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United States Supreme Court decision

label	description	title	publication date	main subject	PubMed ID	PMCID	DOI	cites
Florida Lime and Avocado Growers								Ex parte Young
Zwickler v. Koota								McNeese v. Board of Education for Community Unit School District 187 Cahokia Illinois

academic journal article

label	description	title	publication date	main subject	PubMed ID	PMCID	DOI	cites
Publishing the research process	scientific journal editorial	en:Publishing the research process	2015-12-17				10.3897/rio.1.e7547	A Journal of Research Proposals

article

label	description	title	publication date	main subject	PubMed ID	PMCID	DOI	cites
The worldwide holoparasitic Apodanthaceae confidently placed in the Cucurbitales by nuclear and mitochondrial gene trees		en:The worldwide holoparasitic Apodanthaceae confidently placed in the Cucurbitales by nuclear and mitochondrial gene trees	2010		20663122	3055242	10.1186/1471-2148-10-219	Phylogenetic analysis of 83 plastid genes further resolves the early diversification of eudicots Mitochondrial DNA suggests at least 11 origins of parasitism in angiosperms and reveals genomic chimerism in parasitic plants Mitochondrial matR sequences help to resolve deep phylogenetic relationships in rosids transAlign: using amino acids to facilitate the multiple alignment of protein-coding DNA sequences Discovery of the photosynthetic relatives of the "Maltese mushroom" Cynomorium Phylogenetic inference in Rafflesiales: the influence of rate heterogeneity and horizontal gene transfer Mitochondrial DNA sequences reveal the photosynthetic relatives of Rafflesia, the world's largest flower ExPASy: The proteomics server for in-depth protein knowledge and analysis MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform Chloroplast gene sequence data suggest a single origin of the predisposition for symbiotic nitrogen fixation in angiosperms
A Report of the Curriculum Task Force of the ISCB Education Committee	scholarly article	en:A Report of the Curriculum Task Force of the ISCB Education Committee	2012		22761560	3386154	10.1371/journal.pcbi.1002570	Bioinformatics education--perspectives and challenges

biological database

label	description	title	publication date	main subject	PubMed ID	PMCID	DOI	cites
European Nucleotide Archive	Online database from the EBI on Nucleotides							Content discovery and retrieval services at the European Nucleotide Archive
The Japanese Genotype-phenotype Archive								The DDBJ Japanese Genotype-phenotype Archive for genetic and phenotypic human data
euL1db	curated and comprehensive summary of L1HS insertion polymorphisms identified in healthy or pathological human samples and published in peer-reviewed journals							euL1db: the European database of L1HS retrotransposon insertions in humans
Islander Database of Genomic Islands	Database on canonical genomic islands							Islander: a database of precisely mapped genomic islands in tRNA and tmRNA genes
MethBank	a DNA methylome programming database that integrates the genome-wide single-base nucleotide methylomes of gametes and early embryos in different model organisms							MethBank: a database integrating next-generation sequencing single-base-resolution DNA methylation programming data

book

label	description	title	publication date	main subject	PubMed ID	PMCID	DOI	cites
The Captive	book	fr:La Prisonnière	1923					View of Delft
Reinventing Discovery: The New Era of Networked Science	book	en:Reinventing Discovery: The New Era of Networked Science	2011					Experimental observation of lepton pairs of invariant mass around 95 GeV/c2 at the CERN SPS collider The Wealth of Networks A global initiative on sharing avian flu data As We May Think The Extended Mind Toward a new economics of science Predicting protein structures with a multiplayer online game In praise of tweaking Massively collaborative mathematics The Use of Knowledge in Society Article-level metrics and the evolution of scientific impact Cognitive Surplus Programming Collective Intelligence Sharing health data: good intentions are not enough Here Comes Everybody The Wisdom of Crowds 1918 Influenza: the mother of all pandemics The Double Helix A Bacterium That Can Grow by Using Arsenic Instead of Phosphorus Evidence for a Collective Intelligence Factor in the Performance of Human Groups
The Party Journalist	2012 non-fiction book by Patrick Conley	de:Der parteiliche Journalist	2012	Rundfunk der DDR radio propaganda radio documentary communist propaganda				What Is to Be Done? Imperialism, the Highest Stage of Capitalism

legal case

label	description	title	publication date	main subject	PubMed ID	PMCID	DOI	cites
Roe v. Wade	landmark decision by the US Supreme Court on the issue of abortion	en:Roe v. Wade 410 U.S. 113 (1973)						Gunn v. University Committee to End the War in Viet Nam Mitchell v. Donovan Carter v. Jury Commission of Greene County Florida Lime and Avocado Growers Lochner v. New York Flast v. Cohen Sierra Club v. Morton Golden v. Zwickler Truax v. Raich Southern Pacific Terminal Co. v. ICC Moore v. Ogilvie Carroll v. Princess Anne United States v. W. T. Grant Company Samuels v. Mackell Boyle v. Landry Perez v. Ledesma Dombrowski v. Pfister Epperson v. Arkansas Griswold v. Connecticut Eisenstadt v. Baird
Planned Parenthood v. Casey	1992 sentence of the United States Supreme Court	en:Planned Parenthood of Southeastern Pa. v. Casey 505 U.S. 833 (1992)						Roe v. Wade Webster v. Reproductive Health Services Thornburgh v. American College of Obstetricians and Gynecologists
Eisenstadt v. Baird								Griswold v. Connecticut Barrows v. Jackson
Gonzales v. Carhart	2007 United States Supreme Court case on abortion							Roe v. Wade Planned Parenthood v. Casey
Mitchell v. Donovan								Kennedy v. Mendoza-Martinez Rockefeller v. Catholic Medical Center of Brooklyn & Queens Zwickler v. Koota Phillips v. United States

literary work

label	description	title	publication date	main subject	PubMed ID	PMCID	DOI	cites
This is Biology: The Science of the Living World	literary work	en:This is Biology: The Science oft the Living World	1997					Sociobiology: The New Synthesis On the origin of species The Descent of Man, and Selection in Relation to Sex The Third Chimpanzee The Structure of Scientific Revolutions

