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Translational selection and molecular evolution
scientific article published on 01 December 1998
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scholarly article
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Europe PubMed Central
PubMed ID
9914211
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9914211%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 December 2019
review article
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Europe PubMed Central
title
Translational selection and molecular evolution
(English)
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Europe PubMed Central
PubMed ID
9914211
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9914211%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 December 2019
author
Adam Eyre-Walker
series ordinal
2
1 reference
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Europe PubMed Central
PubMed ID
9914211
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9914211%20AND%20SRC:MED&resulttype=core&format=json
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9 December 2019
author name string
H Akashi
series ordinal
1
1 reference
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Europe PubMed Central
PubMed ID
9914211
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9914211%20AND%20SRC:MED&resulttype=core&format=json
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9 December 2019
publication date
1 December 1998
1 reference
stated in
Europe PubMed Central
PubMed ID
9914211
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9914211%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 December 2019
published in
Current Opinion in Genetics & Development
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stated in
Europe PubMed Central
PubMed ID
9914211
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9914211%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 December 2019
volume
8
1 reference
stated in
Europe PubMed Central
PubMed ID
9914211
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9914211%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 December 2019
page(s)
688-693
1 reference
stated in
Europe PubMed Central
PubMed ID
9914211
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9914211%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 December 2019
issue
6
1 reference
stated in
Europe PubMed Central
PubMed ID
9914211
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9914211%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 December 2019
cites work
Codon usage: mutational bias, translational selection, or both?
1 reference
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Crossref
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7 January 2021
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Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes: A proposal for a synonymous codon choice that is optimal for the E. coli translational system
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reference URL
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7 January 2021
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Correlation between the abundance of yeast transfer RNAs and the occurrence of the respective codons in protein genes. Differences in synonymous codon choice patterns of yeast and Escherichia coli with reference to the abundance of isoaccepting tran
1 reference
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Crossref
reference URL
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7 January 2021
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Preferential codon usage in prokaryotic genes: the optimal codon-anticodon interaction energy and the selective codon usage in efficiently expressed genes
1 reference
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Crossref
reference URL
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7 January 2021
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tRNA genes and retroelements in the yeast genome
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Crossref
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7 January 2021
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Levels of tRNAs in bacterial cells as affected by amino acid usage in proteins
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7 January 2021
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Selection pressures on codon usage in the complete genome of bacteriophage T7
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7 January 2021
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Codon usage bias and tRNA abundance in Drosophila
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Crossref
reference URL
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7 January 2021
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inferred from DOI database lookup
Synonymous codon bias is related to gene length in Escherichia coli: selection for translational accuracy?
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-437X%2898%2980038-5
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7 January 2021
based on heuristic
inferred from DOI database lookup
Codon usage in bacteria: correlation with gene expressivity
1 reference
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Crossref
reference URL
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7 January 2021
based on heuristic
inferred from DOI database lookup
Synonymous codon usage in Saccharomyces cerevisiae
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-437X%2898%2980038-5
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7 January 2021
based on heuristic
inferred from DOI database lookup
Synonymous codon usage in Bacillus subtilis reflects both translational selection and mutational biases
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-437X%2898%2980038-5
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7 January 2021
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inferred from DOI database lookup
Codon usage in the Mycobacterium tuberculosis complex
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Crossref
reference URL
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7 January 2021
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Divergence in codon usage of Lactobacillus species
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Crossref
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7 January 2021
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Codon preference in corynebacteria.
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7 January 2021
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Codon usage in Aspergillus nidulans
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-437X%2898%2980038-5
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7 January 2021
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Synonymous codon usage in Kluyveromyces lactis.
1 reference
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Crossref
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7 January 2021
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Evolution of codon usage patterns: the extent and nature of divergence between Candida albicans and Saccharomyces cerevisiae
1 reference
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Crossref
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7 January 2021
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inferred from DOI database lookup
Codon usage and gene function are related in sequences of Arabidopsis thaliana
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-437X%2898%2980038-5
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7 January 2021
based on heuristic
inferred from DOI database lookup
Codon usage and gene expression level in Dictyostelium discoideum: highly expressed genes do 'prefer' optimal codons
1 reference
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Crossref
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7 January 2021
based on heuristic
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Codon usage in Caenorhabditis elegans: delineation of translational selection and mutational biases
1 reference
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Crossref
reference URL
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7 January 2021
based on heuristic
inferred from DOI database lookup
Selection on the codon bias of chloroplast and cyanelle genes in different plant and algal lineages.
