(Q50713107)

18 March 2018

title

Anisotropic network model: systematic evaluation and a new web interface. (English)

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18 March 2018

author name string

Eran Eyal

series ordinal

1

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18 March 2018

Lee-Wei Yang

series ordinal

2

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18 March 2018

Ivet Bahar

series ordinal

3

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18 March 2018

language of work or name

English

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publication date

23 August 2006

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18 March 2018

published in

Bioinformatics

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18 March 2018

volume

22

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18 March 2018

page(s)

2619-2627

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18 March 2018

issue

21

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18 March 2018

Normal modes for predicting protein motions: a comprehensive database assessment and associated Web tool

cites work

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL448

Direct evaluation of thermal fluctuations in proteins using a single-parameter harmonic potential.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL448

21 January 2018

The Protein Data Bank

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL448

MoViES: molecular vibrations evaluation server for analysis of fluctuational dynamics of proteins and nucleic acids

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL448

Elastic network models for understanding biomolecular machinery: from enzymes to supramolecular assemblies

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL448

Allosteric changes in protein structure computed by a simple mechanical model: hemoglobin T<-->R2 transition.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL448

Simplified normal mode analysis of conformational transitions in DNA-dependent polymerases: the elastic network model

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL448

The limit of accuracy of protein modeling: influence of crystal packing on protein structure.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL448

Gaussian Dynamics of Folded Proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL448

Analysis of domain motions by approximate normal mode calculations.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL448

Functional motions of influenza virus hemagglutinin: a structure-based analytical approach

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL448

Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL448

Normal mode analysis of macromolecular motions in a database framework: developing mode concentration as a useful classifying statistic

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL448

NOMAD-Ref: visualization, deformation and refinement of macromolecular structures based on all-atom normal mode analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL448

Quantification of protein surfaces, volumes and atom-atom contacts using a constrained Voronoi procedure.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL448

Accurate and efficient description of protein vibrational dynamics: comparing molecular dynamics and Gaussian models.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL448

SCOP: a structural classification of proteins database for the investigation of sequences and structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL448

PDB-REPRDB: a database of representative protein chains from the Protein Data Bank (PDB) in 2003.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL448

HIV-1 protease molecular dynamics of a wild-type and of the V82F/I84V mutant: possible contributions to drug resistance and a potential new target site for drugs

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL448

Identification of core amino acids stabilizing rhodopsin

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL448

Maturation dynamics of bacteriophage HK97 capsid.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL448

General atomic and molecular electronic structure system

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL448

ElNemo: a normal mode web server for protein movement analysis and the generation of templates for molecular replacement

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL448

Dynamic reorganization of the functionally active ribosome explored by normal mode analysis and cryo-electron microscopy

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL448

Large Amplitude Elastic Motions in Proteins from a Single-Parameter, Atomic Analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL448

Dynamical properties of the MscL of Escherichia coli: a normal mode analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL448

ProMode: a database of normal mode analyses on protein molecules with a full-atom model.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL448

Global ribosome motions revealed with elastic network model.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL448

Coupling between catalytic site and collective dynamics: a requirement for mechanochemical activity of enzymes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL448

iGNM: a database of protein functional motions based on Gaussian Network Model.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL448

oGNM: online computation of structural dynamics using the Gaussian Network Model

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL448

A comparative study of motor-protein motions by using a simple elastic-network model

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL448

10.1093/BIOINFORMATICS/BTL448

21 January 2018

Identifiers

DOI

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18 March 2018

journals/bioinformatics/EyalYB06

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

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18 March 2018