analysis of eleven common cell lines reveals ubiquitous but varying expression of most proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201500349

A mass-tolerant database search identifies a large proportion of unassigned spectra in shotgun proteomics as modified peptides

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201500349

Genome dynamics of the human embryonic kidney 293 lineage in response to cell biology manipulations

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201500349

Characteristics of a human cell line transformed by DNA from human adenovirus type 5

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201500349

Cloning and sequencing of the cellular-viral junctions from the human adenovirus type 5 transformed 293 cell line

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201500349

A practical guide for the functional annotation of genetic variations using SNPnexus

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201500349

Pyteomics--a Python framework for exploratory data analysis and rapid software prototyping in proteomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201500349

DeMix workflow for efficient identification of cofragmented peptides in high resolution data-dependent tandem mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201500349

Parallel tandem: a program for parallel processing of tandem mass spectra using PVM or MPI and X!Tandem.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201500349

Empirical multidimensional space for scoring peptide spectrum matches in shotgun proteomics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201500349

Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201500349

False discovery rates in spectral identification

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201500349

High performance computational analysis of large-scale proteome data sets to assess incremental contribution to coverage of the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201500349

Exome-driven characterization of the cancer cell lines at the proteome level: the NCI-60 case study.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201500349

Proteogenomics: concepts, applications and computational strategies

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201500349

Detection, evaluation and minimization of nonenzymatic deamidation in proteomic sample preparation

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201500349

Methionine to isothreonine conversion as a source of false discovery identifications of genetically encoded variants in proteogenomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201500349

Threonine versus isothreonine in synthetic peptides analyzed by high-resolution liquid chromatography/tandem mass spectrometry.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201500349

Unimod: Protein modifications for mass spectrometry.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201500349

Discovery of lysine post-translational modifications through mass spectrometric detection

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201500349

Mutational heterogeneity in cancer and the search for new cancer-associated genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201500349

An Analysis of the Sensitivity of Proteogenomic Mapping of Somatic Mutations and Novel Splicing Events in Cancer.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201500349

COSMIC: exploring the world's knowledge of somatic mutations in human cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201500349

dbSNP: the NCBI database of genetic variation

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201500349

Amino acid substitution matrices from protein blocks

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201500349

In-silico human genomics with GeneCards

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201500349

A census of human cancer genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201500349

Predicting the functional impact of protein mutations: application to cancer genomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201500349

The Proteomics Identifications database: 2010 update

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201500349

21 January 2018

Identifiers

DOI

10.1002/PMIC.201500349

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27233776%20AND%20SRC:MED&resulttype=core&format=json

3 April 2020

1 reference