(Q38488726)

3 September 2017

11 September 2017

title

Taxonomic Profiling and Metagenome Analysis of a Microbial Community from a Habitat Contaminated with Industrial Discharges (English)

1 reference

3 September 2017

0 references

6

Datta Madamwar

2 references

3 September 2017

11 September 2017

Martha Zakrzewski

2

0 references

Andreas Schlüter

object named as

Andreas Schlüter

series ordinal

5

0 references

Varun S. Shah

series ordinal

1

object named as

Varun Shah

0 references

Daniel Wibberg

series ordinal

3

object named as

Daniel Wibberg

2 references

3 September 2017

11 September 2017

4

Felix Eikmeyer

2 references

3 September 2017

11 September 2017

publication date

25 June 2013

1 reference

3 September 2017

1 October 2013

1 reference

11 September 2017

2 references

3 September 2017

11 September 2017

volume

66

1 reference

11 September 2017

issue

3

1 reference

11 September 2017

page(s)

533-550

1 reference

https://scigraph.springernature.com/pub.10.1007/s00248-013-0244-x

11 September 2017

exact match

Advances in molecular and "-omics" technologies to gauge microbial communities and bioremediation at xenobiotic/anthropogen contaminated sites

0 references

cites work

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

Tracking the influence of long-term chromium pollution on soil bacterial community structures by comparative analyses of 16S rRNA gene phylotypes.

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

Metagenomics for studying unculturable microorganisms: cutting the Gordian knot

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

Metagenomics: application of genomics to uncultured microorganisms

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

New directions and interactions in metagenomics research

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

Molecular biological access to the chemistry of unknown soil microbes: a new frontier for natural products

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

Biotechnological prospects from metagenomics

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

Gene ontology: tool for the unification of biology

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

The COG database: new developments in phylogenetic classification of proteins from complete genomes

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

The Pfam protein families database

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

KEGG: Kyoto Encyclopedia of Genes and Genomes

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

ARB: a software environment for sequence data

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

Phylogenetic classification of short environmental DNA fragments

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

Accurate taxonomy assignments from 16S rRNA sequences produced by highly parallel pyrosequencers

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

MEGAN analysis of metagenomic data

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

The University of Minnesota Biocatalysis/Biodegradation Database: improving public access

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

Methods for microbial DNA extraction from soil for PCR amplification

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

Soil washing improves the recovery of total community DNA from polluted and high organic content sediments

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

Identification of nitrogen-incorporating bacteria in petroleum-contaminated arctic soils by using [15N]DNA-based stable isotope probing and pyrosequencing

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

Identification of bacteria utilizing biphenyl, benzoate, and naphthalene in long-term contaminated soil

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

A polyphasic approach for assessing the suitability of bioremediation for the treatment of hydrocarbon-impacted soil.

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

Exposure of soil microbial communities to chromium and arsenic alters their diversity and structure.

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

Pyrosequencing investigation into the bacterial community in permafrost soils along the China-Russia Crude Oil Pipeline (CRCOP).

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

Generation and initial characterization of Pseudomonas stutzeri KC mutants with impaired ability to degrade carbon tetrachloride

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

New insights into the activation of o-xylene biodegradation in Pseudomonas stutzeri OX1 by pathway substrates

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

Kinetics of decolourisation and biotransformation of direct black 38 by C. hominis and P. stutzeri.

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

Comparative genomics and functional analysis of niche-specific adaptation in Pseudomonas putida.

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

Polyphasic taxonomy of the genus Shewanella and description of Shewanella oneidensis sp. nov.

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

Shewanella--the environmentally versatile genome

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

Decolorization of azo dyes by Rhodobacter sphaeroides

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

Intrinsic bioremediability of an aromatic hydrocarbon-polluted groundwater: diversity of bacterial population and toluene monoxygenase genes.

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

Metabolic networks, microbial ecology and 'omics' technologies: towards understanding in situ biodegradation processes.

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

Hyperthermophilic phosphotriesterases/lactonases for the environment and human health.

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

Genomic analysis of polycyclic aromatic hydrocarbon degradation in Mycobacterium vanbaalenii PYR-1.

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

Metabolic reconstruction of aromatic compounds degradation from the genome of the amazing pollutant-degrading bacterium Cupriavidus necator JMP134.

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

Bacterial metabolism of polychlorinated biphenyls

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

Novel organization of aromatic degradation pathway genes in a microbial community as revealed by metagenomic analysis

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

Growth substrate- and phase-specific expression of biphenyl, benzoate, and C1 metabolic pathways in Burkholderia xenovorans LB400.

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

Genetic and genomic insights into the role of benzoate-catabolic pathway redundancy in Burkholderia xenovorans LB400.

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

Metagenomics reveals diversity and abundance of meta-cleavage pathways in microbial communities from soil highly contaminated with jet fuel under air-sparging bioremediation

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

Assessment of toluene/biphenyl dioxygenase gene diversity in benzene-polluted soils: links between benzene biodegradation and genes similar to those encoding isopropylbenzene dioxygenases

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

Development of an oligonucleotide microarray to detect di- and monooxygenase genes for benzene degradation in soil.

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

The molecular basis for adaptive evolution in novel extradiol dioxygenases retrieved from the metagenome

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

Discovery of a novel styrene monooxygenase originating from the metagenome

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

High aromatic ring-cleavage diversity in birch rhizosphere: PAH treatment-specific changes of I.E.3 group extradiol dioxygenases and 16S rRNA bacterial communities in soil

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

Diversity, abundance, and consistency of microbial oxygenase expression and biodegradation in a shallow contaminated aquifer

2 references

https://api.crossref.org/works/10.1007%2FS00248-013-0253-9

21 January 2018

12 December 2020

Quantifying the biodegradation of phenanthrene by Pseudomonas stutzeri P16 in the presence of a nonionic surfactant.

1 reference

12 December 2020

Extraction of inhibitor-free metagenomic DNA from polluted sediments, compatible with molecular diversity analysis using adsorption and ion-exchange treatments

1 reference

12 December 2020

Accurate taxonomic assignment of short pyrosequencing reads

1 reference

12 December 2020

DNA Probe Method for the Detection of Specific Microorganisms in the Soil Bacterial Community

1 reference

12 December 2020

Decolorization of methyl red by a mixed culture of Bacillus sp. and Pseudomonas stutzeri

1 reference

12 December 2020

Degradation of p-nitrophenol by the phototrophic bacterium Rhodobacter capsulatus

1 reference

12 December 2020

MetaSAMS--a novel software platform for taxonomic classification, functional annotation and comparative analysis of metagenome datasets

1 reference

12 December 2020

Evaluation and optimization of DNA extraction and purification procedures for soil and sediment samples

1 reference

12 December 2020

DNA recovery from soils of diverse composition.

1 reference

12 December 2020

Dynamics of bacterial communities in two unpolluted soils after spiking with phenanthrene: soil type specific and common responders

1 reference

12 December 2020

Genome sequencing in microfabricated high-density picolitre reactors

1 reference

12 December 2020

Gene-targeted-metagenomics reveals extensive diversity of aromatic dioxygenase genes in the environment

1 reference

12 December 2020

10.1007/S00248-013-0253-9

Identifiers

DOI

1 reference

10.1007/S00248-013-0244-X

3 September 2017

1 reference

Dimensions Publication ID

11 September 2017

1040711880

0 references

1 reference

3 September 2017

1 reference

ResearchGate publication ID

11 September 2017

241279943