scientific article

label	description	title	publication date	main subject	PubMed ID	PMCID	DOI	cites
Neutralizing antibodies against certain recently isolated viruses in the sera of human beings residing in East Africa	scientific article	en:Neutralizing antibodies against certain recently isolated viruses in the sera of human beings residing in East Africa	1952-08		14946416			Zika virus infections in Nigeria: virological and seroepidemiological investigations in Oyo State
Zika virus. I. Isolations and serological specificity	1952 scientific article	en:Zika virus. I. Isolations and serological specificity	1952-09	Zika virus Zika fever	12995440		10.1016/0035-9203(52)90042-4	The family relationship of encephalomyocarditis, Columbia-SK, M.M., and Mengo encephalomyelitis viruses Observations on the Diurnal Behaviour of the Redtail Monkey (Cercopithecus ascanius schmidti Matschie) in a Small Forest in Uganda Mengo Encephalomyelitis Virus. Isolation and Immunological Properties The relationship of Mengo encephalomyelitis, encephalomyocarditis, Columbia-SK and M.M. viruses Zika virus. II. Pathogenicity and physical properties Uganda S virus The mosquitoes of Bwamba County, Uganda; the vertical distribution and biting-cycle of mosquitoes in rain-forest, with further observations on microclimate Zika virus infections in Nigeria: virological and seroepidemiological investigations in Oyo State
Zika virus. II. Pathogenicity and physical properties	scientific article	en:Zika virus. II. Pathogenicity and physical properties	1952-09	Zika virus Zika fever	12995441		10.1016/0035-9203(52)90043-6	Uganda S virus Zika virus. I. Isolations and serological specificity The size of the virus of poliomyelitis as determined by ultrafiltration analysis Implication of the mosquito Aedes (Stegomyia) africanus Theobald in the forest cycle of yellow fever in Uganda The Epidemiology of Yellow Fever A simple method of estimating fifty per cent endpoints An outbreak of sylvan yellow fever in Uganda with Aëdes (Stegomyia) africanus Theobald as principal vector and insect host of the virus
Zika virus: further isolations in the Zika area, and some studies on the strains isolated	scientific article	en:Zika virus: further isolations in the Zika area, and some studies on the strains isolated	1958-05	Zika virus Zika fever	13556872		10.1016/0035-9203(58)90085-3	Zika virus infections in Nigeria: virological and seroepidemiological investigations in Oyo State
Techniques for hemagglutination and hemagglutination-inhibition with arthropod-borne viruses	scientific article	en:Techniques for hemagglutination and hemagglutination-inhibition with arthropod-borne viruses	1958-09		13571577			Zika virus infections in Nigeria: virological and seroepidemiological investigations in Oyo State
Yellow fever and other arthropod-borne viruses; a consideration of two serological surveys made in South Western Nigeria	scientific article	en:Yellow fever and other arthropod-borne viruses; a consideration of two serological surveys made in South Western Nigeria	1959-03		13647627			Zika virus infections in Nigeria: virological and seroepidemiological investigations in Oyo State
Zika Virus Infection in Man	scientific article	en:Zika Virus Infection in Man	1964-07	Zika virus Zika fever	14175744		10.1016/0035-9203(64)90201-9	Zika virus infections in Nigeria: virological and seroepidemiological investigations in Oyo State
Isolations of arboviruses in the Lagos area of Nigeria, and a survey of antibodies to them in man and animals	scientific article	en:Isolations of arboviruses in the Lagos area of Nigeria, and a survey of antibodies to them in man and animals	1968		4384491			Zika virus infections in Nigeria: virological and seroepidemiological investigations in Oyo State
Isolation of Zika virus from Aedes aegypti mosquitoes in Malaysia	scientific article	en:Isolation of Zika virus from Aedes aegypti mosquitoes in Malaysia	1969-05	Zika virus Zika fever Aedes aegypti	4976739			Zika virus infections in Nigeria: virological and seroepidemiological investigations in Oyo State
Immunologic studies with yellow fever and selected African group B arboviruses in rhesus and vervet monkeys	scientific article	en:Immunologic studies with yellow fever and selected African group B arboviruses in rhesus and vervet monkeys	1970-01		4984581			Zika virus infections in Nigeria: virological and seroepidemiological investigations in Oyo State
Epidemiological aspects of the 1969 yellow fever epidemic in Nigeria	scientific article	en:Epidemiological aspects of the 1969 yellow fever epidemic in Nigeria	1972		4538037	2480795		Zika virus infections in Nigeria: virological and seroepidemiological investigations in Oyo State
Serological survey for arboviruses in Igbo-Ora, western Nigeria	scientific article	en:Serological survey for arboviruses in Igbo-Ora, western Nigeria	1972-06		5038249			Zika virus infections in Nigeria: virological and seroepidemiological investigations in Oyo State
The 1970 yellow fever epidemic in Okwoga District Benue Plateau State, Nigeria. 2. Immunity survey to determine geographic limits and origins of the epidemic	scientific article	en:The 1970 yellow fever epidemic in Okwoga District Benue Plateau State, Nigeria. 2. Immunity survey to determine geographic limits and origins of the epidemic	1973		4545319	2481120		Zika virus infections in Nigeria: virological and seroepidemiological investigations in Oyo State
Arbovirus studies in Nupeko forest, a possible natural focus of yellow fever virus in Nigeria. I. Description of the area and serological survey of humans and other vertebrate hosts	scientific article	en:Arbovirus studies in Nupeko forest, a possible natural focus of yellow fever virus in Nigeria. I. Description of the area and serological survey of humans and other vertebrate hosts	1974		4206529			Zika virus infections in Nigeria: virological and seroepidemiological investigations in Oyo State
Arthropod-borne viral infections of man in Nigeria, 1964-1970	scientific article	en:Arthropod-borne viral infections of man in Nigeria, 1964-1970	1975-03		1124969		10.1080/00034983.1975.11686983	Zika virus infections in Nigeria: virological and seroepidemiological investigations in Oyo State
Malaria: the great umbrella	scientific article	en:Malaria: the great umbrella	1975-09		1058723	1749584		Zika virus infections in Nigeria: virological and seroepidemiological investigations in Oyo State
Yellow fever outbreak in South Eastern State of Nigeria--virological and serological studies	scientific article	en:Yellow fever outbreak in South Eastern State of Nigeria--virological and serological studies	1976-01		16295063			Zika virus infections in Nigeria: virological and seroepidemiological investigations in Oyo State
Dengue virus infections in Nigeria: a survey for antibodies in monkeys and humans	scientific article	en:Dengue virus infections in Nigeria: a survey for antibodies in monkeys and humans	1977		404737			Zika virus infections in Nigeria: virological and seroepidemiological investigations in Oyo State
Epidemiological investigations on arbovirus infections at Igbo-Ora, Nigeria	scientific article	en:Epidemiological investigations on arbovirus infections at Igbo-Ora, Nigeria	1977-06		906078			Zika virus infections in Nigeria: virological and seroepidemiological investigations in Oyo State
Zika virus infections in Nigeria: virological and seroepidemiological investigations in Oyo State	scientific article	en:Zika virus infections in Nigeria: virological and seroepidemiological investigations in Oyo State	1979-10	Zika virus Zika fever	489960	2129900	10.1017/s0022172400025997	Isolations of arboviruses in the Lagos area of Nigeria, and a survey of antibodies to them in man and animals Epidemiological aspects of the 1969 yellow fever epidemic in Nigeria Techniques for hemagglutination and hemagglutination-inhibition with arthropod-borne viruses Zika virus. I. Isolations and serological specificity Malaria: the great umbrella Epidemiological investigations on arbovirus infections at Igbo-Ora, Nigeria Yellow fever outbreak in South Eastern State of Nigeria--virological and serological studies Dengue virus infections in Nigeria: a survey for antibodies in monkeys and humans Serological survey for arboviruses in Igbo-Ora, western Nigeria Immunologic studies with yellow fever and selected African group B arboviruses in rhesus and vervet monkeys Yellow fever and other arthropod-borne viruses; a consideration of two serological surveys made in South Western Nigeria Isolation of Zika virus from Aedes aegypti mosquitoes in Malaysia Arthropod-borne viral infections of man in Nigeria, 1964-1970 The 1970 yellow fever epidemic in Okwoga District Benue Plateau State, Nigeria. 2. Immunity survey to determine geographic limits and origins of the epidemic Arbovirus studies in Nupeko forest, a possible natural focus of yellow fever virus in Nigeria. I. Description of the area and serological survey of humans and other vertebrate hosts Zika Virus Infection in Man Neutralizing antibodies against certain recently isolated viruses in the sera of human beings residing in East Africa Serologic studies of encephalitis in Japan. I. Hemagglutination-inhibiting, complement-fixing, and neutralizing antibody following overt Japanese B encephalitis Zika virus: further isolations in the Zika area, and some studies on the strains isolated
