Home
Random
Nearby
Log in
Settings
Donate Now
If this site has been useful to you, please give today.
About Wikidata
Disclaimers
Search
(Q38729671)
Watch
English
GenomeHubs: simple containerized setup of a custom Ensembl database and web server for any species.
scientific article published on January 2017
In more languages
default for all languages
No label defined
No description defined
edit
Statements
instance of
scholarly article
1 reference
stated in
Europe PubMed Central
PMC publication ID
5467552
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28605774%20AND%20SRC:MED&resulttype=core&format=json
retrieved
22 March 2020
title
GenomeHubs: simple containerized setup of a custom Ensembl database and web server for any species
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
5467552
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28605774%20AND%20SRC:MED&resulttype=core&format=json
retrieved
22 March 2020
main subject
web server
1 reference
based on heuristic
inferred from title
author
Sujai Kumar
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMC publication ID
5467552
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28605774%20AND%20SRC:MED&resulttype=core&format=json
retrieved
22 March 2020
Mark Blaxter
series ordinal
4
1 reference
stated in
Europe PubMed Central
PMC publication ID
5467552
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28605774%20AND%20SRC:MED&resulttype=core&format=json
retrieved
22 March 2020
Richard Challis
1 reference
stated in
ORCID Public Data File 2021
author name string
Richard J Challis
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
5467552
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28605774%20AND%20SRC:MED&resulttype=core&format=json
retrieved
22 March 2020
Lewis Stevens
series ordinal
3
1 reference
stated in
Europe PubMed Central
PMC publication ID
5467552
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28605774%20AND%20SRC:MED&resulttype=core&format=json
retrieved
22 March 2020
publication date
1 January 2017
1 reference
stated in
Europe PubMed Central
PMC publication ID
5467552
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28605774%20AND%20SRC:MED&resulttype=core&format=json
retrieved
22 March 2020
published in
Database
1 reference
stated in
Europe PubMed Central
PMC publication ID
5467552
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28605774%20AND%20SRC:MED&resulttype=core&format=json
retrieved
22 March 2020
volume
2017
1 reference
stated in
Europe PubMed Central
PMC publication ID
5467552
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28605774%20AND%20SRC:MED&resulttype=core&format=json
retrieved
22 March 2020
copyright license
Creative Commons Attribution 4.0 International
start time
18 May 2017
1 reference
stated in
April 2022 Public Data File from Crossref
copyright status
copyrighted
0 references
cites work
InterPro in 2017-beyond protein family and domain annotations
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5467552
retrieved
6 September 2017
WormBase ParaSite - a comprehensive resource for helminth genomics
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5467552
retrieved
6 September 2017
The Ensembl Variant Effect Predictor
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5467552
retrieved
6 September 2017
Ensembl 2016
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5467552
retrieved
6 September 2017
The International Nucleotide Sequence Database Collaboration
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5467552
retrieved
6 September 2017
The UCSC Genome Browser database: 2016 update
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5467552
retrieved
6 September 2017
Ensembl Genomes 2016: more genomes, more complexity
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5467552
retrieved
6 September 2017
WormBase 2016: expanding to enable helminth genomic research
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5467552
retrieved
6 September 2017
Gramene 2016: comparative plant genomics and pathway resources
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5467552
retrieved
6 September 2017
UniProtKB/Swiss-Prot, the Manually Annotated Section of the UniProt KnowledgeBase: How to Use the Entry View
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5467552
retrieved
6 September 2017
The Genome of Winter Moth (Operophtera brumata) Provides a Genomic Perspective on Sexual Dimorphism and Phenology.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5467552
retrieved
6 September 2017
BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5467552
retrieved
6 September 2017
Avianbase: a community resource for bird genomics
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5467552
retrieved
6 September 2017
VectorBase: an updated bioinformatics resource for invertebrate vectors and other organisms related with human diseases
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5467552
retrieved
6 September 2017
The Glanville fritillary genome retains an ancient karyotype and reveals selective chromosomal fusions in Lepidoptera
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5467552
retrieved
6 September 2017
InterMine: extensive web services for modern biology
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5467552
retrieved
6 September 2017
Using GBrowse 2.0 to visualize and share next-generation sequence data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5467552
retrieved
6 September 2017
JBrowse: a next-generation genome browser
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5467552
retrieved
6 September 2017
CEGMA: a pipeline to accurately annotate core genes in eukaryotic genomes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5467552
retrieved
6 September 2017
The Plant Genome Integrative Explorer Resource: PlantGenIE.org
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5467552
retrieved
25 September 2017
Reminder to deposit DNA sequences
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5467552
retrieved
23 June 2018
Comparative genomics of the tardigrades Hypsibius dujardini and Ramazzottius varieornatus.
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/28605774
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1093/DATABASE/BAX039
1 reference
stated in
Europe PubMed Central
PMC publication ID
5467552
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28605774%20AND%20SRC:MED&resulttype=core&format=json
retrieved
22 March 2020
DBLP publication ID
journals/biodb/ChallisKSB17
1 reference
stated in
DBLP Dataset 2021-01-02
retrieved
28 January 2021
PMC publication ID
5467552
1 reference
stated in
Europe PubMed Central
PMC publication ID
5467552
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28605774%20AND%20SRC:MED&resulttype=core&format=json
retrieved
22 March 2020
PubMed publication ID
28605774
1 reference
stated in
Europe PubMed Central
PMC publication ID
5467552
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28605774%20AND%20SRC:MED&resulttype=core&format=json
retrieved
22 March 2020
Sitelinks
Wikipedia
(0 entries)
edit
Wikibooks
(0 entries)
edit
Wikinews
(0 entries)
edit
Wikiquote
(0 entries)
edit
Wikisource
(0 entries)
edit
Wikiversity
(0 entries)
edit
Wikivoyage
(0 entries)
edit
Wiktionary
(0 entries)
edit
Multilingual sites
(0 entries)
edit