(Q57569060)

15

1 reference

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30 December 2020

author name string

Michael R Garvin

1

1 reference

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30 December 2020

Erica T Prates

2

1 reference

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30 December 2020

Mirko Pavicic

3

1 reference

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30 December 2020

Piet Jones

4

1 reference

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30 December 2020

B Kirtley Amos

5

1 reference

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30 December 2020

Armin Geiger

6

1 reference

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30 December 2020

Manesh B Shah

7

1 reference

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30 December 2020

Jared Streich

8

1 reference

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30 December 2020

Joao Gabriel Felipe Machado Gazolla

9

1 reference

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30 December 2020

David Kainer

10

1 reference

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30 December 2020

Ashley Cliff

11

1 reference

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30 December 2020

Jonathon Romero

12

1 reference

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30 December 2020

Nathan Keith

13

1 reference

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30 December 2020

James B Brown

14

1 reference

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30 December 2020

language of work or name

English

1 reference

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30 December 2020

publication date

23 December 2020

1 reference

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30 December 2020

1 reference

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30 December 2020

volume

21

1 reference

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30 December 2020

page(s)

304

1 reference

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30 December 2020

issue

1

1 reference

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describes a project that uses

30 December 2020

Cytoscape

object named as

Cytoscape

2 references

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

Glycosylation of bacterial cellulases prevents proteolytic cleavage between functional domains.

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[Isoelectric spectrum and peptide maps of albumin in chicken liver after hybridization]

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Epidemiology of hypothyroidism due to congenital malformation of the gland: athyreosis or ectopic thyroid (author's transl)

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Crystal structures of complexes of PcrA DNA helicase with a DNA substrate indicate an inchworm mechanism

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Median-joining networks for inferring intraspecific phylogenies

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Virus-encoded proteinases and proteolytic processing in the Nidovirales.

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12 December 2020

A third member of the RNA-specific adenosine deaminase gene family, ADAR3, contains both single- and double-stranded RNA binding domains

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12 December 2020

Native protein sequences are close to optimal for their structures

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12 December 2020

Coronavirus main proteinase (3CLpro) structure: basis for design of anti-SARS drugs

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12 December 2020

Cytoscape: a software environment for integrated models of biomolecular interaction networks

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12 December 2020

The nsp9 replicase protein of SARS-coronavirus, structure and functional insights

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12 December 2020

Analysis of multimerization of the SARS coronavirus nucleocapsid protein

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12 December 2020

Human coronavirus 229E nonstructural protein 13: characterization of duplex-unwinding, nucleoside triphosphatase, and RNA 5'-triphosphatase activities

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12 December 2020

Identification and characterization of severe acute respiratory syndrome coronavirus replicase proteins

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Highly infectious SARS-CoV pseudotyped virus reveals the cell tropism and its correlation with receptor expression

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12 December 2020

Retroviruses pseudotyped with the severe acute respiratory syndrome coronavirus spike protein efficiently infect cells expressing angiotensin-converting enzyme 2.

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12 December 2020

The severe acute respiratory syndrome coronavirus nucleocapsid protein is phosphorylated and localizes in the cytoplasm by 14-3-3-mediated translocation

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12 December 2020

Insights into SARS-CoV transcription and replication from the structure of the nsp7-nsp8 hexadecamer

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12 December 2020

Structural basis of severe acute respiratory syndrome coronavirus ADP-ribose-1''-phosphate dephosphorylation by a conserved domain of nsP3.

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Dodecamer structure of severe acute respiratory syndrome coronavirus nonstructural protein nsp10.

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Severe acute respiratory syndrome-associated coronavirus 3a protein forms an ion channel and modulates virus release

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12 December 2020

Structure, expression, and intracellular localization of the SARS-CoV accessory proteins 7a and 7b.

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12 December 2020

The influence of recombination on human genetic diversity

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12 December 2020

The ORF7b protein of severe acute respiratory syndrome coronavirus (SARS-CoV) is expressed in virus-infected cells and incorporated into SARS-CoV particles

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12 December 2020

Augmentation of chemokine production by severe acute respiratory syndrome coronavirus 3a/X1 and 7a/X4 proteins through NF-kappaB activation

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12 December 2020

Canonical sampling through velocity rescaling

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12 December 2020

Severe acute respiratory syndrome coronavirus accessory protein 6 is a virion-associated protein and is released from 6 protein-expressing cells

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12 December 2020

G1 phase cell cycle arrest induced by SARS-CoV 3a protein via the cyclin D3/pRb pathway

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12 December 2020

Antigenic characterization of severe acute respiratory syndrome-coronavirus nucleocapsid protein expressed in insect cells: The effect of phosphorylation on immunoreactivity and specificity.

