(Q41288801)

29 September 2017

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title

Proteolysis in plants: mechanisms and functions (English)

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29 September 2017

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R D Vierstra

1

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PubMed ID

8980483

29 September 2017

language of work or name

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1 October 1996

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29 September 2017

28

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inferred from page(s)

published in

Plant Molecular Biology

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29 September 2017

32

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29 September 2017

275-302

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29 September 2017

1-2

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https://scigraph.springernature.com/pub.10.1007/bf00039386

29 September 2017

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cites work

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12 December 2020

The Pas2 protein essential for peroxisome biogenesis is related to ubiquitin-conjugating enzymes

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Functional expression and molecular characterization of AtUBC2-1, a novel ubiquitin-conjugating enzyme (E2) from Arabidopsis thaliana

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Demonstration of ATP-Dependent, Ubiquitin-Conjugating Activities in Higher Plants.

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Proteolytic processing of ovalbumin and beta-galactosidase by the proteasome to a yield antigenic peptides.

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Three-dimensional structure of a ubiquitin-conjugating enzyme (E2)

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12 December 2020

Proteasomes: multicatalytic proteinase complexes

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Multiubiquitin chains linked through lysine 48 are abundant in vivo and are competent intermediates in the ubiquitin proteolytic pathway

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12 December 2020

The tails of ubiquitin precursors are ribosomal proteins whose fusion to ubiquitin facilitates ribosome biogenesis

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Increasing gene expression in yeast by fusion to ubiquitin.

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Anaphase is initiated by proteolysis rather than by the inactivation of maturation-promoting factor.

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12 December 2020

The ubiquitin-activating enzyme (E1) gene family in Arabidopsis thaliana.

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12 December 2020

Role of a ubiquitin-conjugating enzyme in degradation of S- and M-phase cyclins

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12 December 2020

Abnormal proteins serve as eukaryotic stress signals and trigger the activation of heat shock genes

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12 December 2020

The Drosophila bendless gene encodes a neural protein related to ubiquitin-conjugating enzymes

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12 December 2020

A Purified Zinc Protease of Pea Chloroplasts, EP1, Degrades the Large Subunit of Ribulose-1,5-Bisphosphate Carboxylase/Oxygenase

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12 December 2020

Homologs of the essential ubiquitin conjugating enzymes UBC1, 4, and 5 in yeast are encoded by a multigene family in Arabidopsis thaliana.

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12 December 2020

A ubiquitin C-terminal isopeptidase that acts on polyubiquitin chains. Role in protein degradation

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12 December 2020

A 20S complex containing CDC27 and CDC16 catalyzes the mitosis-specific conjugation of ubiquitin to cyclin B

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12 December 2020

UBA 1: an essential yeast gene encoding ubiquitin-activating enzyme

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12 December 2020

The mechanism and functions of ATP-dependent proteases in bacterial and animal cells

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12 December 2020

Redirecting the specificity of ubiquitination by modifying ubiquitin-conjugating enzymes

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12 December 2020

Degradation of G alpha by the N-end rule pathway

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12 December 2020

Scanning transmission electron microscopy and small-angle scattering provide evidence that native Escherichia coli ClpP is a tetradecamer with an axial pore.

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12 December 2020

Differential expression of several E2-type ubiquitin carrier protein genes at different developmental stages in Arabidopsis thaliana and Nicotiana sylvestris.

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12 December 2020

Homologues of wheat ubiquitin-conjugating enzymes--TaUBC1 and TaUBC4 are encoded by small multigene families in Arabidopsis thaliana

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12 December 2020

Proteasome from Thermoplasma acidophilum: a threonine protease

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12 December 2020

The B-type cyclin kinase inhibitor p40SIC1 controls the G1 to S transition in S. cerevisiae

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12 December 2020

Inhibition of proteasome activities and subunit-specific amino-terminal threonine modification by lactacystin

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12 December 2020

Temporal and spatial expression of a thiolprotease gene during pea ovary senescence, and its regulation by gibberellin

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12 December 2020

The genomic organization and transcription of the ubiquitin genes of Trypanosoma cruzi

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12 December 2020

Structure and expression of sunflower ubiquitin genes

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12 December 2020

Examination of the contribution of vacuolar proteases to intracellular protein degradation in Chara corallina

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12 December 2020

Purification and initial characterization of the proteasome from the higher plant Spinacia oleracea

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12 December 2020

ClpX, an alternative subunit for the ATP-dependent Clp protease of Escherichia coli. Sequence and in vivo activities.

