(Q78339347)

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Rationalization of gene regulation by a eukaryotic transcription factor: calculation of regulatory region occupancy from predicted binding affinities

scientific article published on 01 October 2002

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scholarly article

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13 December 2019

Rationalization of gene regulation by a eukaryotic transcription factor: calculation of regulatory region occupancy from predicted binding affinities (English)

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13 December 2019

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13 December 2019

author name string

Neil D Clarke

2

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13 December 2019

publication date

1 October 2002

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13 December 2019

Journal of Molecular Biology

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13 December 2019

323

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13 December 2019

1-8

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13 December 2019

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13 December 2019

Structure of yeast regulatory gene LEU3 and evidence that LEU3 itself is under general amino acid control

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7 January 2021

The Saccharomyces cerevisiae Leu3 protein activates expression of GDH1, a key gene in nitrogen assimilation

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Transcriptional regulation of the Saccharomyces cerevisiae amino acid permease gene BAP2.

1 reference

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LEU3 of Saccharomyces cerevisiae activates multiple genes for branched-chain amino acid biosynthesis by binding to a common decanucleotide core sequence

1 reference

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7 January 2021

DNA binding sites: representation and discovery

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Identification of regulatory regions which confer muscle-specific gene expression.

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Genome-wide analysis of clustered Dorsal binding sites identifies putative target genes in the Drosophila embryo

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Exploiting transcription factor binding site clustering to identify cis-regulatory modules involved in pattern formation in the Drosophila genome

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7 January 2021

Transcriptional regulator Leu3 of Saccharomyces cerevisiae: separation of activator and repressor functions

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7 January 2021

Measurement of protein-DNA interaction parameters by electrophoresis mobility shift assay

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7 January 2021

Defining the sequence specificity of DNA-binding proteins by selecting binding sites from random-sequence oligonucleotides: analysis of yeast GCN4 protein

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7 January 2021

Specificity of the Mnt protein determined by binding to randomized operators

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7 January 2021

Lambda repressor recognizes the approximately 2-fold symmetric half-operator sequences asymmetrically

1 reference

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7 January 2021

Analysis of the sequence-specific interactions between Cro repressor and operator DNA by systematic base substitution experiments

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7 January 2021

Length-encoded multiplex binding site determination: application to zinc finger proteins

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7 January 2021

Quantitative analysis of the relationship between nucleotide sequence and functional activity

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7 January 2021

The meaning and use of the area under a receiver operating characteristic (ROC) curve

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7 January 2021

Nucleotides of transcription factor binding sites exert interdependent effects on the binding affinities of transcription factors

1 reference

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7 January 2021

Quantitative specificity of the Mnt repressor

1 reference

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7 January 2021

Non-independence of Mnt repressor-operator interaction determined by a new quantitative multiple fluorescence relative affinity (QuMFRA) assay.

1 reference

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7 January 2021

Identifiers

10.1016/S0022-2836(02)00894-X

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13 December 2019

1 reference

Europe PubMed Central

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13 December 2019

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