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-437X%2898%2980038-5
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7 January 2021
based on heuristic
inferred from DOI database lookup
Models of nearly neutral mutations with particular implications for nonrandom usage of synonymous codons.
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-437X%2898%2980038-5
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7 January 2021
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THE RELATION OF RECOMBINATION TO MUTATIONAL ADVANCE
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-437X%2898%2980038-5
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7 January 2021
based on heuristic
inferred from DOI database lookup
The effect of background selection against deleterious mutations on weakly selected, linked variants
1 reference
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Crossref
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7 January 2021
based on heuristic
inferred from DOI database lookup
Codon bias evolution in Drosophila. Population genetics of mutation-selection drift
1 reference
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Crossref
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7 January 2021
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Synonymous substitution-rate constants in Escherichia coli and Salmonella typhimurium and their relationship to gene expression and selection pressure.
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Crossref
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7 January 2021
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The gut esterase gene (ges-1) from the nematodes Caenorhabditis elegans and Caenorhabditis briggsae.
1 reference
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Crossref
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7 January 2021
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Translational accuracy and the fitness of bacteria
1 reference
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Crossref
reference URL
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7 January 2021
based on heuristic
inferred from DOI database lookup
Rates of aminoacyl-tRNA selection at 29 sense codons in vivo.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-437X%2898%2980038-5
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Co-variation of tRNA abundance and codon usage in Escherichia coli at different growth rates.
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-437X%2898%2980038-5
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Growth rate-optimised tRNA abundance and codon usage.
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-437X%2898%2980038-5
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7 January 2021
based on heuristic
inferred from DOI database lookup
Codon bias in Escherichia coli: the influence of codon context on mutation and selection.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-437X%2898%2980038-5
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7 January 2021
based on heuristic
inferred from DOI database lookup
Absolute in vivo translation rates of individual codons in Escherichia coli. The two glutamic acid codons GAA and GAG are translated with a threefold difference in rate.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-437X%2898%2980038-5
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The mosaic genome of warm-blooded vertebrates
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-437X%2898%2980038-5
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Synonymous and nonsynonymous substitutions in mammalian genes: intragenic correlations
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-437X%2898%2980038-5
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Gene length and codon usage bias in Drosophila melanogaster, Saccharomyces cerevisiae and Escherichia coli
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-437X%2898%2980038-5
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Programmed translational frameshifting.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-437X%2898%2980038-5
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Analyses of frameshifting at UUU-pyrimidine sites
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-437X%2898%2980038-5
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7 January 2021
based on heuristic
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The efficiency of folding of some proteins is increased by controlled rates of translation in vivo. A hypothesis
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-437X%2898%2980038-5
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Codon usage and intragenic position
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-437X%2898%2980038-5
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Suppression of the negative effect of minor arginine codons on gene expression; preferential usage of minor codons within the first 25 codons of the Escherichia coli genes
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-437X%2898%2980038-5
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7 January 2021
based on heuristic
inferred from DOI database lookup
The close proximity of Escherichia coli genes: consequences for stop codon and synonymous codon use.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-437X%2898%2980038-5
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7 January 2021
based on heuristic
inferred from DOI database lookup
Patterns of Base Composition Within the Genes of Drosophila melanogaster
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-437X%2898%2980038-5
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7 January 2021
based on heuristic
inferred from DOI database lookup
Selection costs of amino acid substitutions in ColE1 and ColIa gene clusters harbored by Escherichia coli
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-437X%2898%2980038-5
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7 January 2021
based on heuristic
inferred from DOI database lookup
Hydrophobicity, expressivity and aromaticity are the major trends of amino-acid usage in 999 Escherichia coli chromosome-encoded genes
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-437X%2898%2980038-5
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7 January 2021
based on heuristic
inferred from DOI database lookup
Genomic evolution drives the evolution of the translation system
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-437X%2898%2980038-5
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7 January 2021
based on heuristic
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The codon Adaptation Index--a measure of directional synonymous codon usage bias, and its potential applications
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-437X%2898%2980038-5
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7 January 2021
based on heuristic
inferred from DOI database lookup
The 'effective number of codons' used in a gene
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-437X%2898%2980038-5
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7 January 2021
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inferred from DOI database lookup
Identifiers
DOI
10.1016/S0959-437X(98)80038-5
1 reference
stated in
Europe PubMed Central
PubMed ID
9914211
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9914211%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 December 2019
PubMed ID
9914211
1 reference
stated in
Europe PubMed Central
PubMed ID
9914211
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9914211%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 December 2019
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