(Q90695399)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32218446%20AND%20SRC:MED&resulttype=core&format=json

15 April 2020

title

Generation of a murine SWATH-MS spectral library to quantify more than 11,000 proteins (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32218446%20AND%20SRC:MED&resulttype=core&format=json

15 April 2020

author name string

Chuan-Qi Zhong

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32218446%20AND%20SRC:MED&resulttype=core&format=json

15 April 2020

Jianfeng Wu

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32218446%20AND%20SRC:MED&resulttype=core&format=json

15 April 2020

Xingfeng Qiu

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32218446%20AND%20SRC:MED&resulttype=core&format=json

15 April 2020

Xi Chen

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32218446%20AND%20SRC:MED&resulttype=core&format=json

15 April 2020

Changchuan Xie

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32218446%20AND%20SRC:MED&resulttype=core&format=json

15 April 2020

Jiahuai Han

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32218446%20AND%20SRC:MED&resulttype=core&format=json

15 April 2020

publication date

26 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32218446%20AND%20SRC:MED&resulttype=core&format=json

15 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32218446%20AND%20SRC:MED&resulttype=core&format=json

15 April 2020

volume

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32218446%20AND%20SRC:MED&resulttype=core&format=json

15 April 2020

issue

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32218446%20AND%20SRC:MED&resulttype=core&format=json

15 April 2020

page(s)

104

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32218446%20AND%20SRC:MED&resulttype=core&format=json

Targeted data extraction of the MS/MS spectra generated by data-independent acquisition: a new concept for consistent and accurate proteome analysis

15 April 2020

cites work

1 reference

https://api.crossref.org/works/10.1038%2FS41597-020-0449-Z

7 January 2021

Data-independent acquisition-based SWATH-MS for quantitative proteomics: a tutorial

1 reference

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7 January 2021

Multi-laboratory assessment of reproducibility, qualitative and quantitative performance of SWATH-mass spectrometry

1 reference

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7 January 2021

Quantification of Dynamic Protein Interactions and Phosphorylation in LPS Signaling Pathway by SWATH-MS

1 reference

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7 January 2021

A Targeted Mass Spectrometry Strategy for Developing Proteomic Biomarkers: A Case Study of Epithelial Ovarian Cancer

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7 January 2021

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7 January 2021

DIA-Umpire: comprehensive computational framework for data-independent acquisition proteomics

1 reference

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7 January 2021

Group-DIA: analyzing multiple data-independent acquisition mass spectrometry data files

1 reference

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7 January 2021

PECAN: library-free peptide detection for data-independent acquisition tandem mass spectrometry data.

1 reference

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7 January 2021

MSPLIT-DIA: sensitive peptide identification for data-independent acquisition

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7 January 2021

A multicenter study benchmarks software tools for label-free proteome quantification

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7 January 2021

Systematic Assessment of the Effect of Internal Library in Targeted Analysis of SWATH-MS

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7 January 2021

A repository of assays to quantify 10,000 human proteins by SWATH-MS.

1 reference

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7 January 2021

Spectral Libraries for SWATH-MS Assays for Drosophila melanogaster and Solanum lycopersicum

1 reference

https://api.crossref.org/works/10.1038%2FS41597-020-0449-Z

7 January 2021

Generation of a zebrafish SWATH-MS spectral library to quantify 10,000 proteins

1 reference

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7 January 2021

Cancer cell lines for drug discovery and development

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7 January 2021

Large-scale inference of protein tissue origin in gram-positive sepsis plasma using quantitative targeted proteomics

1 reference

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7 January 2021

Protocol for micro-purification, enrichment, pre-fractionation and storage of peptides for proteomics using StageTips

1 reference

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7 January 2021

Universal sample preparation method for proteome analysis

1 reference

https://api.crossref.org/works/10.1038%2FS41597-020-0449-Z

7 January 2021

Building high-quality assay libraries for targeted analysis of SWATH MS data

1 reference

https://api.crossref.org/works/10.1038%2FS41597-020-0449-Z

7 January 2021

A cross-platform toolkit for mass spectrometry and proteomics

1 reference

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7 January 2021

A method for reducing the time required to match protein sequences with tandem mass spectra

1 reference

https://api.crossref.org/works/10.1038%2FS41597-020-0449-Z

7 January 2021

General framework for developing and evaluating database scoring algorithms using the TANDEM search engine

