(Q46394123)

21 December 2017

title

A segment-based approach to protein secondary structure prediction (English)

1 reference

protein structure prediction

11 November 2022

main subject

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0 references

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11 November 2022

3

Cohen FE

1 reference

21 December 2017

S. R. Presnell

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A1734974

reference URL

11 November 2022

B. I. Cohen

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A1734974

reference URL

11 November 2022

language of work or name

English

0 references

publication date

1 February 1992

1 reference

21 December 2017

4 February 1992

1 reference

National Center for Biotechnology Information

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=1734974

reference URL

full work available at URL

11 November 2022

https://pubs.acs.org/doi/pdf/10.1021/bi00119a006

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11 November 2022

1 reference

21 December 2017

volume

31

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21 December 2017

page(s)

983-993

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21 December 2017

issue

4

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21 December 2017

7

25

80

Arutyunyan E. G.

1980

1 reference

Structure of calmodulin refined at 2.2 A resolution

11 November 2022

8

1 reference

The Protein Data Bank: a computer-based archival file for macromolecular structures

11 November 2022

9

1 reference

Identification of protein folds: matching hydrophobicity patterns of sequence sets with solvent accessibility patterns of known structures

11 November 2022

11

1 reference

Crystal structure of Azotobacter cytochrome c5 at 2.5 A resolution

11 November 2022

12

1 reference

Conformational parameters for amino acids in helical, beta-sheet, and random coil regions calculated from proteins

11 November 2022

13

1 reference

Empirical Predictions of Protein Conformation

11 November 2022

14

1 reference

Protein folding: Evaluation of some simple rules for the assembly of helices into tertiary structures with myoglobin as an example

11 November 2022

17

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Analysis and prediction of protein beta-sheet structures by a combinatorial approach

11 November 2022

18

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Analysis and prediction of the packing of alpha-helices against a beta-sheet in the tertiary structure of globular proteins

11 November 2022

19

1 reference

Turn prediction in proteins using a pattern-matching approach

11 November 2022

20

1 reference

An algorithm for protein secondary structure prediction based on class prediction.

11 November 2022

21

1 reference

The crystal structure of human deoxyhaemoglobin at 1.74 A resolution

11 November 2022

22

1 reference

Structure of ferricytochrome c' from Rhodospirillum molischianum at 1.67 A resolution

11 November 2022

25

1 reference

Structure of human foetal deoxyhaemoglobin

11 November 2022

26

1 reference

Analysis of the accuracy and implications of simple methods for predicting the secondary structure of globular proteins

11 November 2022

27

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Further developments of protein secondary structure prediction using information theory. New parameters and consideration of residue pairs

11 November 2022

28

1 reference

Phase diagram for acidic conformational states of apomyoglobin

11 November 2022

29

1 reference

Protein secondary structure prediction with a neural network

11 November 2022

30

1 reference

Refinement of a molecular model for lamprey hemoglobin from Petromyzon marinus

11 November 2022

31

1 reference

Structural characterization of a partly folded apomyoglobin intermediate

11 November 2022

32

1 reference

Protein secondary structure and circular dichroism: a practical guide

11 November 2022

33

1 reference

Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

11 November 2022

34

1 reference

On the use of sequence homologies to predict protein structure: identical pentapeptides can have completely different conformations

11 November 2022

35

1 reference

The internal dynamics of globular proteins.

11 November 2022

36

1 reference

Prediction of protein structural class from the amino acid sequence

11 November 2022

37

1 reference

Improvements in protein secondary structure prediction by an enhanced neural network

11 November 2022

38

1 reference

Flexibility of the DNA-binding domains of trp repressor

11 November 2022

39

1 reference

Improvement of the 2.5 A resolution model of cytochrome b562 by redetermining the primary structure and using molecular graphics

11 November 2022

40

1 reference

Determination of protein secondary structure using factor analysis of infrared spectra

11 November 2022

41

1 reference

Improvements in a secondary structure prediction method based on a search for local sequence homologies and its use as a model building tool

11 November 2022

42

1 reference

Computer simulation of protein folding

11 November 2022

43

1 reference

Structural patterns in globular proteins

11 November 2022

44

1 reference

Structural principles of the globular organization of protein chains. A stereochemical theory of globular protein secondary structure.

