(Q42983940)

English

An asymmetric underlying rule in the assignment of codons: possible clue to a quick early evolution of the genetic code via successive binary choices

scientific article published on 12 December 2006

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scholarly article

1 reference

Europe PubMed Central

12 November 2017

An asymmetric underlying rule in the assignment of codons: possible clue to a quick early evolution of the genetic code via successive binary choices (English)

1 reference

Europe PubMed Central

12 November 2017

author name string

Marc Delarue

1

1 reference

Europe PubMed Central

12 November 2017

language of work or name

0 references

publication date

12 December 2006

1 reference

Europe PubMed Central

12 November 2017

1 reference

Europe PubMed Central

12 November 2017

13

1 reference

Europe PubMed Central

12 November 2017

161-169

1 reference

Europe PubMed Central

12 November 2017

2

1 reference

Europe PubMed Central

12 November 2017

The A-minor motifs in the decoding recognition process

1 reference

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Collective evolution and the genetic code

1 reference

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Molecular mimicry: quantitative methods to study structural similarity between protein and RNA

1 reference

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26 May 2018

Origins of the genetic code: the escaped triplet theory.

1 reference

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26 May 2018

The origin of the genetic code: theories and their relationships, a review

1 reference

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26 May 2018

A unified model of codon reassignment in alternative genetic codes

1 reference

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An aminoacyl-tRNA synthetase that specifically activates pyrrolysine

1 reference

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26 May 2018

Artificially ambiguous genetic code confers growth yield advantage

1 reference

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26 May 2018

Why nature chose A, C, G and U/T: an error-coding perspective of nucleotide alphabet composition

1 reference

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26 May 2018

The antiquity of RNA-based evolution

1 reference

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Class I tyrosyl-tRNA synthetase has a class II mode of cognate tRNA recognition

1 reference

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26 May 2018

Pyrrolysine encoded by UAG in Archaea: charging of a UAG-decoding specialized tRNA.

1 reference

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26 May 2018

Aminoacyl-tRNA synthetases: potential markers of genetic code development

1 reference

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Translation: in retrospect and prospect

1 reference

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Aminoacyl-tRNA synthetases, the genetic code, and the evolutionary process

1 reference

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26 May 2018

Evolution of aminoacyl-tRNA synthetases--analysis of unique domain architectures and phylogenetic trees reveals a complex history of horizontal gene transfer events.

1 reference

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26 May 2018

Selection, history and chemistry: the three faces of the genetic code.

1 reference

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26 May 2018

The accessory subunit of Xenopus laevis mitochondrial DNA polymerase gamma increases processivity of the catalytic subunit of human DNA polymerase gamma and is related to class II aminoacyl-tRNA synthetases

1 reference

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26 May 2018

Selective advantages created by codon ambiguity allowed for the evolution of an alternative genetic code in Candida spp.

1 reference

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26 May 2018

The genetic code is one in a million

1 reference

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Protein folding in the hydrophobic-hydrophilic (HP) model is NP-complete

1 reference

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26 May 2018

A supersymmetric model for the evolution of the genetic code

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1781368

26 May 2018

A euryarchaeal lysyl-tRNA synthetase: resemblance to class I synthetases

1 reference

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26 May 2018

Structural and functional considerations of the aminoacylation reaction

1 reference

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26 May 2018

Four primordial modes of tRNA-synthetase recognition, determined by the (G,C) operational code

1 reference

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26 May 2018

The crystal structure of phenylalanyl-tRNA synthetase from thermus thermophilus complexed with cognate tRNAPhe

1 reference

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26 May 2018

Comparing folding codes for proteins and polymers

1 reference

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26 May 2018

The presence of codon-anticodon pairs in the acceptor stem of tRNAs

1 reference

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26 May 2018

Why are the same protein folds used to perform different functions?

1 reference

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26 May 2018

The aminoacyl-tRNA synthetase family: modules at work

1 reference

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26 May 2018

An operational RNA code for amino acids and possible relationship to genetic code

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1781368

26 May 2018

Two types of aminoacyl-tRNA synthetases could be originally encoded by complementary strands of the same nucleic acid

1 reference

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26 May 2018

The genetic coding of protein structure.

1 reference

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26 May 2018

On the evolution of the genetic code

1 reference

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Order in the genetic code

1 reference

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26 May 2018

The origin of the genetic code

1 reference

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26 May 2018

Differentiated parental DNA strands confer developmental asymmetry on daughter cells in fission yeast.

1 reference

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26 May 2018

The phylogeny of tRNA sequences provides evidence for ambiguity reduction in the origin of the genetic code

1 reference

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Which organic compounds could have occurred on the prebiotic earth?

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26 May 2018

How old is the genetic code? Statistical geometry of tRNA provides an answer.

1 reference

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26 May 2018

Partition of tRNA synthetases into two classes based on mutually exclusive sets of sequence motifs

1 reference

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26 May 2018

Recognition of tRNA(Tyr) by tyrosyl-tRNA synthetase

1 reference

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26 May 2018

Sequence, structural and evolutionary relationships between class 2 aminoacyl-tRNA synthetases

1 reference

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26 May 2018

Position of aminoacylation of individual Escherichia coli and yeast tRNAs

1 reference

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26 May 2018

Site of aminoacylation of tRNAs from Escherichia coli with respect to the 2'- or 3'-hydroxyl group of the terminal adenosine

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1781368

26 May 2018

Amino acids are not all initially attached to the same position on transfer RNA molecules

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1781368

26 May 2018

A co-evolution theory of the genetic code

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1781368

26 May 2018

Distinct kinetic mechanisms of the two classes of Aminoacyl-tRNA synthetases.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1781368

16 August 2018

Breaking the stereo barrier of amino acid attachment to tRNA by a single nucleotide

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1781368

16 August 2018

Shape-selective RNA recognition by cysteinyl-tRNA synthetase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1781368

16 August 2018

Activation of the Pyrrolysine Suppressor tRNA Requires Formation of a Ternary Complex with Class I and Class II Lysyl-tRNA Synthetases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1781368

16 August 2018

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1 reference

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Increased frequency of cysteine, tyrosine, and phenylalanine residues since the last universal ancestor

1 reference

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16 August 2018

Analytic and algorithmic solution of random satisfiability problems.

1 reference

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16 August 2018

Emergence of highly designable protein-backbone conformations in an off-lattice model.

1 reference

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16 August 2018

Two classes of tRNA synthetases suggested by sterically compatible dockings on tRNA acceptor stem

1 reference

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16 August 2018

A computational approach to simplifying the protein folding alphabet.

1 reference

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Folding alphabets.

1 reference

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16 August 2018

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1 reference

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16 August 2018

Phylogenetic analysis of the aminoacyl-tRNA synthetases.

1 reference

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16 August 2018

The second genetic code

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1781368

1 December 2018

Searching tRNA sequences for relatedness to aminoacyl-tRNA synthetase families

1 reference

https://pubmed.ncbi.nlm.nih.gov/17164478

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transfer RNA paralogs: evidence for genetic code-amino acid biosynthesis coevolution and an archaeal root of life

1 reference

https://pubmed.ncbi.nlm.nih.gov/17164478

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Symmetry scheme for amino acid codons

1 reference

https://pubmed.ncbi.nlm.nih.gov/17164478

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Algebraic model for the evolution of the genetic code

1 reference

https://pubmed.ncbi.nlm.nih.gov/17164478

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1261/RNA.257607

1 reference

Europe PubMed Central

12 November 2017

1 reference

Europe PubMed Central

12 November 2017

1 reference

Europe PubMed Central

12 November 2017

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