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12 December 2020

Expression of stress-responsive ubiquitin genes in potato tubers

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12 December 2020

Chlorophyll regulates accumulation of the plastid-encoded chlorophyll apoproteins CP43 and D1 by increasing apoprotein stability

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12 December 2020

Arabidopsis auxin-resistance gene AXR1 encodes a protein related to ubiquitin-activating enzyme E1.

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12 December 2020

Regulated degradation of the transcription factor Gcn4.

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12 December 2020

Gamma-interferon and expression of MHC genes regulate peptide hydrolysis by proteasomes

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12 December 2020

An essential yeast gene encoding a homolog of ubiquitin-activating enzyme

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12 December 2020

In vivo function of the proteasome in the ubiquitin pathway

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12 December 2020

Tertiary structures of class I ubiquitin-conjugating enzymes are highly conserved: crystal structure of yeast Ubc4

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12 December 2020

A molecular chaperone, ClpA, functions like DnaK and DnaJ.

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12 December 2020

Molecular structure of 20S and 26S proteasomes.

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12 December 2020

Role of protein degradation in the regulation of cellular protein content and amino acid pools

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12 December 2020

Mammalian subtilisins: the long-sought dibasic processing endoproteases

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12 December 2020

Surface hydrophobic residues of multiubiquitin chains essential for proteolytic targeting

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12 December 2020

Use of a reporter transgene to generate arabidopsis mutants in ubiquitin-dependent protein degradation

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12 December 2020

Structure of a diubiquitin conjugate and a model for interaction with ubiquitin conjugating enzyme (E2)

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12 December 2020

A multiubiquitin chain is confined to specific lysine in a targeted short-lived protein

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12 December 2020

Posttranslational Regulation of Nitrate Reductase in Higher Plants

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12 December 2020

Inhibitors of the proteasome block the degradation of most cell proteins and the generation of peptides presented on MHC class I molecules

1 reference

12 December 2020

Role of the ubiquitin-proteasome pathway in regulating abundance of the cyclin-dependent kinase inhibitor p27

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12 December 2020

Arabidopsis mutants compromised for the control of cellular damage during pathogenesis and aging.

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12 December 2020

Lysosomal (vacuolar) proteinases of yeast are essential catalysts for protein degradation, differentiation, and cell survival

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12 December 2020

Identification of a 50-kDa systemin-binding protein in tomato plasma membranes having Kex2p-like properties

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12 December 2020

cis-trans recognition and subunit-specific degradation of short-lived proteins

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12 December 2020

Cloning of a 16-kDa ubiquitin carrier protein from wheat and Arabidopsis thaliana. Identification of functional domains by in vitro mutagenesis.

1 reference

12 December 2020

S. cerevisiae 26S protease mutants arrest cell division in G2/metaphase

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12 December 2020

In Situ Detection of nDNA Fragmentation during the Differentiation of Tracheary Elements in Higher Plants.

1 reference

12 December 2020

Ubiquitin fusion augments the yield of cloned gene products in Escherichia coli

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12 December 2020

Ornithine decarboxylase is degraded by the 26S proteasome without ubiquitination

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12 December 2020

Cyclin ubiquitination: the destructive end of mitosis

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12 December 2020

Rapid degradation of unassembled ribulose 1,5-bisphosphate carboxylase small subunits in chloroplasts

1 reference

12 December 2020

Nucleotide sequence of a wheat chloroplast gene encoding the proteolytic subunit of an ATP-dependent protease