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12 December 2020

Analysis of intraviral protein-protein interactions of the SARS coronavirus ORFeome

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12 December 2020

The membrane protein of SARS-CoV suppresses NF-kappaB activation

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12 December 2020

Biochemical characterization of exoribonuclease encoded by SARS coronavirus

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12 December 2020

High-resolution design of a protein loop

1 reference

12 December 2020

Proteomics analysis unravels the functional repertoire of coronavirus nonstructural protein 3.

1 reference

12 December 2020

Phosphorylation of the arginine/serine dipeptide-rich motif of the severe acute respiratory syndrome coronavirus nucleocapsid protein modulates its multimerization, translation inhibitory activity and cellular localization

1 reference

12 December 2020

Severe acute respiratory syndrome coronavirus 3a protein activates the mitochondrial death pathway through p38 MAP kinase activation.

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12 December 2020

Variable oligomerization modes in coronavirus non-structural protein 9

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12 December 2020

Multiple nucleic acid binding sites and intrinsic disorder of severe acute respiratory syndrome coronavirus nucleocapsid protein: implications for ribonucleocapsid protein packaging.

1 reference

12 December 2020

The population genetics of dN/dS

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12 December 2020

Severe acute respiratory syndrome coronavirus protein 6 is required for optimal replication

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12 December 2020

The SR-rich motif in SARS-CoV nucleocapsid protein is important for virus replication.

1 reference

12 December 2020

Severe acute respiratory syndrome coronavirus M protein inhibits type I interferon production by impeding the formation of TRAF3.TANK.TBK1/IKKepsilon complex.

1 reference

12 December 2020

Coronaviruses post-SARS: update on replication and pathogenesis

1 reference

12 December 2020

Nuclear Magnetic Resonance Structure of the Nucleic Acid-Binding Domain of Severe Acute Respiratory Syndrome Coronavirus Nonstructural Protein 3

1 reference

12 December 2020

A two-pronged strategy to suppress host protein synthesis by SARS coronavirus Nsp1 protein

1 reference

12 December 2020

The SARS Coronavirus 3a protein causes endoplasmic reticulum stress and induces ligand-independent downregulation of the type 1 interferon receptor

1 reference

12 December 2020

In vitro reconstitution of SARS-coronavirus mRNA cap methylation

1 reference

12 December 2020

The coronavirus nucleocapsid protein is dynamically associated with the replication-transcription complexes

1 reference

12 December 2020

A structural analysis of M protein in coronavirus assembly and morphology

1 reference

12 December 2020

Crystal Structure and Functional Analysis of the SARS-Coronavirus RNA Cap 2′-O-Methyltransferase nsp10/nsp16 Complex

1 reference

12 December 2020

RosettaRemodel: a generalized framework for flexible backbone protein design.

1 reference

12 December 2020

Prohibitin 1 modulates mitochondrial stress-related autophagy in human colonic epithelial cells

1 reference

12 December 2020

Vitamin D deficiency decreases the expression of VDR and prohibitin in the lungs of mice with allergic airway inflammation

1 reference

12 December 2020

A vitellogenin polyserine cleavage site: highly disordered conformation protected from proteolysis by phosphorylation

1 reference

12 December 2020

Mechanism of nucleic acid unwinding by SARS-CoV helicase.

1 reference

12 December 2020

Intrinsic disorder-based protein interactions and their modulators

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12 December 2020

Characterization of a critical interaction between the coronavirus nucleocapsid protein and nonstructural protein 3 of the viral replicase-transcriptase complex

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12 December 2020

CHARMM36 all-atom additive protein force field: validation based on comparison to NMR data

1 reference

12 December 2020

Severe acute respiratory syndrome coronavirus nonstructural proteins 3, 4, and 6 induce double-membrane vesicles

1 reference

12 December 2020

The case for the continuing use of the revised Cambridge Reference Sequence (rCRS) and the standardization of notation in human mitochondrial DNA studies

1 reference

12 December 2020

Coronaviruses as DNA wannabes: a new model for the regulation of RNA virus replication fidelity

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12 December 2020

The SARS coronavirus nucleocapsid protein--forms and functions.

1 reference

12 December 2020

Structure of a conserved Golgi complex-targeting signal in coronavirus envelope proteins

1 reference

12 December 2020

Membrane rearrangements mediated by coronavirus nonstructural proteins 3 and 4.

1 reference

12 December 2020

Adaptation to fluctuating temperatures in an RNA virus is driven by the most stringent selective pressure

1 reference

12 December 2020

SARS-coronavirus open reading frame-9b suppresses innate immunity by targeting mitochondria and the MAVS/TRAF3/TRAF6 signalosome

1 reference

12 December 2020

One severe acute respiratory syndrome coronavirus protein complex integrates processive RNA polymerase and exonuclease activities

1 reference

12 December 2020

p53 degradation by a coronavirus papain-like protease suppresses type I interferon signaling

1 reference

12 December 2020

Coronavirus nsp10/nsp16 Methyltransferase Can Be Targeted by nsp10-Derived Peptide In Vitro and In Vivo To Reduce Replication and Pathogenesis

1 reference

12 December 2020

Evolution: are the monkeys' typewriters rigged?

