(Q46018089)

19 June 2018

title

Proximity Biotinylation as a Method for Mapping Proteins Associated with mtDNA in Living Cells. (English)

1 reference

19 June 2018

main subject

FAST kinase domains 1

1 reference

GOA release 2020-03-11

author name string

Shuo Han

1

1 reference

19 June 2018

Namrata D Udeshi

2

1 reference

19 June 2018

Thomas J Deerinck

3

1 reference

19 June 2018

Tanya Svinkina

4

1 reference

19 June 2018

Mark H Ellisman

5

1 reference

19 June 2018

Steven A Carr

6

1 reference

19 June 2018

Alice Y Ting

7

1 reference

19 June 2018

publication date

23 February 2017

1 reference

19 June 2018

published in

Cell Chemical Biology

1 reference

19 June 2018

volume

24

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19 June 2018

issue

3

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19 June 2018

page(s)

404-414

1 reference

19 June 2018

describes a project that uses

ImageJ

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC5886301/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

cites work

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Mitochondrial Protein Interaction Mapping Identifies Regulators of Respiratory Chain Function

22 June 2018

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ER-mitochondria contacts couple mtDNA synthesis with mitochondrial division in human cells

22 June 2018

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22 June 2018

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Accessory NUMM (NDUFS6) subunit harbors a Zn-binding site and is essential for biogenesis of mitochondrial complex I.

22 June 2018

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A mitochondria-specific isoform of FASTK is present in mitochondrial RNA granules and regulates gene expression and function.

22 June 2018

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Whole cell formaldehyde cross-linking simplifies purification of mitochondrial nucleoids and associated proteins involved in mitochondrial gene expression

22 June 2018

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22 June 2018

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22 June 2018

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Proteomic mapping of the human mitochondrial intermembrane space in live cells via ratiometric APEX tagging.

22 June 2018

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22 June 2018

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Initial steps in RNA processing and ribosome assembly occur at mitochondrial DNA nucleoids

22 June 2018

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Metabolic enzyme expression highlights a key role for MTHFD2 and the mitochondrial folate pathway in cancer

22 June 2018

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Replication factors transiently associate with mtDNA at the mitochondrial inner membrane to facilitate replication

22 June 2018

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The mitochondrial nucleoid: integrating mitochondrial DNA into cellular homeostasis

22 June 2018

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GRSF1 regulates RNA processing in mitochondrial RNA granules.

22 June 2018

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The mitochondrial RNA-binding protein GRSF1 localizes to RNA granules and is required for posttranscriptional mitochondrial gene expression

22 June 2018

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Proteomic mapping of mitochondria in living cells via spatially restricted enzymatic tagging.

22 June 2018

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Engineered ascorbate peroxidase as a genetically encoded reporter for electron microscopy

22 June 2018

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A chemical screen probing the relationship between mitochondrial content and cell size

22 June 2018

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Correlative 3D superresolution fluorescence and electron microscopy reveal the relationship of mitochondrial nucleoids to membranes

22 June 2018

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22 June 2018

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A promiscuous biotin ligase fusion protein identifies proximal and interacting proteins in mammalian cells

22 June 2018

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Defects in mitochondrial DNA replication and human disease

22 June 2018

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MINOS1 is a conserved component of mitofilin complexes and required for mitochondrial function and cristae organization

22 June 2018

1 reference

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Superresolution fluorescence imaging of mitochondrial nucleoids reveals their spatial range, limits, and membrane interaction

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5886301

Identification of a de novo thymidylate biosynthesis pathway in mammalian mitochondria

22 June 2018

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Fast kinase domain-containing protein 3 is a mitochondrial protein essential for cellular respiration

22 June 2018

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Human ERAL1 is a mitochondrial RNA chaperone involved in the assembly of the 28S small mitochondrial ribosomal subunit

22 June 2018

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Human mitochondrial transcription revisited: only TFAM and TFB2M are required for transcription of the mitochondrial genes in vitro

22 June 2018

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Tid1 is a new regulator of p53 mitochondrial translocation and apoptosis in cancer

22 June 2018

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An ER-mitochondria tethering complex revealed by a synthetic biology screen

22 June 2018

1 reference

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Mitochondrial nucleoids undergo remodeling in response to metabolic cues.

22 June 2018

1 reference

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The layered structure of human mitochondrial DNA nucleoids

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5886301

Expression of catalytic mutants of the mtDNA helicase Twinkle and polymerase POLG causes distinct replication stalling phenotypes.

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5886301

Aconitase couples metabolic regulation to mitochondrial DNA maintenance

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5886301

Reconstitution of a minimal mtDNA replisome in vitro

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5886301

The functional organization of mitochondrial genomes in human cells

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5886301

The ratio of oxidative phosphorylation complexes I-V in bovine heart mitochondria and the composition of respiratory chain supercomplexes

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5886301

Human mitochondrial DNA deletions associated with mutations in the gene encoding Twinkle, a phage T7 gene 4-like protein localized in mitochondria

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5886301

Identification of a nuclear gene (FMC1) required for the assembly/stability of yeast mitochondrial F(1)-ATPase in heat stress conditions

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5886301

In organello formaldehyde crosslinking of proteins to mtDNA: identification of bifunctional proteins

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5886301

Molecular characterization of mitochondrial trifunctional protein deficiency: formation of the enzyme complex is important for stabilization of both alpha- and beta-subunits

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5886301

Yeast mitochondrial NAD(+)-dependent isocitrate dehydrogenase is an RNA-binding protein

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5886301

Mitochondrial DNA Replication Defects Disturb Cellular dNTP Pools and Remodel One-Carbon Metabolism

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5886301

Measuring mRNA decay in human mitochondria

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5886301

Human mitochondrial DNA nucleoids are linked to protein folding machinery and metabolic enzymes at the mitochondrial inner membrane.

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5886301

10.1016/J.CHEMBIOL.2017.02.002

15 August 2018

Identifiers

DOI

1 reference

19 June 2018

PMC publication ID

5886301

1 reference

19 June 2018

PubMed publication ID

28238724

1 reference

19 June 2018