(Q42737217)

6 November 2017

Network enrichment analysis in complex experiments (English)

1 reference

6 November 2017

Ali Shojaie

1

1 reference

PMCID

2898649

6 November 2017

George Michailidis

series ordinal

2

1 reference

6 November 2017

22 May 2010

1 reference

Statistical Applications in Genetics and Molecular Biology

6 November 2017

1 reference

6 November 2017

9

1 reference

6 November 2017

Article22

1 reference

PMCID

2898649

maintained by WikiProject

6 November 2017

WikiProject Mathematics

0 references

cites work

Penalized likelihood methods for estimation of sparse high-dimensional directed acyclic graphs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2898649

Analysis of gene sets based on the underlying regulatory network

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2898649

Incorporating gene networks into statistical tests for genomic data via a spatially correlated mixture model

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2898649

An improved, bias-reduced probabilistic functional gene network of baker's yeast, Saccharomyces cerevisiae

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2898649

A Markov random field model for network-based analysis of genomic data

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2898649

Calculating the statistical significance of changes in pathway activity from gene expression data

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2898649

Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2898649

Discovering statistically significant pathways in expression profiling studies

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2898649

Transcriptional regulatory code of a eukaryotic genome

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2898649

The genomics of yeast responses to environmental stress and starvation

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2898649

Discovering regulatory and signalling circuits in molecular interaction networks

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2898649

Design issues for cDNA microarray experiments

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2898649

Integrated genomic and proteomic analyses of a systematically perturbed metabolic network

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2898649

Remodeling of yeast genome expression in response to environmental changes

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2898649

Genomic expression programs in the response of yeast cells to environmental changes

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2898649

Gene ontology: tool for the unification of biology

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2898649

MMG: a probabilistic tool to identify submodules of metabolic pathways.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2898649

A hidden Markov model-based approach for identifying timing differences in gene expression under different experimental factors.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2898649

Functional hierarchical models for identifying genes with different time-course expression profiles.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2898649

Statistical design and the analysis of gene expression microarray data

16 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20597848

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Experimental design for gene expression microarrays

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20597848

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.2202/1544-6115.1483

1 reference

6 November 2017

1 reference

6 November 2017

1 reference

PMCID

2898649