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12 December 2020

A proteasome inhibitor prevents activation of NF-kappa B and stabilizes a newly phosphorylated form of I kappa B-alpha that is still bound to NF-kappa B

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12 December 2020

Protein ubiquitination involving an E1-E2-E3 enzyme ubiquitin thioester cascade

1 reference

12 December 2020

Functions of the proteasome: the lysis at the end of the tunnel

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12 December 2020

A plastome mutation affects processing of both chloroplast and nuclear DNA-encoded plastid proteins

1 reference

12 December 2020

From the cradle to the grave: ring complexes in the life of a protein

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12 December 2020

Genetic and molecular analysis of hyperplastic discs, a gene whose product is required for regulation of cell proliferation in Drosophila melanogaster imaginal discs and germ cells

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12 December 2020

Isolation of a polyubiquitin promoter and its expression in transgenic potato plants

1 reference

12 December 2020

Isolation of a cDNA encoding a mammalian multiubiquitinating enzyme (E225K) and overexpression of the functional enzyme in Escherichia coli

1 reference

12 December 2020

Maize polyubiquitin genes: structure, thermal perturbation of expression and transcript splicing, and promoter activity following transfer to protoplasts by electroporation

1 reference

12 December 2020

The multiubiquitin-chain-binding protein Mcb1 is a component of the 26S proteasome in Saccharomyces cerevisiae and plays a nonessential, substrate-specific role in protein turnover.

1 reference

12 December 2020

Protein degradation in the endoplasmic reticulum

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12 December 2020

Developmental and age-related processes that influence the longevity and senescence of photosynthetic tissues in arabidopsis.

1 reference

12 December 2020

Rapid degradation of apoplastocyanin in Cu(II)-deficient cells of Chlamydomonas reinhardtii

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12 December 2020

Turnover of 1-aminocyclopropane-1-carboxylic Acid synthase protein in wounded tomato fruit tissue

1 reference

12 December 2020

The ubiquitin-proteasome proteolytic pathway

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12 December 2020

Ubiquitin, proteasomes, and the regulation of intracellular protein degradation

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12 December 2020

The ctpA gene encodes the C-terminal processing protease for the D1 protein of the photosystem II reaction center complex

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12 December 2020

Intracellular protein degradation in mammalian and bacterial cells: Part 2

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12 December 2020

Three proteolytic systems in the yeast saccharomyces cerevisiae.

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12 December 2020

Cotranslational processing and protein turnover in eukaryotic cells

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12 December 2020

A member of the KNOTTED class of homeodomain proteins encoded by the STM gene of Arabidopsis

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12 December 2020

Homology in structural organization between E. coli ClpAP protease and the eukaryotic 26 S proteasome

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12 December 2020

Crystal structure of the 20S proteasome from the archaeon T. acidophilum at 3.4 A resolution

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12 December 2020

Identification of two structurally related proteins involved in proteolytic processing of precursors targeted to the chloroplast

1 reference

12 December 2020

Tsp: a tail-specific protease that selectively degrades proteins with nonpolar C termini

1 reference

12 December 2020

Cloning and characterization of a 20-kDa ubiquitin carrier protein from wheat that catalyzes multiubiquitin chain formation in vitro

1 reference

12 December 2020

Activation-dependent ubiquitination of a T cell antigen receptor subunit on multiple intracellular lysines

1 reference

12 December 2020

Induction of wound response genes in tomato leaves by bestatin, an inhibitor of aminopeptidases

1 reference

12 December 2020

Proaleurain vacuolar targeting is mediated by short contiguous peptide interactions

1 reference

12 December 2020

Molecular characterization of a beta-type proteasome subunit from Arabidopsis thaliana co-expressed at a high level with an alpha-type proteasome subunit early in the cell cycle

1 reference

12 December 2020

Inhibition of ubiquitin-mediated proteolysis by the Arabidopsis 26 S protease subunit S5a.