Yellow fever and Zika virus epizootics and enzootics in Uganda	scientific article	en:Yellow fever and Zika virus epizootics and enzootics in Uganda	1982	Zika virus Zika fever	6304948		10.1016/0035-9203(82)90161-4	Zika virus. I. Isolations and serological specificity An outbreak of sylvan yellow fever in Uganda with Aëdes (Stegomyia) africanus Theobald as principal vector and insect host of the virus A simple method of estimating fifty per cent endpoints A yellow fever epizootic in Zika forest, Uganda, during 1972: Part 1: Virus isolation and sentinel monkeys A yellow fever epizootic in Zika Forest, Uganda, during 1972: Part 2: Monkey serology Implication of the mosquito Aedes (Stegomyia) africanus Theobald in the forest cycle of yellow fever in Uganda Twelve isolations of Zika virus from Aedes (Stegomyia) africanus (Theobald) taken in and above a Uganda forest
PairWise and SearchWise: finding the optimal alignment in a simultaneous comparison of a protein profile against all DNA translation frames	scientific article	en:PairWise and SearchWise: finding the optimal alignment in a simultaneous comparison of a protein profile against all DNA translation frames	1996-07-15		8759004	145991		Analysis of the RNA-recognition motif and RS and RGG domains: conservation in metazoan pre-mRNA splicing factors The chromo shadow domain, a second chromo domain in heterochromatin-binding protein 1, HP1 Profile analysis: detection of distantly related proteins Improved tools for biological sequence comparison vav, a novel human oncogene derived from a locus ubiquitously expressed in hematopoietic cells Amino acid substitution matrices from protein blocks
Cytoplasmic dynein-mediated assembly of pericentrin and gamma tubulin onto centrosomes	scientific article	en:Cytoplasmic dynein-mediated assembly of pericentrin and gamma tubulin onto centrosomes	2000-06		10848628	14902		Dynactin is required for microtubule anchoring at centrosomes Cloning and characterization of a cDNA encoding an A-kinase anchoring protein located in the centrosome, AKAP450 Cyclin-dependent kinase control of centrosome duplication Opposing motor activities are required for the organization of the mammalian mitotic spindle pole Molecular characterization of the 50-kD subunit of dynactin reveals function for the complex in chromosome alignment and spindle organization during mitosis Cytoplasmic dynein binds dynactin through a direct interaction between the intermediate chains and p150Glued Cytoplasmic dynein plays a role in mammalian mitotic spindle formation Dynactin, a conserved, ubiquitously expressed component of an activator of vesicle motility mediated by cytoplasmic dynein Two activators of microtubule-based vesicle transport
Random circular permutation leading to chain disruption within and near alpha helices in the catalytic chains of aspartate transcarbamoylase: effects on assembly, stability, and function	scientific article	en:Random circular permutation leading to chain disruption within and near alpha helices in the catalytic chains of aspartate transcarbamoylase: effects on assembly, stability, and function	2001-03		11344321	2374132	10.1110/ps.39001	In vivo formation of allosteric aspartate transcarbamoylase containing circularly permuted catalytic polypeptide chains: implications for protein folding and assembly Extent of N-terminal methionine excision from Escherichia coli proteins is governed by the side-chain length of the penultimate amino acid
Comparison of work related fatal injuries in the United States, Australia, and New Zealand: method and overall findings	scientific article	en:Comparison of work related fatal injuries in the United States, Australia, and New Zealand: method and overall findings	2001-03		11289530	1730691	10.1136/ip.7.1.22	Trends in rates of occupational fatal injuries in the United States (1983-92) Effectiveness of source documents for identifying fatal occupational injuries: a synthesis of studies
Circular permutation of 5-aminolevulinate synthase. Mapping the polypeptide chain to its function	scientific article	en:Circular permutation of 5-aminolevulinate synthase. Mapping the polypeptide chain to its function	2001-06-01	cell biology	11279050	4547487	10.1074/jbc.M100329200	In vivo formation of allosteric aspartate transcarbamoylase containing circularly permuted catalytic polypeptide chains: implications for protein folding and assembly DNA sequencing with chain-terminating inhibitors
Circularly permuted proteins in the protein structure database	scientific article	en:Circularly permuted proteins in the protein structure database	2001-09		11514678	2253204	10.1110/ps.05801	The Protein Data Bank Molecular basis of glutathione synthetase deficiency and a rare gene permutation event The C2 domain calcium-binding motif: structural and functional diversity
Use of narrative analysis for comparisons of the causes of fatal accidents in three countries: New Zealand, Australia, and the United States	scientific article	en:Use of narrative analysis for comparisons of the causes of fatal accidents in three countries: New Zealand, Australia, and the United States	2001-09		11565965	1765408	10.1136/ip.7.suppl_1.i15	Comparison of work related fatal injuries in the United States, Australia, and New Zealand: method and overall findings
Sequence permutations in the molecular evolution of DNA methyltransferases	scientific article	en:Sequence permutations in the molecular evolution of DNA methyltransferases	2002-03-12		11914127	102321	10.1186/1471-2148-2-3	Behavior of restriction-modification systems as selfish mobile elements and their impact on genome evolution Archaeal adaptation to higher temperatures revealed by genomic sequence of Thermoplasma volcanium Gapped BLAST and PSI-BLAST: a new generation of protein database search programs Biology of DNA restriction Three-dimensional structure of the adenine-specific DNA methyltransferase M.Taq I in complex with the cofactor S-adenosylmethionine
Preparation of pure and intact Plasmodium falciparum plasma membrane vesicles and partial characterisation of the plasma membrane ATPase	scientific article	en:Preparation of pure and intact Plasmodium falciparum plasma membrane vesicles and partial characterisation of the plasma membrane ATPase	2002-04-26	infectious disease	12057016	111504	10.1186/1475-2875-1-6	Protein measurement with the Folin phenol reagent
High frequency of phenotypic deviations in Physcomitrella patens plants transformed with a gene-disruption library	scientific article	en:High frequency of phenotypic deviations in Physcomitrella patens plants transformed with a gene-disruption library	2002-07-18	Plant Science	12123528	117800	10.1186/1471-2229-2-6	Plant nuclear gene knockout reveals a role in plastid division for the homolog of the bacterial cell division protein FtsZ, an ancestral tubulin
History of human parasitology	scientific article	en:History of human parasitology	2002-10	infectious disease	12364371	126866	10.1128/CMR.15.4.595-612.2002	On some Peculiar Pigmented Cells Found in Two Mosquitos Fed on Malarial Blood On the Nature and Significance of the Crescentic and Flagellated Bodies in Malarial Blood ON THE HAEMATOZOAN INFECTIONS OF BIRDS The curse of Saint Thomas Schistosomiasis in antiquity
The effect of cigarette smoking on musculoskeletal-related disability	scientific article	en:The effect of cigarette smoking on musculoskeletal-related disability	2003-04		12645091	2141692	10.1002/ajim.10195	Getting to the truth: evaluating national tobacco countermarketing campaigns