11 November 2022

45

1 reference

Algorithms for prediction of alpha-helical and beta-structural regions in globular proteins

11 November 2022

46

1 reference

Comparison of the predicted and observed secondary structure of T4 phage lysozyme

11 November 2022

47

1 reference

Dynamics of folded proteins

11 November 2022

48

1 reference

Refinement of the structure of carp muscle calcium-binding parvalbumin by model building and difference fourier analysis

11 November 2022

49

1 reference

Logical analysis of the mechanism of protein folding. I. Predictions of helices, loops and beta-structures from primary structure.

11 November 2022

50

1 reference

Logical analysis of the mechanism of protein folding II. The nucleation process

11 November 2022

51

1 reference

Visualization of protein-nucleic acid interactions in a virus. Refined structure of intact tobacco mosaic virus at 2.9 A resolution by X-ray fiber diffraction

11 November 2022

52

1 reference

11 November 2022

Protein folding

53

1 reference

Amino acid sequence homology applied to the prediction of protein secondary structures, and joint prediction with existing methods

11 November 2022

54

1 reference

Structure of rice ferricytochrome c at 2·0 Å resolution

11 November 2022

55

1 reference

Neutron diffraction reveals oxygen–histidine hydrogen bond in oxymyoglobin

11 November 2022

56

1 reference

Topological distribution of four-alpha-helix bundles

11 November 2022

57

1 reference

Evidence for a molten globule state as a general intermediate in protein folding

11 November 2022

58

1 reference

Predicting the secondary structure of globular proteins using neural network models

11 November 2022

59

1 reference

Comparison of super-secondary structures in proteins

11 November 2022

60

1 reference

Hydrophobic organization of membrane proteins

11 November 2022

61

1 reference

Crystallographic refinement and atomic models of two different forms of citrate synthase at 2.7 and 1.7 A resolution

11 November 2022

62

1 reference

Identification of structural motifs from protein coordinate data: secondary structure and first-level supersecondary structure

11 November 2022

63

1 reference

Amino acid preferences for specific locations at the ends of alpha helices

11 November 2022

64

1 reference

Packing of α-helices: Geometrical constraints and contact areas

11 November 2022

65

1 reference

Structural characterization of folding intermediates in cytochrome c by H-exchange labelling and proton NMR.

11 November 2022

66

1 reference

Correlation of amino acid sequence and conformation in tobacco mosaic virus

11 November 2022

67

1 reference

A critical evaluation of methods for prediction of protein secondary structures

11 November 2022

68

1 reference

Capping and alpha-helix stability

11 November 2022

70

1 reference

Amino acid composition and hydrophobicity patterns of protein domains correlate with their structures.

11 November 2022

71

1 reference

Monte Carlo simulation of equilibrium globular protein folding: alpha-helical bundles with long loops

11 November 2022

72

1 reference

Describing protein structure: a general algorithm yielding complete helicoidal parameters and a unique overall axis.

11 November 2022

73

1 reference

Computer simulations of globular protein folding and tertiary structure.

11 November 2022

74

1 reference

Simulations of the folding of a globular protein.

11 November 2022

75

1 reference

Automatic generation of primary sequence patterns from sets of related protein sequences

11 November 2022

76

1 reference

Structure of erythrocruorin in different ligand states refined at 1·4 Å resolution

11 November 2022

77

1 reference

A sequence motif in the transmembrane region of growth factor receptors with tyrosine kinase activity mediates dimerization

11 November 2022

79

1 reference

NMR evidence for an early framework intermediate on the folding pathway of ribonuclease A

11 November 2022

81

1 reference

Structure of bacteriophage T4 lysozyme refined at 1.7 A resolution

11 November 2022

82

1 reference

A new force field for molecular mechanical simulation of nucleic acids and proteins

11 November 2022

83

1 reference

11 November 2022

Identifiers

DOI

10.1021/BI00119A006

1 reference

21 December 2017

1 reference

21 December 2017