1 reference

12 December 2020

Perturbation of the ubiquitin system causes leaf curling, vascular tissue alterations and necrotic lesions in a higher plant

1 reference

12 December 2020

Comparison of the three-dimensional structures of human, yeast, and oat ubiquitin

1 reference

12 December 2020

Isolation of Intact Protein Storage Vacuoles from Barley Aleurone (Identification of Aspartic and Cysteine Proteases)

1 reference

12 December 2020

A proteolytic pathway that recognizes ubiquitin as a degradation signal

1 reference

12 December 2020

The yeast DOA4 gene encodes a deubiquitinating enzyme related to a product of the human tre-2 oncogene

1 reference

12 December 2020

Cyclin is degraded by the ubiquitin pathway

1 reference

12 December 2020

Ubiquitin-dependent c-Jun degradation in vivo is mediated by the delta domain

1 reference

12 December 2020

Catalase Degradation in Sunflower Cotyledons during Peroxisome Transition from Glyoxysomal to Leaf Peroxisomal Function.

1 reference

12 December 2020

The ubiquitin system for protein degradation

1 reference

12 December 2020

Nitrate: nutrient and signal for plant growth.

1 reference

12 December 2020

Regulation of protein metabolism: Coupling of photosynthetic electron transport to in vivo degradation of the rapidly metabolized 32-kilodalton protein of the chloroplast membranes

1 reference

12 December 2020

Subcellular localization of ubiquitin and ubiquitinated proteins in Arabidopsis thaliana

1 reference

12 December 2020

p34Cdc28-mediated control of Cln3 cyclin degradation

1 reference

12 December 2020

Characterization of a cDNA clone encoding a chloroplast-targeted Clp homologue

1 reference

12 December 2020

Ubiquitin found in the archaebacterium Thermoplasma acidophilum

1 reference

12 December 2020

Degradation of Mos by the N-terminal proline (Pro2)-dependent ubiquitin pathway on fertilization of Xenopus eggs: possible significance of natural selection for Pro2 in Mos.

1 reference

12 December 2020

Early auxin-induced genes encode short-lived nuclear proteins

1 reference

12 December 2020

Liver mitochondria contain an ATP-dependent, vanadate-sensitive pathway for the degradation of proteins

1 reference

12 December 2020

Heavy-chain binding protein recognizes aberrant polypeptides translocated in vitro.

1 reference

12 December 2020

Purification and initial characterization of ubiquitin from the higher plant, Avena sativa

1 reference

12 December 2020

Induction and Regulation of Heat-Shock Gene Expression by an Amino Acid Analog in Soybean Seedlings

1 reference

12 December 2020

Stress resistance in Saccharomyces cerevisiae is strongly correlated with assembly of a novel type of multiubiquitin chain

1 reference

12 December 2020

Structure and evolution of genes encoding polyubiquitin and ubiquitin-like proteins in Arabidopsis thaliana ecotype Columbia.

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12 December 2020

Ubiquitin in the prokaryote Anabaena variabilis

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12 December 2020

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12 December 2020

Regulation of Protein Degradation

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12 December 2020

Hormonal regulation, processing, and secretion of cysteine proteinases in barley aleurone layers

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12 December 2020

A ubiquitin carrier protein from wheat germ is structurally and functionally similar to the yeast DNA repair enzyme encoded by RAD6

1 reference

12 December 2020

Novel vascular cell-specific genes whose expression is regulated temporally and spatially during vascular system development

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12 December 2020

Ubiquitin genes are differentially regulated in protoplast-derived cultures of Nicotiana sylvestris and in response to various stresses

1 reference

12 December 2020

Existence of a molecular ruler in proteasomes suggested by analysis of degradation products

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12 December 2020

Characterization of a polyubiquitin gene from Arabidopsis thaliana.

1 reference

12 December 2020

Characterization of cDNA for a dehydration-inducible gene that encodes a CLP A, B-like protein in Arabidopsis thaliana L.

1 reference

12 December 2020

The HPV-16 E6 and E6-AP complex functions as a ubiquitin-protein ligase in the ubiquitination of p53

1 reference

12 December 2020

Clp P represents a unique family of serine proteases.