1 reference

12 December 2020

Structural basis and functional analysis of the SARS coronavirus nsp14-nsp10 complex

1 reference

12 December 2020

Severe Acute Respiratory Syndrome Coronavirus ORF7a Inhibits Bone Marrow Stromal Antigen 2 Virion Tethering through a Novel Mechanism of Glycosylation Interference

1 reference

12 December 2020

GISAID: Global initiative on sharing all influenza data - from vision to reality

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12 December 2020

Behaviour of intrinsically disordered proteins in protein-protein complexes with an emphasis on fuzziness

1 reference

12 December 2020

Nsp3 of coronaviruses: Structures and functions of a large multi-domain protein.

1 reference

12 December 2020

The impact of O-glycan chemistry on the stability of intrinsically disordered proteins.

1 reference

12 December 2020

Why are RNA virus mutation rates so damn high?

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12 December 2020

Attenuation of replication by a 29 nucleotide deletion in SARS-coronavirus acquired during the early stages of human-to-human transmission

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12 December 2020

Mitochondrial Quality Control Mechanisms and the PHB (Prohibitin) Complex

1 reference

12 December 2020

Delicate structural coordination of the Severe Acute Respiratory Syndrome coronavirus Nsp13 upon ATP hydrolysis

1 reference

12 December 2020

Structure of the SARS-CoV nsp12 polymerase bound to nsp7 and nsp8 co-factors

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12 December 2020

Wavelet-Based Genomic Signal Processing for Centromere Identification and Hypothesis Generation.

1 reference

12 December 2020

A High-Performance Computing Implementation of Iterative Random Forest for the Creation of Predictive Expression Networks

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12 December 2020

Improved protein structure prediction using predicted interresidue orientations

1 reference

12 December 2020

Genomic characterization of the 2019 novel human-pathogenic coronavirus isolated from a patient with atypical pneumonia after visiting Wuhan

1 reference

12 December 2020

Genome Composition and Divergence of the Novel Coronavirus (2019-nCoV) Originating in China

1 reference

12 December 2020

Cryo-EM structure of the 2019-nCoV spike in the prefusion conformation

1 reference

12 December 2020

Structural basis for the recognition of the SARS-CoV-2 by full-length human ACE2

1 reference

12 December 2020

SARS-CoV-2 Cell Entry Depends on ACE2 and TMPRSS2 and Is Blocked by a Clinically Proven Protease Inhibitor

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12 December 2020

Structure, Function, and Antigenicity of the SARS-CoV-2 Spike Glycoprotein

1 reference

12 December 2020

The establishment of reference sequence for SARS-CoV-2 and variation analysis

1 reference

12 December 2020

Structure of the RNA-dependent RNA polymerase from COVID-19 virus

1 reference

12 December 2020

Genomic characterization of a novel SARS-CoV-2

1 reference

12 December 2020

Crystal structure of Nsp15 endoribonuclease NendoU from SARS-CoV-2

1 reference

12 December 2020

Emerging SARS-CoV-2 mutation hot spots include a novel RNA-dependent-RNA polymerase variant

1 reference

12 December 2020

The Architecture of SARS-CoV-2 Transcriptome

1 reference

12 December 2020

A SARS-CoV-2 protein interaction map reveals targets for drug repurposing

1 reference

12 December 2020

Structure of replicating SARS-CoV-2 polymerase

1 reference

12 December 2020

Mutation Patterns of Human SARS-CoV-2 and Bat RaTG13 Coronavirus Genomes Are Strongly Biased Towards C>U Transitions, Indicating Rapid Evolution in Their Hosts

1 reference

12 December 2020

Evidence for strong mutation bias towards, and selection against, U content in SARS-CoV-2: implications for vaccine design

1 reference

12 December 2020

Distinct conformational states of SARS-CoV-2 spike protein

1 reference

12 December 2020

Tracking changes in SARS-CoV-2 Spike: evidence that D614G increases infectivity of the COVID-19 virus

1 reference

12 December 2020

Cryptic transmission of SARS-CoV-2 in Washington state

1 reference

12 December 2020

Potential pathogenicity determinants identified from structural proteomics of SARS-CoV and SARS-CoV-2

1 reference

12 December 2020

Structural and Functional Analysis of the D614G SARS-CoV-2 Spike Protein Variant

1 reference

12 December 2020

Identifiers

DOI

10.1063/1.448118

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:33357233%20AND%20SRC:MED&resulttype=core&format=json

30 December 2020

0 references

1 reference