1 reference

https://api.crossref.org/works/10.1038%2FS41597-020-0449-Z

7 January 2021

Comet: an open-source MS/MS sequence database search tool

1 reference

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7 January 2021

A uniform proteomics MS/MS analysis platform utilizing open XML file formats

1 reference

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7 January 2021

A statistical model-building perspective to identification of MS/MS spectra with PeptideProphet

1 reference

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7 January 2021

iProphet: multi-level integrative analysis of shotgun proteomic data improves peptide and protein identification rates and error estimates

1 reference

https://api.crossref.org/works/10.1038%2FS41597-020-0449-Z

7 January 2021

Protein identification false discovery rates for very large proteomics data sets generated by tandem mass spectrometry

1 reference

https://api.crossref.org/works/10.1038%2FS41597-020-0449-Z

7 January 2021

Building consensus spectral libraries for peptide identification in proteomics

1 reference

https://api.crossref.org/works/10.1038%2FS41597-020-0449-Z

7 January 2021

Identification of a Set of Conserved Eukaryotic Internal Retention Time Standards for Data-independent Acquisition Mass Spectrometry

1 reference

https://api.crossref.org/works/10.1038%2FS41597-020-0449-Z

7 January 2021

Using iRT, a normalized retention time for more targeted measurement of peptides

1 reference

https://api.crossref.org/works/10.1038%2FS41597-020-0449-Z

7 January 2021

OpenMS: a flexible open-source software platform for mass spectrometry data analysis

1 reference

https://api.crossref.org/works/10.1038%2FS41597-020-0449-Z

7 January 2021

mProphet: automated data processing and statistical validation for large-scale SRM experiments

1 reference

https://api.crossref.org/works/10.1038%2FS41597-020-0449-Z

7 January 2021

Statistical control of peptide and protein error rates in large-scale targeted data-independent acquisition analyses

1 reference

https://api.crossref.org/works/10.1038%2FS41597-020-0449-Z

7 January 2021

TRIC: an automated alignment strategy for reproducible protein quantification in targeted proteomics

1 reference

https://api.crossref.org/works/10.1038%2FS41597-020-0449-Z

7 January 2021

Inference and Validation of Protein Identifications

1 reference

https://api.crossref.org/works/10.1038%2FS41597-020-0449-Z

7 January 2021

The Generation of a Comprehensive Spectral Library for the Analysis of the Guinea Pig Proteome by SWATH-MS

1 reference

https://api.crossref.org/works/10.1038%2FS41597-020-0449-Z

7 January 2021

The pathobiology of myelin mutants reveal novel biological functions of the MBP and PLP genes.

1 reference

https://api.crossref.org/works/10.1038%2FS41597-020-0449-Z

7 January 2021

Extending the limits of quantitative proteome profiling with data-independent acquisition and application to acetaminophen-treated three-dimensional liver microtissues.

1 reference

https://api.crossref.org/works/10.1038%2FS41597-020-0449-Z

7 January 2021

Combining Rapid Data Independent Acquisition and CRISPR Gene Deletion for Studying Potential Protein Functions: A Case of HMGN1

1 reference

https://api.crossref.org/works/10.1038%2FS41597-020-0449-Z

7 January 2021

Advancing Urinary Protein Biomarker Discovery by Data-Independent Acquisition on a Quadrupole-Orbitrap Mass Spectrometer

1 reference

https://api.crossref.org/works/10.1038%2FS41597-020-0449-Z

7 January 2021

Surpassing 10 000 identified and quantified proteins in a single run by optimizing current LC-MS instrumentation and data analysis strategy

1 reference

https://api.crossref.org/works/10.1038%2FS41597-020-0449-Z

7 January 2021

OpenSWATH enables automated, targeted analysis of data-independent acquisition MS data

1 reference

https://api.crossref.org/works/10.1038%2FS41597-020-0449-Z

7 January 2021

Automated SWATH Data Analysis Using Targeted Extraction of Ion Chromatograms

1 reference

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7 January 2021

Epidemiology of chronic virus infections

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/32218446

12 December 2020

inferred from PubMed ID database lookup

The carbohydrate metabolism of normal subjects during potassium depletion

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/32218446

12 December 2020

inferred from PubMed ID database lookup

Ecogenetic studies in Atacameño Indians

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/32218446

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1038/S41597-020-0449-Z

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32218446%20AND%20SRC:MED&resulttype=core&format=json

15 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32218446%20AND%20SRC:MED&resulttype=core&format=json

15 April 2020

PubMed publication ID

32218446

1 reference