Discovering novel cis-regulatory motifs using functional networks	scientific article	en:Discovering novel cis-regulatory motifs using functional networks	2003-05		12727907	430934	10.1101/gr.866403	Functional organization of the yeast proteome by systematic analysis of protein complexes Predicting gene regulatory elements in silico on a genomic scale Cluster analysis and display of genome-wide expression patterns
Clinical review: Severe malaria	Scientific Article about Malaria from Critical Care Journal	en:Clinical review: Severe malaria	2003-08	malaria	12930555	270697	10.1186/cc2183	Rapid diagnostic tests for malaria parasites
Loss of olfactory receptor genes coincides with the acquisition of full trichromatic vision in primates	scientific article	en:Loss of olfactory receptor genes coincides with the acquisition of full trichromatic vision in primates	2004-01		14737185	314465	10.1371/journal.pbio.0020005	Evolutionary deterioration of the vomeronasal pheromone transduction pathway in catarrhine primates Relaxed selective pressure on an essential component of pheromone transduction in primate evolution Human specific loss of olfactory receptor genes
pRb inactivation in mammary cells reveals common mechanisms for tumor initiation and progression in divergent epithelia	scientific article	en:pRb inactivation in mammary cells reveals common mechanisms for tumor initiation and progression in divergent epithelia	2004-02		14966529	340938	10.1371/journal.pbio.0020022	Identification of programmed cell death in situ via specific labeling of nuclear DNA fragmentation
GeneWise and Genomewise	scientific article	en:GeneWise and Genomewise	2004-05		15123596	479130	10.1101/gr.1865504	Initial sequencing and analysis of the human genome Using GeneWise in the Drosophila annotation experiment PairWise and SearchWise: finding the optimal alignment in a simultaneous comparison of a protein profile against all DNA translation frames
Malarone treatment failure not associated with previously described mutations in the cytochrome b gene	scientific article	en:Malarone treatment failure not associated with previously described mutations in the cytochrome b gene	2004-06-08	infectious disease	15186499	425592	10.1186/1475-2875-3-14	Different mutation patterns of atovaquone resistance to Plasmodium falciparum in vitro and in vivo: rapid detection of codon 268 polymorphisms in the cytochrome b as potential in vivo resistance marker Evidence of Plasmodium falciparum malaria resistant to atovaquone and proguanil hydrochloride: case reports Malarone treatment failure and in vitro confirmation of resistance of Plasmodium falciparum isolate from Lagos, Nigeria
Gametocytogenesis: the puberty of Plasmodium falciparum	scientific article	en:Gametocytogenesis: the puberty of Plasmodium falciparum	2004-07-14	infectious disease	15253774	497046	10.1186/1475-2875-3-24	The transcriptome of the intraerythrocytic developmental cycle of Plasmodium falciparum
Nicotine's defensive function in nature	scientific article	en:Nicotine's defensive function in nature	2004-08	nicotine	15314646	509292	10.1371/journal.pbio.0020217	Expression of an antisense prosystemin gene in tomato plants reduces resistance toward Manduca sexta larvae
Using narrative text and coded data to develop hazard scenarios for occupational injury interventions	scientific article	en:Using narrative text and coded data to develop hazard scenarios for occupational injury interventions	2004-08		15314055	1730109	10.1136/ip.2004.005181	An evaluation of a "best practices" musculoskeletal injury prevention program in nursing homes
Combinatorial codes in ventral temporal lobe for object recognition: Haxby (2001) revisited: is there a "face" area?	scientific article	en:Combinatorial codes in ventral temporal lobe for object recognition: Haxby (2001) revisited: is there a "face" area?	2004-09		15325362		10.1016/j.neuroimage.2004.05.020	Distributed and overlapping representations of faces and objects in ventral temporal cortex Distributed representation of objects in the human ventral visual pathway
Mutational activation of the MAP3K8 protooncogene in lung cancer	scientific article	en:Mutational activation of the MAP3K8 protooncogene in lung cancer	2004-10		15287022	3459321	10.1002/gcc.20069	NF-kappaB1 p105 negatively regulates TPL-2 MEK kinase activity Akt-dependent phosphorylation specifically regulates Cot induction of NF-kappa B-dependent transcription The oncogenic protein kinase Tpl-2/Cot contributes to Epstein-Barr virus-encoded latent infection membrane protein 1-induced NF-kappaB signaling downstream of TRAF2 Multiple mitogen-activated protein kinase signaling pathways connect the cot oncoprotein to the c-jun promoter and to cellular transformation Activation of MEK-1 and SEK-1 by Tpl-2 proto-oncoprotein, a novel MAP kinase kinase kinase The human cot proto-oncogene encodes two protein serine/threonine kinases with different transforming activities by alternative initiation of translation Structure and transforming potential of the human cot oncogene encoding a putative protein kinase
Genetic analysis of lice supports direct contact between modern and archaic humans	scientific article	en:Genetic analysis of lice supports direct contact between modern and archaic humans	2004-11		15502871	521174	10.1371/journal.pbio.0020340	No evidence of Neandertal mtDNA contribution to early modern humans Evidence for a genetic discontinuity between Neandertals and 24,000-year-old anatomically modern Europeans Statistical tests of neutrality of mutations The genetic drift of human papillomavirus type 16 is a means of reconstructing prehistoric viral spread and the movement of ancient human populations
Induced sputum assessment in New York City firefighters exposed to World Trade Center dust	scientific article	en:Induced sputum assessment in New York City firefighters exposed to World Trade Center dust	2004-11		15531443	1247622	10.1289/ehp.7233	Health and environmental consequences of the world trade center disaster Biomonitoring of chemical exposure among New York City firefighters responding to the World Trade Center fire and collapse Cough and Bronchial Responsiveness in Firefighters at the World Trade Center Site Characterization of the dust/smoke aerosol that settled east of the World Trade Center (WTC) in lower Manhattan after the collapse of the WTC 11 September 2001
Lung cancer in railroad workers exposed to diesel exhaust	scientific article	en:Lung cancer in railroad workers exposed to diesel exhaust	2004-11		15531439	1247618	10.1289/ehp.7195	Association between Chronic Obstructive Pulmonary Disease and Employment by Industry and Occupation in the US Population: A Study of Data from the Third National Health and Nutrition Examination Survey
Phylogeography and genetic ancestry of tigers (Panthera tigris)	scientific article	en:Phylogeography and genetic ancestry of tigers (Panthera tigris)	2004-12		15583716	534810	10.1371/journal.pbio.0020442	Inference of population structure using multilocus genotype data The CLUSTAL X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
Modern humans did not admix with Neanderthals during their range expansion into Europe	scientific article	en:Modern humans did not admix with Neanderthals during their range expansion into Europe	2004-12		15562317	532389	10.1371/journal.pbio.0020421	No evidence of Neandertal mtDNA contribution to early modern humans An early modern human from the Peştera cu Oase, Romania Evidence for a genetic discontinuity between Neandertals and 24,000-year-old anatomically modern Europeans Natural selection shaped regional mtDNA variation in humans Conflict between nuclear and mitochondrial DNA phylogenies of a recent species radiation: what mtDNA reveals and conceals about modes of speciation in Hawaiian crickets The Neandertal type site revisited: interdisciplinary investigations of skeletal remains from the Neander Valley, Germany The early Upper Paleolithic human skeleton from the Abrigo do Lagar Velho (Portugal) and modern human emergence in Iberia Hominids and hybrids: the place of Neanderthals in human evolution The probability of fixation in populations of changing size Paleolithic and neolithic lineages in the European mitochondrial gene pool
