(Q39597367)

13 September 2017

Metabolite annotations based on the integration of mass spectral information (English)

1 reference

13 September 2017

Yoko Iijima

1

1 reference

13 September 2017

Yukiko Nakamura

2

1 reference

13 September 2017

Yoshiyuki Ogata

3

1 reference

13 September 2017

Ken'ichi Tanaka

4

1 reference

13 September 2017

Nozomu Sakurai

5

1 reference

13 September 2017

Kunihiro Suda

6

1 reference

13 September 2017

Tatsuya Suzuki

7

1 reference

13 September 2017

Hideyuki Suzuki

8

1 reference

13 September 2017

Koei Okazaki

9

1 reference

13 September 2017

Masahiko Kitayama

10

1 reference

13 September 2017

Shigehiko Kanaya

11

1 reference

13 September 2017

Koh Aoki

12

1 reference

13 September 2017

Daisuke Shibata

13

1 reference

13 September 2017

7 February 2008

1 reference

13 September 2017

1 reference

13 September 2017

54

1 reference

13 September 2017

949-962

1 reference

13 September 2017

5

1 reference

SetupX--a public study design database for metabolomic projects

13 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440531

Seven Golden Rules for heuristic filtering of molecular formulas obtained by accurate mass spectrometry

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440531

Metabolomic database annotations via query of elemental compositions: mass accuracy is insufficient even at less than 1 ppm

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440531

XCMS: processing mass spectrometry data for metabolite profiling using nonlinear peak alignment, matching, and identification

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440531

Plant metabolomics: from holistic hope, to hype, to hot topic.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440531

METLIN: a metabolite mass spectral database

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440531

A novel approach for nontargeted data analysis for metabolomics. Large-scale profiling of tomato fruit volatiles.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440531

The SOL Genomics Network: a comparative resource for Solanaceae biology and beyond

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440531

KaPPA-view: a web-based analysis tool for integration of transcript and metabolite data on plant metabolic pathway maps

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440531

MetaCyc and AraCyc. Metabolic pathway databases for plant research

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440531

A metabolomic analysis of medicinal diversity in Huang-qin (Scutellaria baicalensis Georgi) genotypes: discovery of novel compounds

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440531

Integration of transcriptomics and metabolomics for understanding of global responses to nutritional stresses in Arabidopsis thaliana

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440531

Genetic regulation of fruit development and ripening

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440531

MAPMAN: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440531

UGT73C6 and UGT78D1, glycosyltransferases involved in flavonol glycoside biosynthesis in Arabidopsis thaliana

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440531

Construction and application of a mass spectral and retention time index database generated from plant GC/EI-TOF-MS metabolite profiles

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440531

Nontargeted metabolome analysis by use of Fourier Transform Ion Cyclotron Mass Spectrometry

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440531

LIGAND: database of chemical compounds and reactions in biological pathways

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440531

Genome annotation: from sequence to biology

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440531

Metabolic profiling allows comprehensive phenotyping of genetically or environmentally modified plant systems

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440531

Activation tagging identifies a conserved MYB regulator of phenylpropanoid biosynthesis.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440531

A biologist's view of the Drosophila genome annotation assessment project

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440531

Parallel analysis of transcript and metabolic profiles: a new approach in systems biology

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440531

Metabolic profiling of flavonoids in Lotus japonicus using liquid chromatography Fourier transform ion cyclotron resonance mass spectrometry.

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440531

Integrated analysis of metabolite and transcript levels reveals the metabolic shifts that underlie tomato fruit development and highlight regulatory aspects of metabolic network behavior.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440531

Clarification of pathway-specific inhibition by Fourier transform ion cyclotron resonance/mass spectrometry-based metabolic phenotyping studies.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440531

Genetical metabolomics of flavonoid biosynthesis in Populus: a case study.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440531

Comprehensive metabolic profiling and phenotyping of interspecific introgression lines for tomato improvement.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440531

The light-hyperresponsive high pigment-2dg mutation of tomato: alterations in the fruit metabolome.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440531

Functional genomics by integrated analysis of metabolome and transcriptome of Arabidopsis plants over-expressing an MYB transcription factor

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440531

Metabolic profiling of leaves and fruit of wild species tomato: a survey of the Solanum lycopersicum complex.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440531

Determination of brassinosteroids in the sub-femtomolar range using dansyl-3-aminophenylboronate derivatization and electrospray mass spectrometry

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440531

Metabolomics spectral formatting, alignment and conversion tools (MSFACTs).

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440531

Characterization and content of flavonoid glycosides in genetically modified tomato (Lycopersicon esculentum) fruits.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440531

Cysteinyl-flavan-3-ol conjugates from grape procyanidins. Antioxidant and antiproliferative properties

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440531

Integrative gene-metabolite network with implemented causality deciphers informational fluxes of sulphur stress response

21 August 2018

1 reference

Crossref

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2008.03434.X

Untargeted large-scale plant metabolomics using liquid chromatography coupled to mass spectrometry

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2008.03434.X

The genetics of plant metabolism

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2008.03434.X

Steroidal alkaloid glycosides, esculeosides C and D, from the ripe fruit of cherry tomato

21 January 2018

1 reference

12 December 2020

A highly efficient transformation protocol for Micro-Tom, a model cultivar for tomato functional genomics

1 reference

12 December 2020

A liquid chromatography-mass spectrometry-based metabolome database for tomato

1 reference

12 December 2020

Identification of a Flavonol 7-O-Rhamnosyltransferase Gene Determining Flavonoid Pattern inArabidopsisby Transcriptome Coexpression Analysis and Reverse Genetics

1 reference

12 December 2020

10.1111/J.1365-313X.2008.03434.X

Identifiers

DOI

1 reference

13 September 2017

1 reference

13 September 2017

1 reference