(Q39725381)

14 September 2017

Prediction of locally optimal splice sites in plant pre-mRNA with applications to gene identification in Arabidopsis thaliana genomic DNA. (English)

1 reference

14 September 2017

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V Brendel

1

1 reference

PMCID

147908

14 September 2017

J Kleffe

series ordinal

2

1 reference

PMCID

147908

14 September 2017

language of work or name

English

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publication date

1 October 1998

1 reference

14 September 2017

Nucleic Acids Research

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14 September 2017

26

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14 September 2017

4748-4757

1 reference

14 September 2017

20

1 reference

Finding the genes in genomic DNA.

14 September 2017

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F26.20.4748

Computational methods for the identification of genes in vertebrate genomic sequences.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F26.20.4748

Finding genes by computer: the state of the art.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F26.20.4748

Evaluation of gene structure prediction programs.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F26.20.4748

SPLICE SITE SELECTION IN PLANT PRE-mRNA SPLICING.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F26.20.4748

Splicing of precursors to mRNA in higher plants: mechanism, regulation and sub-nuclear organisation of the spliceosomal machinery

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F26.20.4748

The AU-rich sequences present in the introns of plant nuclear pre-mRNAs are required for splicing.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F26.20.4748

3' splice site selection in dicot plant nuclei is position dependent

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F26.20.4748

Factors affecting authentic 5' splice site selection in plant nuclei

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F26.20.4748

Splice site prediction in Arabidopsis thaliana pre-mRNA by combining local and global sequence information

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F26.20.4748

Logitlinear models for the prediction of splice sites in plant pre-mRNA sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F26.20.4748

Predicting internal exons by oligonucleotide composition and discriminant analysis of spliceable open reading frames

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F26.20.4748

Binary specification of nonsense codons by splicing and cytoplasmic translation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F26.20.4748

A rule for termination-codon position within intron-containing genes: when nonsense affects RNA abundance

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F26.20.4748

RNA splice junctions of different classes of eukaryotes: sequence statistics and functional implications in gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F26.20.4748

Prediction of splice sites in plant pre-mRNA from sequence properties.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F26.20.4748

Cleaning the GenBank Arabidopsis thaliana data set.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F26.20.4748

Molecular analysis of three maize 22 kDa auxin-binding protein genes--transient promoter expression and regulatory regions

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F26.20.4748

Bronze-2 Gene Expression and Intron Splicing Patterns in Cells and Tissues of Zea mays L.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F26.20.4748

Prediction of complete gene structures in human genomic DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F26.20.4748

GeneGenerator--a flexible algorithm for gene prediction and its application to maize sequences.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F26.20.4748

Basic local alignment search tool

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F26.20.4748

Gene recognition via spliced sequence alignment.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F26.20.4748

Introns increase gene expression in cultured maize cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F26.20.4748

Alternative processing of the maize Ac transcript in Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F26.20.4748

Possible involvement of differential splicing in regulation of the activity of Arabidopsis ANP1 that is related to mitogen-activated protein kinase kinase kinases (MAPKKKs).

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F26.20.4748

Expression and RNA splicing of the maize glutathione S-transferase Bronze2 gene is regulated by cadmium and other stresses.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F26.20.4748

21 January 2018

Identifiers

DOI

10.1093/NAR/26.20.4748

1 reference

14 September 2017

1 reference

14 September 2017

1 reference

PMCID

147908