Automated generation of heuristics for biological sequence comparison	scientific article	en:Automated generation of heuristics for biological sequence comparison	2005		15713233	553969	10.1186/1471-2105-6-31	GeneWise and Genomewise Gapped BLAST and PSI-BLAST: a new generation of protein database search programs PairWise and SearchWise: finding the optimal alignment in a simultaneous comparison of a protein profile against all DNA translation frames
Maps of the Sri Lanka malaria situation preceding the tsunami and key aspects to be considered in the emergency phase and beyond	scientific article	en:Maps of the Sri Lanka malaria situation preceding the tsunami and key aspects to be considered in the emergency phase and beyond	2005-01-27	infectious disease	15676073	548668	10.1186/1475-2875-4-8	Sri Lanka malaria maps
Cobalamin-independent methionine synthase (MetE): a face-to-face double barrel that evolved by gene duplication	scientific article	en:Cobalamin-independent methionine synthase (MetE): a face-to-face double barrel that evolved by gene duplication	2005-02		15630480	539065	10.1371/journal.pbio.0030031	Crystal structure of human uroporphyrinogen decarboxylase
Airborne multidrug-resistant bacteria isolated from a concentrated swine feeding operation	scientific article	en:Airborne multidrug-resistant bacteria isolated from a concentrated swine feeding operation	2005-02		15687049	1277855	10.1289/ehp.7473	Antibiotics in dust originating from a pig-fattening farm: a new source of health hazard for farmers?
Hookworm: "the great infection of mankind"	scientific article	en:Hookworm: "the great infection of mankind"	2005-03		15783256	1069663	10.1371/journal.pmed.0020067	Human hookworm infection in the 21st century
Recent origin and cultural reversion of a hunter-gatherer group	scientific article	en:Recent origin and cultural reversion of a hunter-gatherer group	2005-03		15736978	1044832	10.1371/journal.pbio.0030071	Reduced Y-chromosome, but not mitochondrial DNA, diversity in human populations from West New Guinea The genetic origins of the Andaman Islanders mtDNA variation in the South African Kung and Khwe-and their genetic relationships to other African populations Description and power analysis of two tests for detecting recent population bottlenecks from allele frequency data Length mutations in human mitochondrial DNA: direct sequencing of enzymatically amplified DNA Mitochondrial DNA sequences in single hairs from a southern African population
Highly nonrandom features of synaptic connectivity in local cortical circuits	scientific article	en:Highly nonrandom features of synaptic connectivity in local cortical circuits	2005-03		15737062	1054880	10.1371/journal.pbio.0030068	Search for computational modules in the C. elegans brain Serial block-face scanning electron microscopy to reconstruct three-dimensional tissue nanostructure Receptive fields, binocular interaction and functional architecture in the cat's visual cortex
Partially distributed representations of objects and faces in ventral temporal cortex	scientific article	en:Partially distributed representations of objects and faces in ventral temporal cortex	2005-04		15829079		10.1162/0898929053467550	Distributed and overlapping representations of faces and objects in ventral temporal cortex Distributed representation of objects in the human ventral visual pathway
Relations in biomedical ontologies	scientific article	en:Relations in biomedical ontologies	2005-04-28	ontology biomedicine	15892874	1175958	10.1186/gb-2005-6-5-r46	An ontology for cell types
The third age of phage	scientific article	en:The third age of phage	2005-05		15884981	1110918	10.1371/journal.pbio.0030182	Three Prochlorococcus cyanophage genomes: signature features and ecological interpretations Transfer of photosynthesis genes to and from Prochlorococcus viruses Genomic analysis of uncultured marine viral communities Virioplankton: viruses in aquatic ecosystems
Three-dimensional maps of all chromosomes in human male fibroblast nuclei and prometaphase rosettes	scientific article	en:Three-dimensional maps of all chromosomes in human male fibroblast nuclei and prometaphase rosettes	2005-05		15839726	1084335	10.1371/journal.pbio.0030157	Tissue-specific spatial organization of genomes Accumulation of mutant lamin A causes progressive changes in nuclear architecture in Hutchinson-Gilford progeria syndrome
Pseudogenization of a sweet-receptor gene accounts for cats' indifference toward sugar	scientific article	en:Pseudogenization of a sweet-receptor gene accounts for cats' indifference toward sugar	2005-07		16103917	1183522	10.1371/journal.pgen.0010003	Biochemical enrichment and biophysical characterization of a taste receptor for L-arginine from the catfish, Ictalurus puntatus Loss of olfactory receptor genes coincides with the acquisition of full trichromatic vision in primates Human specific loss of olfactory receptor genes Human receptors for sweet and umami taste
Calories do not explain extension of life span by dietary restriction in Drosophila	scientific article	en:Calories do not explain extension of life span by dietary restriction in Drosophila	2005-07		16000018	1140680	10.1371/journal.pbio.0030223	Sir2 mediates longevity in the fly through a pathway related to calorie restriction Regulation of lifespan in Drosophila by modulation of genes in the TOR signaling pathway
A short guided tour through functional and structural features of saposin-like proteins	scientific article	en:A short guided tour through functional and structural features of saposin-like proteins	2005-07-15	cell biology	15992358	1175101	10.1042/BJ20050051	Saposin C promotes survival and prevents apoptosis via PI3K/Akt-dependent pathway in prostate cancer cells The lysosomal trafficking of sphingolipid activator proteins (SAPs) is mediated by sortilin MSAP is a novel MIR-interacting protein that enhances neurite outgrowth and increases myosin regulatory light chain Crystal structure of saposin B reveals a dimeric shell for lipid binding Bacteriocin AS-48, a microbial cyclic polypeptide structurally and functionally related to mammalian NK-lysin Crystal structure of plant aspartic proteinase prophytepsin: inactivation and vacuolar targeting Selection of cDNAs encoding putative type II membrane proteins on the cell surface from a human full-length cDNA bank An antimicrobial activity of cytolytic T cells mediated by granulysin Acid sphingomyelinase possesses a domain homologous to its activator proteins: saposins B and D Saposin A: second cerebrosidase activator protein Characterization of a mutation in a family with saposin B deficiency: a glycosylation site defect Binding and transport of gangliosides by prosaposin
How malaria has affected the human genome and what human genetics can teach us about malaria	scientific article	en:How malaria has affected the human genome and what human genetics can teach us about malaria	2005-08	malaria	16001361	1224522	10.1086/432519	An immune basis for malaria protection by the sickle cell trait The global distribution of clinical episodes of Plasmodium falciparum malaria Extended linkage disequilibrium surrounding the hemoglobin E variant due to malarial selection Protection afforded by sickle-cell trait against subtertian malareal infection Complex signatures of natural selection at the Duffy blood group locus Inherited haemoglobin disorders: an increasing global health problem Detection of the signature of natural selection in humans: evidence from the Duffy blood group locus Emergence of FY*A(null) in a Plasmodium vivax-endemic region of Papua New Guinea Protection against malaria morbidity: near-fixation of the alpha-thalassemia gene in a Nepalese population A malaria invasion receptor, the 175-kilodalton erythrocyte binding antigen of Plasmodium falciparum recognizes the terminal Neu5Ac(alpha 2-3)Gal- sequences of glycophorin A
