(Q77435885)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11771964%20AND%20SRC:MED&resulttype=core&format=json

5 December 2019

title

Relation between sequence and structure of HIV-1 protease inhibitor complexes: a model system for the analysis of protein flexibility (English)

1 reference

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5 December 2019

3

Karplus M

1 reference

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5 December 2019

author name string

Zoete V

series ordinal

1

1 reference

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5 December 2019

Michielin O

series ordinal

2

1 reference

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5 December 2019

publication date

1 January 2002

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11771964%20AND%20SRC:MED&resulttype=core&format=json

Journal of Molecular Biology

5 December 2019

number of pages

32

1 reference

based on heuristic

inferred from page(s)

published in

1 reference

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5 December 2019

volume

315

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11771964%20AND%20SRC:MED&resulttype=core&format=json

5 December 2019

page(s)

21-52

1 reference

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5 December 2019

issue

1

1 reference

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Rational design, synthesis, and crystallographic analysis of a hydroxyethylene-based HIV-1 protease inhibitor containing a heterocyclic P1'--P2' amide bond isostere

5 December 2019

cites work

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Active human immunodeficiency virus protease is required for viral infectivity

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Human immunodeficiency virus. Mutations in the viral protease that confer resistance to saquinavir increase the dissociation rate constant of the protease-saquinavir complex

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Comparative analysis of the X-ray structures of HIV-1 and HIV-2 proteases in complex with CGP 53820, a novel pseudosymmetric inhibitor

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Analysis of the structure of HIV-1 protease complexed with a hexapeptide inhibitor. Part II: Molecular dynamic studies of the active site region.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

All-atom empirical potential for molecular modeling and dynamics studies of proteins

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Crystal structure of an in vivo HIV-1 protease mutant in complex with saquinavir: Insights into the mechanisms of drug resistance

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Ligand-induced conformational changes in ras p21: a normal mode and energy minimization analysis.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

LIGPLOT: a program to generate schematic diagrams of protein-ligand interactions

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Database of HIV proteinase structures

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Crystal structures of complexes of a peptidic inhibitor with wild-type and two mutant HIV-1 proteases

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Inhibitors of HIV-1 protease: a major success of structure-assisted drug design

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Dynamics of ligand binding to myoglobin

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Conserved folding in retroviral proteases: crystal structure of a synthetic HIV-1 protease

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

MOLMOL: a program for display and analysis of macromolecular structures

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Solution NMR evidence that the HIV-1 protease catalytic aspartyl groups have different ionization states in the complex formed with the asymmetric drug KNI-272.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Dynamics of folded proteins

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

X-ray crystallographic studies of a series of penicillin-derived asymmetric inhibitors of HIV-1 protease

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Inhibition of human immunodeficiency virus-1 protease by a C2-symmetric phosphinate. Synthesis and crystallographic analysis

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

The contribution of vibrational entropy to molecular association. The dimerization of insulin.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

General atomic and molecular electronic structure system

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Multiple copy simultaneous search and construction of ligands in binding sites: application to inhibitors of HIV-1 aspartic proteinase

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Comment on a "fluctuation and cross correlation analysis of protein motions observed in nanosecond molecular dynamics simulations"

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Molecular dynamics of HIV-1 protease

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Structure-based thermodynamic analysis of HIV-1 protease inhibitors

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Multiple conformational states of proteins: a molecular dynamics analysis of myoglobin

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Hydrophilic peptides derived from the transframe region of Gag-Pol inhibit the HIV-1 protease

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Molecular dynamics simulations in biology

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Complete mutagenesis of the HIV-1 protease

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Domain flexibility in retroviral proteases: structural implications for drug resistant mutations

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Structure-based design of novel HIV protease inhibitors: carboxamide-containing 4-hydroxycoumarins and 4-hydroxy-2-pyrones as potent nonpeptidic inhibitors

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Comparison of conformational characteristics in structurally similar protein pairs

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Study of protein dynamics by X-ray diffraction

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Structural Determinants of Protein Dynamics: Analysis of 15N NMR Relaxation Measurements for Main-Chain and Side-Chain Nuclei of Hen Egg White Lysozyme

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Selection of multiple human immunodeficiency virus type 1 variants that encode viral proteases with decreased sensitivity to an inhibitor of the viral protease

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Cyclic HIV-1 protease inhibitors derived from mannitol: synthesis, inhibitory potencies, and computational predictions of binding affinities.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Rapid X-ray diffraction analysis of HIV-1 protease-inhibitor complexes: inhibitor exchange in single crystals of the bound enzyme

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Temperature-dependent X-ray diffraction as a probe of protein structural dynamics

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Structure of HIV-1 protease with KNI-272: a transition state mimetic inhibitor containing allophenylnorstatine

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

CHARMM: A program for macromolecular energy, minimization, and dynamics calculations

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Main-chain dynamics of a partially folded protein: 15N NMR relaxation measurements of hen egg white lysozyme denatured in trifluoroethanol

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Domain communication in the dynamical structure of human immunodeficiency virus 1 protease

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Viracept (nelfinavir mesylate, AG1343): a potent, orally bioavailable inhibitor of HIV-1 protease

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Database of three-dimensional structures of HIV proteinases

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Structure of HIV-1 protease with KNI-272, a tight-binding transition-state analog containing allophenylnorstatine

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Three-dimensional structure of aspartyl protease from human immunodeficiency virus HIV-1

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Phenotypic and genotypic analysis of clinical HIV-1 isolates reveals extensive protease inhibitor cross-resistance: a survey of over 6000 samples.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Crystallographic studies of the dynamic properties of lysozyme

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

How does a symmetric dimer recognize an asymmetric substrate? A substrate complex of HIV-1 protease

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Internal mobility of ferrocytochrome c.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

A check on rational drug design: crystal structure of a complex of human immunodeficiency virus type 1 protease with a novel gamma-turn mimetic inhibitor

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

In vitro selection and characterization of VX-478 resistant HIV-1 variants.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Potential derived charges using a geodesic point selection scheme

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Inhibition and catalytic mechanism of HIV-1 aspartic protease

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

In vitro selection and characterization of human immunodeficiency virus type 1 (HIV-1) isolates with reduced sensitivity to hydroxyethylamino sulfonamide inhibitors of HIV-1 aspartyl protease

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Structural biology of HIV.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

How different amino acid sequences determine similar protein structures: the structure and evolutionary dynamics of the globins

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2001.5173

Identifiers

DOI

10.1006/JMBI.2001.5173

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11771964%20AND%20SRC:MED&resulttype=core&format=json

5 December 2019

1 reference