(Q43105221)

English

Automated selection of positions determining functional specificity of proteins by comparative analysis of orthologous groups in protein families.

scientific article published in February 2004

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scholarly article

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14739328%20AND%20SRC:MED&resulttype=core&format=json

17 November 2019

Automated selection of positions determining functional specificity of proteins by comparative analysis of orthologous groups in protein families (English)

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14739328%20AND%20SRC:MED&resulttype=core&format=json

17 November 2019

1 reference

based on heuristic

inferred from title

Olga V Kalinina

1

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14739328%20AND%20SRC:MED&resulttype=core&format=json

17 November 2019

Mikhail Gelfand

3

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14739328%20AND%20SRC:MED&resulttype=core&format=json

17 November 2019

Aleksandra B Rakhmaninova

4

object named as

Aleksandra B Rakhmaninova

1 reference

Europe PubMed Central

17 November 2019

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14739328%20AND%20SRC:MED&resulttype=core&format=json

author name string

Andrey A Mironov

2

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14739328%20AND%20SRC:MED&resulttype=core&format=json

17 November 2019

publication date

1 February 2004

1 reference

Europe PubMed Central

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17 November 2019

Protein Science

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14739328%20AND%20SRC:MED&resulttype=core&format=json

17 November 2019

13

1 reference

Europe PubMed Central

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17 November 2019

443-456

1 reference

Europe PubMed Central

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17 November 2019

2

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14739328%20AND%20SRC:MED&resulttype=core&format=json

17 November 2019

The InterPro database, 2003 brings increased coverage and new features

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2286703

25 May 2018

Predicting functional divergence in protein evolution by site-specific rate shifts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2286703

25 May 2018

Role of residue 147 in the gene regulatory function of the Escherichia coli purine repressor

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2286703

25 May 2018

Structural basis of water-specific transport through the AQP1 water channel

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2286703

25 May 2018

Structure of a glycerol-conducting channel and the basis for its selectivity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2286703

25 May 2018

Structural determinants of water permeation through aquaporin-1

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2286703

25 May 2018

Predicting ligand-binding function in families of bacterial receptors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2286703

25 May 2018

The role of lysine 55 in determining the specificity of the purine repressor for its operators through minor groove interactions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2286703

25 May 2018

Biochemistry of coenzyme B12-dependent glycerol and diol dehydratases and organization of the encoding genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2286703

25 May 2018

Evolution of an enzyme active site: the structure of a new crystal form of muconate lactonizing enzyme compared with mandelate racemase and enolase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2286703

25 May 2018

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2286703

25 May 2018

Inferring phylogenies from protein sequences by parsimony, distance, and likelihood methods

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2286703

25 May 2018

An evolutionary trace method defines binding surfaces common to protein families

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2286703

25 May 2018

Detecting subtle sequence signals: a Gibbs sampling strategy for multiple alignment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2286703

25 May 2018

A method to predict functional residues in proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2286703

25 May 2018

Selection of DNA binding sites by regulatory proteins. Statistical-mechanical theory and application to operators and promoters.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2286703

25 May 2018

Mutant lac repressors with new specificities hint at rules for protein--DNA recognition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2286703

25 May 2018

The roles of residues 5 and 9 of the recognition helix of Lac repressor in lac operator binding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2286703

25 May 2018

Amino acid substitution matrices from protein blocks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2286703

25 May 2018

BATMAS30: amino acid substitution matrix for alignment of bacterial transporters.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2286703

15 August 2018

Using orthologous and paralogous proteins to identify specificity-determining residues in bacterial transcription factors.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2286703

15 August 2018

A phylogenetic framework for the aquaporin family in eukaryotes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2286703

15 August 2018

Functional characterization of a microbial aquaglyceroporin.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2286703

15 August 2018

Analysis and prediction of functional sub-types from protein sequence alignments.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2286703

15 August 2018

Identification of functional surfaces of the zinc binding domains of intracellular receptors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2286703

15 August 2018

Protein sequence alignments: a strategy for the hierarchical analysis of residue conservation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2286703

15 August 2018

Switch from an aquaporin to a glycerol channel by two amino acids substitution

1 reference

https://pubmed.ncbi.nlm.nih.gov/14739328

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

[Software for analyzing bacterial genomes]

1 reference

https://pubmed.ncbi.nlm.nih.gov/14739328

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1110/PS.03191704

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14739328%20AND%20SRC:MED&resulttype=core&format=json

17 November 2019

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14739328%20AND%20SRC:MED&resulttype=core&format=json

17 November 2019

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14739328%20AND%20SRC:MED&resulttype=core&format=json

17 November 2019

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