Characterizing exposures to nonpersistent pesticides during pregnancy and early childhood in the National Children's Study: a review of monitoring and measurement methodologies	scientific article	en:Characterizing exposures to nonpersistent pesticides during pregnancy and early childhood in the National Children's Study: a review of monitoring and measurement methodologies	2005-08		16079084	1280354	10.1289/ehp.7769	Lessons learned for the assessment of children's pesticide exposure: critical sampling and analytical issues for future studies Exposure assessment implications for the design and implementation of the National Children's Study Biologic monitoring of exposure to environmental chemicals throughout the life stages: requirements and issues for consideration for the National Children's Study Exposure assessment in the National Children's Study: introduction Assessing exposure to organophosphorus pesticides by biomonitoring in epidemiologic studies of birth outcomes Urinary creatinine concentrations in the U.S. population: implications for urinary biologic monitoring measurements Prenatal insecticide exposures and birth weight and length among an urban minority cohort Association of in utero organophosphate pesticide exposure and fetal growth and length of gestation in an agricultural population In utero pesticide exposure, maternal paraoxonase activity, and head circumference Concentrations of dialkyl phosphate metabolites of organophosphorus pesticides in the U.S. population Use of biomarkers to indicate exposure of children to organophosphate pesticides: implications for a longitudinal study of children's environmental health Measurement of pesticides and other toxicants in amniotic fluid as a potential biomarker of prenatal exposure: a validation study Historical pesticide exposure in California using pesticide use reports and land-use surveys: an assessment of misclassification error and bias Contemporary-use pesticides in personal air samples during pregnancy and blood samples at delivery among urban minority mothers and newborns Developmental neurotoxicity elicited by prenatal or postnatal chlorpyrifos exposure: effects on neurospecific proteins indicate changing vulnerabilities Predicting children's short-term exposure to pesticides: results of a questionnaire screening approach Exposure to indoor pesticides during pregnancy in a multiethnic, urban cohort Temporal association of children's pesticide exposure and agricultural spraying: report of a longitudinal biological monitoring study Chemical contaminants in breast milk and their impacts on children's health: an overview Children's exposure to chlorpyrifos and parathion in an agricultural community in central Washington State Residential pesticide use during pregnancy among a cohort of urban minority women Childhood cancer and agricultural pesticide use: an ecologic study in California Analysis of aggregate exposure to chlorpyrifos in the NHEXAS-Maryland investigation Distribution of 2,4-D in air and on surfaces inside residences after lawn applications: comparing exposure estimates from various media for young children Agricultural pesticide use in California: pesticide prioritization, use densities, and population distributions for a childhood cancer study Measurement of children's exposure to pesticides: analysis of urinary metabolite levels in a probability-based sample Measurement of organophosphate metabolites in postpartum meconium as a potential biomarker of prenatal exposure: a validation study Longitudinal investigation of dietary exposure to selected pesticides Pesticides in household dust and soil: exposure pathways for children of agricultural families DERMAL EXPOSURE ASSESSMENT TECHNIQUES
Malaria attributable to the HIV-1 epidemic, sub-Saharan Africa	scientific article	en:Malaria attributable to the HIV-1 epidemic, sub-Saharan Africa	2005-09	infectious disease	16229771	3310631	10.3201/eid1109.050337	Progression to symptomatic disease in people infected with HIV-1 in rural Uganda: prospective cohort study
Two rounds of whole genome duplication in the ancestral vertebrate	scientific article	en:Two rounds of whole genome duplication in the ancestral vertebrate	2005-10		16128622	1197285	10.1371/journal.pbio.0030314	Widespread paleopolyploidy in model plant species inferred from age distributions of duplicate genes Gene order evolution and paleopolyploidy in hemiascomycete yeasts Were vertebrates octoploid? The probability of preservation of a newly arisen gene duplicate Initial sequencing and analysis of the human genome CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
Principles for characterizing the potential human health effects from exposure to nanomaterials: elements of a screening strategy	scientific article	en:Principles for characterizing the potential human health effects from exposure to nanomaterials: elements of a screening strategy	2005-10-06		16209704	1260029	10.1186/1743-8977-2-8	Nanotoxicology: an emerging discipline evolving from studies of ultrafine particles The influence of hydrogen peroxide and histamine on lung permeability and translocation of iridium nanoparticles in the isolated perfused rat lung Unusual inflammatory and fibrogenic pulmonary responses to single-walled carbon nanotubes in mice Nanotechnology: looking as we leap Nanotoxicology Manufactured nanomaterials (fullerenes, C60) induce oxidative stress in the brain of juvenile largemouth bass Ultrafine particulate pollutants induce oxidative stress and mitochondrial damage Asthma and PM10 Number concentration and size of particles in urban air: effects on spirometric lung function in adult asthmatic subjects
A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/Cas subtypes exist in prokaryotic genomes	scientific article	en:A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/Cas subtypes exist in prokaryotic genomes	2005-11		16292354	1282333	10.1371/journal.pcbi.0010060	The TIGRFAMs database of protein families Identification of 86 candidates for small non-messenger RNAs from the archaeon Archaeoglobus fulgidus The complete genome of the crenarchaeon Sulfolobus solfataricus P2 Nucleotide sequence of the iap gene, responsible for alkaline phosphatase isozyme conversion in Escherichia coli, and identification of the gene product
The cell nucleus and aging: tantalizing clues and hopeful promises	scientific article	en:The cell nucleus and aging: tantalizing clues and hopeful promises	2005-11		16277559	1283398	10.1371/journal.pbio.0030395	Inhibiting farnesylation of progerin prevents the characteristic nuclear blebbing of Hutchinson-Gilford progeria syndrome Reversal of the cellular phenotype in the premature aging disease Hutchinson-Gilford progeria syndrome Accumulation of mutant lamin A causes progressive changes in nuclear architecture in Hutchinson-Gilford progeria syndrome
The case for selection at CCR5-Delta32	scientific article	en:The case for selection at CCR5-Delta32	2005-11		16248677	1275522	10.1371/journal.pbio.0030378	A scan for positively selected genes in the genomes of humans and chimpanzees Reappraisal of the historical selective pressures for the CCR5-Delta32 mutation Population history and natural selection shape patterns of genetic variation in 132 genes Hitchhiking under positive Darwinian selection Dating the origin of the CCR5-Delta32 AIDS-resistance allele by the coalescence of haplotypes
Serotonin and depression: a disconnect between the advertisements and the scientific literature	scientific article	en:Serotonin and depression: a disconnect between the advertisements and the scientific literature	2005-12		16268734	1277931	10.1371/journal.pmed.0020392	Acute treatment of moderate to severe depression with hypericum extract WS 5570 (St John's wort): randomised controlled double blind non-inferiority trial versus paroxetine