1 reference

12 December 2020

Ubiquitin-phytochrome conjugates. Pool dynamics during in vivo phytochrome degradation.

1 reference

12 December 2020

In vivo half-life of a protein is a function of its amino-terminal residue

1 reference

12 December 2020

Prosomes (proteasomes) of higher plants

1 reference

12 December 2020

A polypeptide from tomato leaves induces wound-inducible proteinase inhibitor proteins.

1 reference

12 December 2020

Cloning of ubiquitin activating enzyme from wheat and expression of a functional protein in Escherichia coli

1 reference

12 December 2020

The ubiquitin-proteasome pathway is required for processing the NF-kappa B1 precursor protein and the activation of NF-kappa B

1 reference

12 December 2020

Arabidopsis MBP1 gene encodes a conserved ubiquitin recognition component of the 26S proteasome

1 reference

12 December 2020

Specific complex formation between yeast RAD6 and RAD18 proteins: a potential mechanism for targeting RAD6 ubiquitin-conjugating activity to DNA damage sites

1 reference

12 December 2020

The neuron-specific protein PGP 9.5 is a ubiquitin carboxyl-terminal hydrolase

1 reference

12 December 2020

Mechanisms and Functions of Cell Death

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12 December 2020

Neutral peptidases in the stroma of pea chloroplasts.

1 reference

12 December 2020

Ubiquitin is attached to membranes of baculovirus particles by a novel type of phospholipid anchor

1 reference

12 December 2020

Members of two gene families encoding ubiquitin-conjugating enzymes, AtUBC1-3 and AtUBC4-6, from Arabidopsis thaliana are differentially expressed.

1 reference

12 December 2020

Multiple forms of ubiquitin-activating enzyme E1 from wheat. Identification of an essential cysteine by in vitro mutagenesis

1 reference

12 December 2020

Isolation, characterization, and partial purification of a novel ubiquitin-protein ligase, E3. Targeting of protein substrates via multiple and distinct recognition signals and conjugating enzymes

1 reference

12 December 2020

The multicatalytic and 26 S proteases

1 reference

12 December 2020

Increased expression of the maize immunoglobulin binding protein homolog b-70 in three zein regulatory mutants

1 reference

12 December 2020

Calcium-activated neutral protease (calpain) system: structure, function, and regulation

1 reference

12 December 2020

A 26 S protease subunit that binds ubiquitin conjugates

1 reference

12 December 2020

The stroma of higher plant plastids contain ClpP and ClpC, functional homologs of Escherichia coli ClpP and ClpA: an archetypal two-component ATP-dependent protease.

1 reference

12 December 2020

Proteases and protein degradation inEscherichia coli

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12 December 2020

The ubiquitin-encoding multigene family of flax, Linum usitatissimum

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12 December 2020

Plant cells contain two functionally distinct vacuolar compartments

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12 December 2020

PA700, an ATP-dependent activator of the 20 S proteasome, is an ATPase containing multiple members of a nucleotide-binding protein family

1 reference

12 December 2020

Ubiquitination of a yeast plasma membrane receptor signals its ligand-stimulated endocytosis

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12 December 2020

Gene expression patterns associated with in vitro tracheary element formation in isolated single mesophyll cells of Zinnia elegans

1 reference

12 December 2020

A role for a 70-kilodalton heat shock protein in lysosomal degradation of intracellular proteins

1 reference

12 December 2020

Cloning and sequence analysis of a cDNA clone from Arabidopsis thaliana homologous to a proteasome alpha subunit from Drosophila.

1 reference

12 December 2020

Control of cell fate by a deubiquitinating enzyme encoded by the fat facets gene.

1 reference

12 December 2020

Conservation of the regulatory subunit for the Clp ATP-dependent protease in prokaryotes and eukaryotes

1 reference

12 December 2020

Heat-inducible degron: a method for constructing temperature-sensitive mutants.

