(Q48693717)

14 February 2018

title

The binding affinities of proteins interacting with the PDZ domain of PICK1. (English)

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14 February 2018

Kumlesh K Dev

5

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Özlem Keskin

3

object named as

Ozlem Keskin

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14 February 2018

author name string

Ashini Bolia

1

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14 February 2018

Z Nevin Gerek

2

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14 February 2018

Sefika Banu Ozkan

4

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14 February 2018

language of work or name

English

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publication date

24 February 2012

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14 February 2018

published in

Proteins

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14 February 2018

volume

80

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14 February 2018

issue

5

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14 February 2018

page(s)

1393-1408

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14 February 2018

Evidence for PDZ domains in bacteria, yeast, and plants

cites work

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

PDZ domains: folding and binding

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

PDZ domains and the organization of supramolecular complexes

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

Calcium-permeable AMPA receptor plasticity is mediated by subunit-specific interactions with PICK1 and NSF.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

PICK1 is a calcium-sensor for NMDA-induced AMPA receptor trafficking

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

Lipid binding regulates synaptic targeting of PICK1, AMPA receptor trafficking, and synaptic plasticity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

Interaction of the AMPA receptor subunit GluR2/3 with PDZ domains regulates hippocampal long-term depression.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

PICK1 and phosphorylation of the glutamate receptor 2 (GluR2) AMPA receptor subunit regulates GluR2 recycling after NMDA receptor-induced internalization.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

An essential role for PICK1 in NMDA receptor-dependent bidirectional synaptic plasticity

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

Clustering of AMPA receptors by the synaptic PDZ domain-containing protein PICK1

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

Cerebellar long-term depression requires PKC-regulated interactions between GluR2/3 and PDZ domain-containing proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

Inhibition of Arp2/3-mediated actin polymerization by PICK1 regulates neuronal morphology and AMPA receptor endocytosis

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

Mitochondrial anchoring of PKCalpha by PICK1 confers resistance to etoposide-induced apoptosis

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

Specific interaction of the PDZ domain protein PICK1 with the COOH terminus of protein kinase C-alpha

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

PICK1 uncoupling from mGluR7a causes absence-like seizures

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

Knock-in mice lacking the PDZ-ligand motif of mGluR7a show impaired PKC-dependent autoinhibition of glutamate release, spatial working memory deficits, and increased susceptibility to pentylenetetrazol.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

Protein kinase C stimulates the acid-sensing ion channel ASIC2a via the PDZ domain-containing protein PICK1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

Specific involvement in neuropathic pain of AMPA receptors and adapter proteins for the GluR2 subunit

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

PICK1-mediated GluR2 endocytosis contributes to cellular injury after neuronal trauma.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

PICK1-mediated glutamate receptor subunit 2 (GluR2) trafficking contributes to cell death in oxygen/glucose-deprived hippocampal neurons

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

Parkin-mediated monoubiquitination of the PDZ protein PICK1 regulates the activity of acid-sensing ion channels

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

Lamina-specific abnormalities of AMPA receptor trafficking and signaling molecule transcripts in the prefrontal cortex in schizophrenia

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

Genetic association studies of methamphetamine use disorders: A systematic review and synthesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

The schizophrenic faces of PICK1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

mRNA expression of AMPA receptors and AMPA receptor binding proteins in the cerebral cortex of elderly schizophrenics

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

Serine racemase binds to PICK1: potential relevance to schizophrenia

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

Region-specific alterations in glutamate receptor expression and subcellular distribution following extinction of cocaine self-administration

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

PICK1 is not a susceptibility gene for schizophrenia in a Japanese population: association study in a large case-control population.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

STRING 8--a global view on proteins and their functional interactions in 630 organisms

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

Structure of PICK1 and other PDZ domains obtained with the help of self-binding C-terminal extensions

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

Molecular determinants for the complex binding specificity of the PDZ domain in PICK1

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

The PDZ domain of PICK1 differentially accepts protein kinase C-alpha and GluR2 as interacting ligands.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

Identification of a small-molecule inhibitor of the PICK1 PDZ domain that inhibits hippocampal LTP and LTD.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

Structure-activity relationships of a small-molecule inhibitor of the PDZ domain of PICK1

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

21 January 2018

The Protein Data Bank

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

Manipulation of Conformational Change in Proteins by Single-Residue Perturbations

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

RosettaLigand docking with full ligand and receptor flexibility.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

ROSETTALIGAND: protein-small molecule docking with full side-chain flexibility.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

Knowledge-based scoring function to predict protein-ligand interactions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

Identification of computational hot spots in protein interfaces: combining solvent accessibility and inter-residue potentials improves the accuracy.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

HotPoint: hot spot prediction server for protein interfaces

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

Prediction of protein-protein interactions by combining structure and sequence conservation in protein interfaces

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

PRISM: protein interactions by structural matching

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

UCSF Chimera--a visualization system for exploratory research and analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

Membrane localization is critical for activation of the PICK1 BAR domain

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

Clustering and synaptic targeting of PICK1 requires direct interaction between the PDZ domain and lipid membranes

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

Zinc binding site in PICK1 is dominantly located at the CPC motif of its PDZ domain

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

A hot spot of binding energy in a hormone-receptor interface

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

Interaction between the glutamate transporter GLT1b and the synaptic PDZ domain protein PICK1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

Constrained geometric simulation of diffusive motion in proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

Evolutionarily conserved pathways of energetic connectivity in protein families

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

Mapping of two networks of residues that exhibit structural and dynamical changes upon binding in a PDZ domain protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

Signaling pathways of PDZ2 domain: a molecular dynamics interaction correlation analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

Structure-based prediction of the peptide sequence space recognized by natural and synthetic PDZ domains

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

Making protein interactions druggable: targeting PDZ domains

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24034

21 January 2018

Identifiers

DOI

10.1002/PROT.24034

1 reference

14 February 2018

1 reference

14 February 2018