Rooting the tree of life by transition analyses	scientific article	en:Rooting the tree of life by transition analyses	2006		16834776	1586193	10.1186/1745-6150-1-19	Prevalence and evolution of core photosystem II genes in marine cyanobacterial viruses and their hosts Eukaryotic organisms in Proterozoic oceans The origin and evolution of Archaea: a state of the art Cell evolution and Earth history: stasis and revolution A fresh look at the fossil evidence for early Archaean cellular life Fossil evidence of Archaean life The genome of Salinibacter ruber: convergence and gene exchange among hyperhalophilic bacteria and archaea Histones in crenarchaea Evolutionary origins of genomic repertoires in bacteria Evolutionary relationships of Fusobacterium nucleatum based on phylogenetic analysis and comparative genomics Components of coated vesicles and nuclear pore complexes share a common molecular architecture Gene replacement of fructose-1,6-bisphosphate aldolase supports the hypothesis of a single photosynthetic ancestor of chromalveolates Genome sequence of Symbiobacterium thermophilum, an uncultivable bacterium that depends on microbial commensalism The planetary biology of cytochrome P450 aromatases Only six kingdoms of life A methylated phosphate group and four amide-linked acyl chains in leptospira interrogans lipid A. The membrane anchor of an unusual lipopolysaccharide that activates TLR2 From gene trees to organismal phylogeny in prokaryotes: the case of the gamma-Proteobacteria Complete genome sequence of the marine planctomycete Pirellula sp. strain 1 A complex microbiota from snowball Earth times: microfossils from the Neoproterozoic Kingston Peak Formation, Death Valley, USA On the origins of cells: a hypothesis for the evolutionary transitions from abiotic geochemistry to chemoautotrophic prokaryotes, and from prokaryotes to nucleated cells Evolutionary analysis of Arabidopsis, cyanobacterial, and chloroplast genomes reveals plastid phylogeny and thousands of cyanobacterial genes in the nucleus Prediction of signal recognition particle RNA genes A phylogenomic approach to bacterial phylogeny: evidence of a core of genes sharing a common history The yeast RER2 gene, identified by endoplasmic reticulum protein localization mutations, encodes cis-prenyltransferase, a key enzyme in dolichol synthesis The universal ancestor There must be a prokaryote somewhere: microbiology's search for itself Bacterial evolution Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya
Daily temperature profiles in and around Western Kenyan larval habitats of Anopheles gambiae as related to egg mortality	scientific article	en:Daily temperature profiles in and around Western Kenyan larval habitats of Anopheles gambiae as related to egg mortality	2006	infectious disease	17038186	1617108	10.1186/1475-2875-5-87	Egg hatching, larval movement and larval survival of the malaria vector Anopheles gambiae in desiccating habitats
Methylene blue for malaria in Africa: results from a dose-finding study in combination with chloroquine	scientific article	en:Methylene blue for malaria in Africa: results from a dose-finding study in combination with chloroquine	2006	infectious disease	17026773	1617109	10.1186/1475-2875-5-84	Safety of the methylene blue plus chloroquine combination in the treatment of uncomplicated falciparum malaria in young children of Burkina Faso [ISRCTN27290841]
Low autochtonous urban malaria in Antananarivo (Madagascar)	scientific article	en:Low autochtonous urban malaria in Antananarivo (Madagascar)	2006	infectious disease	16573843	1484484	10.1186/1475-2875-5-27	Malaria and urbanization in sub-Saharan Africa Q24790973
IMP PCR primers detect single nucleotide polymorphisms for Anopheles gambiae species identification, Mopti and Savanna rDNA types, and resistance to dieldrin in Anopheles arabiensis	scientific article	en:IMP PCR primers detect single nucleotide polymorphisms for Anopheles gambiae species identification, Mopti and Savanna rDNA types, and resistance to dieldrin in Anopheles arabiensis	2006	infectious disease	17177993	1769388	10.1186/1475-2875-5-125	Molecular phylogeny of the Anopheles gambiae complex suggests genetic introgression between principal malaria vectors
The co-distribution of Plasmodium falciparum and hookworm among African schoolchildren	scientific article	en:The co-distribution of Plasmodium falciparum and hookworm among African schoolchildren	2006	infectious disease	17083720	1635726	10.1186/1475-2875-5-99	The malaria Atlas Project: developing global maps of malaria risk Malaria and helminth interactions in humans: an epidemiological viewpoint Global epidemiology, ecology and control of soil-transmitted helminth infections The global distribution of clinical episodes of Plasmodium falciparum malaria The relationship between the Plasmodium falciparum parasite ratio in childhood and climate estimates of malaria transmission in Kenya
Human malarial disease: a consequence of inflammatory cytokine release	scientific article	en:Human malarial disease: a consequence of inflammatory cytokine release	2006	infectious disease	17029647	1629020	10.1186/1475-2875-5-85	Bone marrow suppression and severe anaemia associated with persistent Plasmodium falciparum infection in African children with microscopically undetectable parasitaemia The microcirculation is the motor of sepsis Assessment of volume depletion in children with malaria Q24806126 Tissue distribution of migration inhibitory factor and inducible nitric oxide synthase in falciparum malaria and sepsis in African children Clinical review: Myocardial depression in sepsis and septic shock Possible importance of macrophage-derived mediators in acute malaria An endotoxin-induced serum factor that causes necrosis of tumors
Detection and identification of human Plasmodium species with real-time quantitative nucleic acid sequence-based amplification	scientific article	en:Detection and identification of human Plasmodium species with real-time quantitative nucleic acid sequence-based amplification	2006	infectious disease	17018138	1592503	10.1186/1475-2875-5-80	Real-time nucleic acid sequence-based amplification is more convenient than real-time PCR for quantification of Plasmodium falciparum Rapid diagnostic tests for malaria parasites
Using green fluorescent malaria parasites to screen for permissive vector mosquitoes	scientific article	en:Using green fluorescent malaria parasites to screen for permissive vector mosquitoes	2006	infectious disease	16569221	1450296	10.1186/1475-2875-5-23	Conditional mutagenesis using site-specific recombination in Plasmodium berghei Cell-passage activity is required for the malarial parasite to cross the liver sinusoidal cell layer
Taxonomic reliability of DNA sequences in public sequence databases: a fungal perspective	scientific article	en:Taxonomic reliability of DNA sequences in public sequence databases: a fungal perspective	2006		17183689	1762357	10.1371/journal.pone.0000059	DNA barcoding: error rates based on comprehensive sampling Defining operational taxonomic units using DNA barcode data Approaching the taxonomic affiliation of unidentified sequences in public databases--an example from the mycorrhizal fungi DNA barcoding: promise and pitfalls Biological identifications through DNA barcodes Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
Higher urine 1-hydroxy pyrene glucuronide (1-OHPG) is associated with tobacco smoke exposure and drinking maté in healthy subjects from Rio Grande do Sul, Brazil	scientific article	en:Higher urine 1-hydroxy pyrene glucuronide (1-OHPG) is associated with tobacco smoke exposure and drinking maté in healthy subjects from Rio Grande do Sul, Brazil	2006		16729889	1539013	10.1186/1471-2407-6-139	Health impacts of domestic coal use in China Urinary excretion of 1-hydroxypyrene as a marker for exposure to urban air levels of polycyclic aromatic hydrocarbons Interindividual differences in the concentration of 1-hydroxypyrene-glucuronide in urine and polycyclic aromatic hydrocarbon-DNA adducts in peripheral white blood cells after charbroiled beef consumption Association of exposure to polycyclic aromatic hydrocarbons (estimated from job category) with concentration of 1-hydroxypyrene glucuronide in urine from workers at a steel plant
Long-term cyclical in vivo loading increases cartilage proteoglycan content in a spatially specific manner: an infrared microspectroscopic imaging and polarized light microscopy study	scientific article	en:Long-term cyclical in vivo loading increases cartilage proteoglycan content in a spatially specific manner: an infrared microspectroscopic imaging and polarized light microscopy study	2006		16956418	1779443	10.1186/ar2040	Collagen of articular cartilage Molecular cloning and expression of human UDP-d-Xylose:proteoglycan core protein beta-d-xylosyltransferase and its first isoform XT-II Structure of the human aggrecan gene: exon-intron organization and association with the protein domains
RNA viral community in human feces: prevalence of plant pathogenic viruses	scientific article	en:RNA viral community in human feces: prevalence of plant pathogenic viruses	2006-01		16336043	1310650	10.1371/journal.pbio.0040003	Genomic analysis of uncultured marine viral communities The Phage Proteomic Tree: a genome-based taxonomy for phage Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
