(Q42950586)

English

DNA replication timing is deterministic at the level of chromosomal domains but stochastic at the level of replicons in Xenopus egg extracts.

scientific article published on 2 September 2008

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scholarly article

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13 January 2020

DNA replication timing is deterministic at the level of chromosomal domains but stochastic at the level of replicons in Xenopus egg extracts (English)

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13 January 2020

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13 January 2020

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13 January 2020

author name string

Hélène Labit

1

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13 January 2020

Irène Perewoska

2

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13 January 2020

Kathrin Marheineke

5

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13 January 2020

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2 September 2008

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13 January 2020

Nucleic Acids Research

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13 January 2020

36

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13 January 2020

5623-5634

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13 January 2020

17

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13 January 2020

describes a project that uses

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11 June 2022

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In Xenopus egg extracts, DNA replication initiates preferentially at or near asymmetric AT sequences

1 reference

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DNA combing reveals intrinsic temporal disorder in the replication of yeast chromosome VI.

1 reference

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Cell cycle regulation of DNA replication.

1 reference

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Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

1 reference

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27 May 2018

Pan-S replication patterns and chromosomal domains defined by genome-tiling arrays of ENCODE genomic areas

1 reference

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27 May 2018

Chk1 regulates the density of active replication origins during the vertebrate S phase.

1 reference

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alpha-Synuclein and its disease-related mutants interact differentially with the microtubule protein tau and associate with the actin cytoskeleton

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Replication foci dynamics: replication patterns are modulated by S-phase checkpoint kinases in fission yeast.

1 reference

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27 May 2018

DNA replication timing: random thoughts about origin firing

1 reference

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27 May 2018

The temporal program of DNA replication: new insights into old questions

1 reference

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27 May 2018

Topoisomerase II-DNA complexes trapped by ICRF-193 perturb chromatin structure.

1 reference

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27 May 2018

Replication timing of human chromosome 6.

1 reference

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27 May 2018

Coordination of replication and transcription along a Drosophila chromosome.

1 reference

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27 May 2018

DNA replication-timing analysis of human chromosome 22 at high resolution and different developmental states

1 reference

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27 May 2018

The chromatin remodeling complex NoRC controls replication timing of rRNA genes

1 reference

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27 May 2018

MCM proteins and checkpoint kinases get together at the fork

1 reference

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27 May 2018

The dynamics of chromosome replication in yeast

1 reference

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27 May 2018

Xenopus origin recognition complex (ORC) initiates DNA replication preferentially at sequences targeted by Schizosaccharomyces pombe ORC.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553594

27 May 2018

Spatial distribution and specification of mammalian replication origins during G1 phase

1 reference

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27 May 2018

Establishment of transcriptional competence in early and late S phase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553594

27 May 2018

Replication origins in Xenopus egg extract Are 5-15 kilobases apart and are activated in clusters that fire at different times

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553594

27 May 2018

Replication fork density increases during DNA synthesis in X. laevis egg extracts.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553594

27 May 2018

Presence of pre-rRNAs before activation of polymerase I transcription in the building process of nucleoli during early development of Xenopus laevis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553594

27 May 2018

Chromosomal replication initiates and terminates at random sequences but at regular intervals in the ribosomal DNA of Xenopus early embryos

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553594

27 May 2018

Early events in DNA replication require cyclin E and are blocked by p21CIP1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553594

27 May 2018

Compact structure of ribosomal chromatin in Xenopus laevis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553594

27 May 2018

A major developmental transition in early xenopus embryos: I. characterization and timing of cellular changes at the midblastula stage

1 reference

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27 May 2018

The control of DNA replication in a cell-free extract that recapitulates a basic cell cycle in vitro.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553594

27 May 2018

Replication occurs at discrete foci spaced throughout nuclei replicating in vitro.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553594

27 May 2018

DNA replication initiates at multiple sites on plasmid DNA in Xenopus egg extracts.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553594

27 May 2018

Plasmid replication in Xenopus eggs and egg extracts: a 2D gel electrophoretic analysis

1 reference

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27 May 2018

Sequence organization of the spacer DNA in a ribosomal gene unit of Xenopus laevis

1 reference

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27 May 2018

DNA replication origins fire stochastically in fission yeast

1 reference

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16 August 2018

Control of replication origin density and firing time in Xenopus egg extracts: role of a caffeine-sensitive, ATR-dependent checkpoint.

1 reference

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16 August 2018

Persistence length of chromatin determines origin spacing in Xenopus early-embryo DNA replication: quantitative comparisons between theory and experiment.

1 reference

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16 August 2018

Dynamics of DNA replication in mammalian somatic cells: nucleotide pool modulates origin choice and interorigin spacing.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553594

16 August 2018

Replication dynamics of the yeast genome.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553594

16 August 2018

Aphidicolin triggers a block to replication origin firing in Xenopus egg extracts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553594

16 August 2018

Mechanisms ensuring rapid and complete DNA replication despite random initiation in Xenopus early embryos

1 reference

https://pubmed.ncbi.nlm.nih.gov/18765475

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The spatial position and replication timing of chromosomal domains are both established in early G1 phase

1 reference

https://pubmed.ncbi.nlm.nih.gov/18765475

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transition in specification of embryonic metazoan DNA replication origins

1 reference

https://pubmed.ncbi.nlm.nih.gov/18765475

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A distinct G1 step required to specify the Chinese hamster DHFR replication origin

1 reference

https://pubmed.ncbi.nlm.nih.gov/18765475

12 December 2020

based on heuristic

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Identifiers

10.1093/NAR/GKN533

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13 January 2020

release_pivqlixrg5eslpal6qev6ovg7y

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24 November 2022

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mapped directly with Wikidata item

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13 January 2020

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13 January 2020

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