(Q39838661)

15 September 2017

Role of curved DNA in binding of Escherichia coli RNA polymerase to promoters (English)

1 reference

nucleic acid tertiary structure

15 September 2017

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A7592319

31 May 2024

promoter

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A7592319

31 May 2024

author name string

C. A. Nickerson

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A7592319

31 May 2024

E. C. Achberger

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A7592319

31 May 2024

language of work or name

English

1 reference

National Center for Biotechnology Information

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=7592319

31 May 2024

publication date

1 October 1995

1 reference

PMC publication ID

177394

full work available at URL

15 September 2017

https://jb.asm.org/content/jb/177/20/5756.full.pdf

file format

Portable Document Format

online access status

open access

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A7592319

http://jb.asm.org/cgi/content/abstract/177/20/5756

31 May 2024

online access status

open access

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A7592319

https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/7592319/?tool=EBI

31 May 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A7592319

https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/7592319/pdf/?tool=EBI

31 May 2024

file format

Portable Document Format

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A7592319

https://europepmc.org/articles/PMC177394

31 May 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A7592319

https://europepmc.org/articles/PMC177394?pdf=render

31 May 2024

file format

Portable Document Format

online access status

open access

content deliverer

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A7592319

https://journals.asm.org/doi/pdf/10.1128/jb.177.20.5756-5761.1995

31 May 2024

1 reference

10.1128/JB.177.20.5756-5761.1995

Crossref

DOI

https://api.crossref.org/works/10.1128/JB.177.20.5756-5761.1995

31 May 2024

published in

Journal of Bacteriology

1 reference

15 September 2017

177

1 reference

15 September 2017

20

1 reference

15 September 2017

5756-5761

1 reference

Sigma s-dependent promoters in Escherichia coli are located in DNA regions with intrinsic curvature

15 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

A third recognition element in bacterial promoters: DNA binding by the alpha subunit of RNA polymerase

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

Promoters responsive to DNA bending: a common theme in prokaryotic gene expression

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

Molecular sequestration stabilizes CAP-DNA complexes during polyacrylamide gel electrophoresis.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

Escherichia colipromoter sequences predictin vitroRNA polymerase selectivity

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

Escherichia coliΔ1-pyrroline-5-carboxylate reductase: gene sequence, protein overproduction and purification

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

The pUC plasmids, an M13mp7-derived system for insertion mutagenesis and sequencing with synthetic universal primers

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

The effect of the delta snbunit on the interaction ofBacillus subtilisRNA polymerase with bases in a SP82 early gene promoter

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

57 Sequencing end-labeled DNA with base-specific chemical cleavages

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

Identification, nucleotide sequence and expression of the regulatory region of the histidine operon of Escherichia coli K-12

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

Rigorous pattern-recognition methods for DNA sequences. Analysis of promoter sequences from Escherichia coli

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

Sequence distributions associated with DNA curvature are found upstream of strong E. coli promoters

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

Synthetic curved DNA sequences can act as transcriptional activators in Escherichia coli

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

Synthetic DNA bending sequences increase the rate of in vitro transcription initiation at the Escherichia coli lac promoter

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

Unusual properties of promoter-up mutations in the Escherichia coli galactose operon and evidence suggesting RNA polymerase-induced DNA bending

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

The hisR locus of Salmonella: Nucleotide sequence and expression

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

Enhancement of transcriptional activity of the Escherichia coli trp promoter by upstream A + T-rich regions

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

Effect of polyadenine-containing curved DNA on promoter utilization in Bacillus subtilis

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

Rotational orientation of upstream curved DNA affects promoter function in Bacillus subtilis

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

Integration host factor stimulates the phage lambda pL promoter

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

Upstream sequence activation of Escherichia coli argT promoter in vivo and in vitro.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

Gene organization and primary structure of a ribosomal RNA operon from Escherichia coli

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

Requirement for an upstream element for optimal transcription of a bacterial tRNA gene

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

Conformational change in the DNA associated with an unusual promoter mutation in a tRNA operon of Salmonella

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

Nucleotide sequence of a promoter recognized by Bacillus subtilis RNA polymerase

20 August 2018

1 reference

12 December 2020

Deletion analysis of a complex promoter for a developmentally regulated gene from Bacillus subtilis

1 reference

12 December 2020

Static bend of DNA helix at the activator recognition site of the ompF promoter in Escherichia coli

1 reference

12 December 2020

The interaction of Escherichia coli core RNA polymerase with specificity-determining subunits derived from unmodified and SP82-modified Bacillus subtilis RNA polymerase

1 reference

12 December 2020

10.1128/JB.177.20.5756-5761.1995

Identifiers

DOI

1 reference

15 September 2017

1 reference

PMC publication ID

177394

15 September 2017

1 reference

PMC publication ID

177394