(Q48079822)

8 February 2018

title

EGENES: transcriptome-based plant database of genes with metabolic pathway information and expressed sequence tag indices in KEGG. (English)

1 reference

8 February 2018

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Yuki Moriya

6

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Shuichi Kawashima

object named as

Shuichi Kawashima

5

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Ruy Jauregui

object named as

Ruy Jauregui

3

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author name string

Ali Masoudi-Nejad

1

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8 February 2018

Susumu Goto

2

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8 February 2018

Masumi Ito

4

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8 February 2018

Takashi R Endo

7

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8 February 2018

Minoru Kanehisa

8

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8 February 2018

language of work or name

English

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publication date

27 April 2007

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8 February 2018

published in

Plant Physiology

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8 February 2018

volume

144

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8 February 2018

page(s)

857-866

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8 February 2018

issue

2

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8 February 2018

Creative Commons Attribution 4.0 International

copyright license

start time

25 January 2021

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

EGassembler: online bioinformatics service for large-scale processing, clustering and assembling ESTs and genomic DNA fragments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1914165

Oryzabase. An integrated biological and genome information database for rice

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1914165

From genomics to chemical genomics: new developments in KEGG

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1914165

The Genomes On Line Database (GOLD) v.2: a monitor of genome projects worldwide

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1914165

CLU: a new algorithm for EST clustering

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1914165

Plant genome resources at the national center for biotechnology information.

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1914165

Plant protein annotation in the UniProt knowledgebase

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1914165

MetaCyc and AraCyc. Metabolic pathway databases for plant research

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1914165

Masking repeats while clustering ESTs

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1914165

ECgene: genome-based EST clustering and gene modeling for alternative splicing

26 August 2018

1 reference

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The TIGR Gene Indices: clustering and assembling EST and known genes and integration with eukaryotic genomes

26 August 2018

1 reference

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CR-EST: a resource for crop ESTs

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1914165

MetaCyc: a multiorganism database of metabolic pathways and enzymes.

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1914165

The KEGG resource for deciphering the genome

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1914165

AraCyc: a biochemical pathway database for Arabidopsis

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1914165

Gramene, a tool for grass genomics

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1914165

LIGAND: database of chemical compounds and reactions in biological pathways

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1914165

STACK: Sequence Tag Alignment and Consensus Knowledgebase

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1914165

An optimized protocol for analysis of EST sequences

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1914165

Base-calling of automated sequencer traces using phred. I. Accuracy assessment

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1914165

EcoCyc: Encyclopedia of Escherichia coli genes and metabolism

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1914165

A database for post-genome analysis

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1914165

A Gene Map of the Human Genome

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1914165

GrainGenes 2.0. an improved resource for the small-grains community

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1914165

2 November 2018

Identifiers

DOI

10.1104/PP.106.095059

1 reference

8 February 2018

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1 reference

8 February 2018