(Q51887987)

16 April 2018

title

Getting a tree fast: Neighbor Joining, FastME, and distance-based methods. (English)

1 reference

16 April 2018

author name string

Richard Desper

series ordinal

1

1 reference

16 April 2018

Olivier Gascuel

series ordinal

2

1 reference

16 April 2018

publication date

1 October 2006

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16 April 2018

Current Protocols in Bioinformatics

published in

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16 April 2018

volume

Chapter 6

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16 April 2018

page(s)

Unit 6.3

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16 April 2018

Weighted neighbor joining: a likelihood-based approach to distance-based phylogeny reconstruction

cites work

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0603S15

Fast and accurate phylogeny reconstruction algorithms based on the minimum-evolution principle

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0603S15

Theoretical foundation of the balanced minimum evolution method of phylogenetic inference and its relationship to weighted least-squares tree fitting

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0603S15

An alternating least squares approach to inferring phylogenies from pairwise distances.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0603S15

A Hidden Markov Model approach to variation among sites in rate of evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0603S15

Construction of phylogenetic trees

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0603S15

Maximum-likelihood phylogenetic analysis under a covarion-like model.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0603S15

BIONJ: an improved version of the NJ algorithm based on a simple model of sequence data

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0603S15

Efficient biased estimation of evolutionary distances when substitution rates vary across sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0603S15

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0603S15

QuickTree: building huge Neighbour-Joining trees of protein sequences.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0603S15

A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0603S15

Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in hominoidea

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0603S15

Direct calculation of a tree length using a distance matrix.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0603S15

WWW-query: an on-line retrieval system for biological sequence banks

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0603S15

RAxML-III: a fast program for maximum likelihood-based inference of large phylogenetic trees

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0603S15

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0603S15

A transition probability model for amino acid substitutions from blocks.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0603S15

Shortest triplet clustering: reconstructing large phylogenies using representative sets

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0603S15

DAMBE: software package for data analysis in molecular biology and evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI0603S15

10.1002/0471250953.BI0603S15

21 January 2018

Identifiers

DOI

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Fatcat ID

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Fatcat

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mapped directly with Wikidata item

30 July 2022

based on heuristic

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https://api.fatcat.wiki/v0/release/xk4vxdwc7zaevbpduqpzvcfbkq