(Q45998325)

30 June 2018

title

Critical role of IRF1 and BATF in forming chromatin landscape during type 1 regulatory cell differentiation. (English)

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30 June 2018

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11

Aviv Regev

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30 June 2018

13

Dan Littman

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30 June 2018

Aaron Watters

8

object named as

Aaron Watters

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30 June 2018

Richard Bonneau

12

object named as

Richard Bonneau

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30 June 2018

Vijay Kuchroo

14

object named as

Vijay K Kuchroo

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30 June 2018

author name string

Katarzyna Karwacz

1

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30 June 2018

Emily R Miraldi

2

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30 June 2018

Maria Pokrovskii

3

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30 June 2018

Asaf Madi

4

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30 June 2018

Nir Yosef

5

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30 June 2018

Ivo Wortman

6

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30 June 2018

Xi Chen

7

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30 June 2018

Nicholas Carriero

9

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30 June 2018

Amit Awasthi

10

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30 June 2018

language of work or name

English

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publication date

6 February 2017

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30 June 2018

published in

Nature Immunology

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30 June 2018

volume

18

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30 June 2018

issue

4

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30 June 2018

page(s)

412-421

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30 June 2018

describes a project that uses

Jupyter notebook file

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1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5901650/

cites work

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3 July 2018

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Simultaneous generation of many RNA-seq libraries in a single reaction

3 July 2018

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3 July 2018

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Molecular regulation of effector and memory T cell differentiation

3 July 2018

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3 July 2018

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3 July 2018

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3 July 2018

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The transcription factor BATF operates as an essential differentiation checkpoint in early effector CD8+ T cells

3 July 2018

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3 July 2018

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Systematic discovery and characterization of regulatory motifs in ENCODE TF binding experiments

3 July 2018

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Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position

3 July 2018

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Expression of the immune regulator tripartite-motif 21 is controlled by IFN regulatory factors

3 July 2018

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Regulators of chromatin state and transcription in CD4 T-cell polarization

3 July 2018

1 reference

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3 July 2018

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3 July 2018

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A validated regulatory network for Th17 cell specification

3 July 2018

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BATF-JUN is critical for IRF4-mediated transcription in T cells

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5901650

A genomic regulatory element that directs assembly and function of immune-specific AP-1-IRF complexes

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5901650

Fast gapped-read alignment with Bowtie 2

3 July 2018

1 reference

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Induction of regulatory Tr1 cells and inhibition of T(H)17 cells by IL-27.

3 July 2018

1 reference

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Type 1 regulatory T cells (Tr1) in autoimmunity

3 July 2018

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The transcription factor BATF controls the global regulators of class-switch recombination in both B cells and T cells

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5901650

FIMO: scanning for occurrences of a given motif

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5901650

IL-27 induces the differentiation of Tr1-like cells from human naive CD4+ T cells via the phosphorylation of STAT1 and STAT3.

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5901650

The aryl hydrocarbon receptor interacts with c-Maf to promote the differentiation of type 1 regulatory T cells induced by IL-27.

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5901650

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3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5901650

The AP-1 transcription factor Batf controls T(H)17 differentiation

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5901650

Cutting edge: IL-27 induces the transcription factor c-Maf, cytokine IL-21, and the costimulatory receptor ICOS that coordinately act together to promote differentiation of IL-10-producing Tr1 cells

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5901650

Interleukin-10: new perspectives on an old cytokine

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5901650

A distal cis-regulatory element, CNS-9, controls NFAT1 and IRF4-mediated IL-10 gene activation in T helper cells

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5901650

Alterations in CD46-mediated Tr1 regulatory T cells in patients with multiple sclerosis

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5901650

Interleukin 27 limits autoimmune encephalomyelitis by suppressing the development of interleukin 17-producing T cells

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5901650

Interleukin-10-secreting type 1 regulatory T cells in rodents and humans.

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5901650

A role for IL-27 in early regulation of Th1 differentiation

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5901650

Chromatin-level regulation of the IL10 gene in T cells.

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5901650

Myelin oligodendrocyte glycoprotein-specific T cell receptor transgenic mice develop spontaneous autoimmune optic neuritis.

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5901650

In vitro generation of interleukin 10-producing regulatory CD4(+) T cells is induced by immunosuppressive drugs and inhibited by T helper type 1 (Th1)- and Th2-inducing cytokines.

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5901650

A dominant function for interleukin 27 in generating interleukin 10-producing anti-inflammatory T cells.

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5901650

Active repression of IFN regulatory factor-1-mediated transactivation by IFN regulatory factor-4.

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5901650

Egr-2 transcription factor is required for Blimp-1-mediated IL-10 production in IL-27-stimulated CD4+T cells

15 August 2018

1 reference

12 December 2020

Distal enhancer elements transcribe intergenic RNA in the IL-10 family gene cluster

1 reference

12 December 2020

Interferon regulatory factor 1 tryptophan 11 to arginine point mutation abolishes DNA binding

1 reference

12 December 2020

Suppressive effect of IL-27 on encephalitogenic Th17 cells and the effector phase of experimental autoimmune encephalomyelitis

1 reference

12 December 2020

IPython: A System for Interactive Scientific Computing

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNI.3683

7 January 2021

inferred from DOI database lookup

Python for Scientific Computing

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNI.3683

7 January 2021

inferred from DOI database lookup

Identifiers

DOI

10.1038/NI.3683

1 reference

30 June 2018

PMC publication ID

5901650

1 reference

30 June 2018

PubMed publication ID

28166218

1 reference

30 June 2018