1 reference

12 December 2020

Role of a peptide tagging system in degradation of proteins synthesized from damaged messenger RNA

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12 December 2020

Characterization of a prolyl endopeptidase from spinach thylakoids

1 reference

12 December 2020

Defective mitosis due to a mutation in the gene for a fission yeast 26S proteasesubunit

1 reference

12 December 2020

The Pichia pastoris PAS4 gene encodes a ubiquitin-conjugating enzyme required for peroxisome assembly.

1 reference

12 December 2020

The interferon-inducible 15-kDa ubiquitin homolog conjugates to intracellular proteins

1 reference

12 December 2020

Proteolysis, proteasomes and antigen presentation

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12 December 2020

Early hydrogen-bonding events in the folding reaction of ubiquitin

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12 December 2020

Production of abnormal proteins in E. coli stimulates transcription of lon and other heat shock genes

1 reference

12 December 2020

A major ubiquitin conjugation system in wheat germ extracts involves a 15-kDa ubiquitin-conjugating enzyme (E2) homologous to the yeast UBC4/UBC5 gene products

1 reference

12 December 2020

Ubiquitin extension proteins of Arabidopsis thaliana. Structure, localization, and expression of their promoters in transgenic tobacco.

1 reference

12 December 2020

The ubiquitin-conjugation system

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12 December 2020

Novel applications of the ubiquitin-dependent proteolytic pathway in plant genetic engineering

1 reference

12 December 2020

A ubiquitin mutant with specific defects in DNA repair and multiubiquitination

1 reference

12 December 2020

Cucumisin, a serine protease from melon fruits, shares structural homology with subtilisin and is generated from a large precursor.

1 reference

12 December 2020

Functional Implications of the Subcellular Localization of Ethylene-Induced Chitinase and [beta]-1,3-Glucanase in Bean Leaves.

1 reference

12 December 2020

An Arabidopsis peptide transporter is a member of a new class of membrane transport proteins

1 reference

12 December 2020

Red light-induced formation of ubiquitin-phytochrome conjugates: Identification of possible intermediates of phytochrome degradation.

1 reference

12 December 2020

A family of proteins structurally and functionally related to the E6-AP ubiquitin-protein ligase

1 reference

12 December 2020

High performance liquid chromatography resolution of ubiquitin pathway enzymes from wheat germ.

1 reference

12 December 2020

The N-end rule in bacteria.

1 reference

12 December 2020

The Apparent Turnover of 1-Aminocyclopropane-1-Carboxylate Synthase in Tomato Cells Is Regulated by Protein Phosphorylation and Dephosphorylation

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12 December 2020

Regulation of V(D)J recombination activator protein RAG-2 by phosphorylation

1 reference

12 December 2020

Red light-induced accumulation of ubiquitin-phytochrome conjugates in both monocots and dicots

1 reference

12 December 2020

Arabidopsis homeotic gene APETALA3 ectopic expression: transcriptional and posttranscriptional regulation determine floral organ identity

1 reference

12 December 2020

Calcium-dependent proteinase activity in root cultures of Arabidopsis.

1 reference

12 December 2020

An Arabidopsis gene homologous to mammalian and insect genes encoding the largest proteasome subunit.

1 reference

12 December 2020

Multiple ubiquitin-conjugating enzymes participate in the in vivo degradation of the yeast MAT alpha 2 repressor

1 reference

12 December 2020

Control of I kappa B-alpha proteolysis by site-specific, signal-induced phosphorylation

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12 December 2020

Molecular determinants of protein half-lives in eukaryotic cells

1 reference

12 December 2020

A nodule-specific gene encoding a subtilisin-like protease is expressed in early stages of actinorhizal nodule development.

1 reference

12 December 2020

PRE2, highly homologous to the human major histocompatibility complex-linked RING10 gene, codes for a yeast proteasome subunit necessary for chrymotryptic activity and degradation of ubiquitinated proteins.

1 reference

12 December 2020

The first characterization of a eubacterial proteasome: the 20S complex of Rhodococcus.

1 reference

12 December 2020

Identifiers

DOI

10.1007/BF00039386

1 reference

PubMed ID

8980483

Dimensions Publication ID

29 September 2017

0 references

1 reference

PubMed ID

8980483