Modulation of tumor necrosis factor by microbial pathogens	scientific article	en:Modulation of tumor necrosis factor by microbial pathogens	2006-02		16518473	1383482	10.1371/journal.ppat.0020004	Evolutionarily divergent herpesviruses modulate T cell activation by targeting the herpesvirus entry mediator cosignaling pathway The intriguing biology of the tumour necrosis factor/tumour necrosis factor receptor superfamily: players, rules and the games Chlamydia inhibit host cell apoptosis by degradation of proapoptotic BH3-only proteins Hepatitis C virus NS5A as a potential viral Bcl-2 homologue interacts with Bax and inhibits apoptosis in hepatocellular carcinoma Induction of TNF receptor I-mediated apoptosis via two sequential signaling complexes The hepatitis C virus NS2 protein is an inhibitor of CIDE-B-induced apoptosis The human immunodeficiency virus type 1 accessory protein Vpu induces apoptosis by suppressing the nuclear factor kappaB-dependent expression of antiapoptotic factors Prevention of constitutive TNF receptor 1 signaling by silencer of death domains
Efficacy of the North American guidelines for children's agricultural tasks in reducing childhood agricultural injuries	scientific article	en:Efficacy of the North American guidelines for children's agricultural tasks in reducing childhood agricultural injuries	2006-04		16507741	1470549	10.2105/AJPH.2003.035428	Parental knowledge of child development and the assignment of tractor work to children
Detection of norovirus capsid protein in authentic standards and in stool extracts by matrix-assisted laser desorption ionization and nanospray mass spectrometry	scientific article	en:Detection of norovirus capsid protein in authentic standards and in stool extracts by matrix-assisted laser desorption ionization and nanospray mass spectrometry	2006-04	food science Applied Microbiology and Biotechnology	16597979	1449043	10.1128/AEM.72.4.2749-2755.2006	Identification and phenotypic characterization of Sphingomonas wittichii strain RW1 by peptide mass fingerprinting using matrix-assisted laser desorption ionization-time of flight mass spectrometry Prevalence of norovirus among visitors from the United States to Mexico and Guatemala who experience traveler's diarrhea Norovirus and foodborne disease, United States, 1991-2000
Citation advantage of open access articles	scientific article	en:Citation advantage of open access articles	2006-05		16683865	1459247	10.1371/journal.pbio.0040157	Going, going, still there: using the WebCite service to permanently archive cited web pages
Biomonitoring of exposure in farmworker studies	scientific article	en:Biomonitoring of exposure in farmworker studies	2006-06		16759998	1480485	10.1289/ehp.8527	Workplace, household, and personal predictors of pesticide exposure for farmworkers Biologic monitoring of exposure to environmental chemicals throughout the life stages: requirements and issues for consideration for the National Children's Study Urinary creatinine concentrations in the U.S. population: implications for urinary biologic monitoring measurements Glyphosate biomonitoring for farmers and their families: results from the Farm Family Exposure Study Agricultural task and exposure to organophosphate pesticides among farmworkers Assessing human exposure to phthalates using monoesters and their oxidized metabolites as biomarkers Evaluation of take-home organophosphorus pesticide exposure among agricultural workers and their children Temporal association of children's pesticide exposure and agricultural spraying: report of a longitudinal biological monitoring study Determinants of chlorpyrifos exposures and urinary 3,5,6-trichloro-2-pyridinol levels among termiticide applicators Biological monitoring survey of organophosphorus pesticide exposure among pre-school children in the Seattle metropolitan area
A survey of laboratory and statistical issues related to farmworker exposure studies	scientific article	en:A survey of laboratory and statistical issues related to farmworker exposure studies	2006-06		16760001	1480509	10.1289/ehp.8528	Urinary creatinine concentrations in the U.S. population: implications for urinary biologic monitoring measurements Epidemiologic evaluation of measurement data in the presence of detection limits Detecting Patterns of Occupational Illness Clustering with Alternating Logistic Regressions Applied to Longitudinal Data Children's exposure to chlorpyrifos and parathion in an agricultural community in central Washington State Distribution of 2,4-D in air and on surfaces inside residences after lawn applications: comparing exposure estimates from various media for young children A COMPREHENSIVE EVALUATION OF WITHIN- AND BETWEEN-WORKER COMPONENTS OF OCCUPATIONAL EXPOSURE TO CHEMICAL AGENTS
Global patterns of geographic range size in birds	scientific article	en:Global patterns of geographic range size in birds	2006-07		16774453	1479698	10.1371/journal.pbio.0040208	Hemispheric asymmetries in biodiversity--a serious matter for ecology
Carrageenan is a potent inhibitor of papillomavirus infection	scientific article	en:Carrageenan is a potent inhibitor of papillomavirus infection	2006-07		16839203	1500806	10.1371/journal.ppat.0020069	Review of harmful gastrointestinal effects of carrageenan in animal experiments Human papillomavirus infection requires cell surface heparan sulfate
DNA detection using recombination proteins	scientific article	en:DNA detection using recombination proteins	2006-07		16756388	1475771	10.1371/journal.pbio.0040204	The evolutionary history of methicillin-resistant Staphylococcus aureus (MRSA)
Cancer mortality in workers exposed to organochlorine compounds in the pulp and paper industry: an international collaborative study	scientific article	en:Cancer mortality in workers exposed to organochlorine compounds in the pulp and paper industry: an international collaborative study	2006-07		16835051	1513323	10.1289/ehp.8588	Listing occupational carcinogens Mortality from lung cancer in workers exposed to sulfur dioxide in the pulp and paper industry Cancer mortality in workers exposed to phenoxy herbicides, chlorophenols, and dioxins. An expanded and updated international cohort study
Immunomodulatory effects of maternal atrazine exposure on male Balb/c mice	scientific article	en:Immunomodulatory effects of maternal atrazine exposure on male Balb/c mice	2006-07-01		16443249	2034295	10.1016/j.taap.2005.12.006	The Polysaccharide Antibody Response after Streptococcus pneumoniae Vaccination Is Differentially Enhanced or Suppressed by 3,4-Dichloropropionanilide and 2,4-Dichlorophenoxyacetic Acid Biological Monitoring for Selected Herbicide Biomarkers in the Urine of Exposed Custom Applicators: Application of Mixed-effect Models Effects of chloro-s-triazine herbicides and metabolites on aromatase activity in various human cell lines and on vitellogenin production in male carp hepatocytes Measurement of children's exposure to pesticides: analysis of urinary metabolite levels in a probability-based sample Prenatal immunotoxicant exposure and postnatal autoimmune disease
Arsenic exposure is associated with decreased DNA repair in vitro and in individuals exposed to drinking water arsenic	scientific article	en:Arsenic exposure is associated with decreased DNA repair in vitro and in individuals exposed to drinking water arsenic	2006-08		16882524	1552016	10.1289/ehp.9008	Developmentally restricted genetic determinants of human arsenic metabolism: association between urinary methylated arsenic and CYT19 polymorphisms in children Genomic and proteomic profiling of responses to toxic metals in human lung cells
Recent common ancestry of Ebola Zaire virus found in a bat reservoir	scientific article	en:Recent common ancestry of Ebola Zaire virus found in a bat reservoir	2006-10		17069458	1626099	10.1371/journal.ppat.0020090	Wave-like spread of Ebola Zaire Experimental inoculation of plants and animals with Ebola virus
Methods of blinding in reports of randomized controlled trials assessing pharmacologic treatments: a systematic review	scientific article	en:Methods of blinding in reports of randomized controlled trials assessing pharmacologic treatments: a systematic review	2006-10		17076559	1626553	10.1371/journal.pmed.0030425	Comparison of descriptions of allocation concealment in trial protocols and the published reports: cohort study
To lose both would look like carelessness: Tasmanian devil facial tumour disease	scientific article	en:To lose both would look like carelessness: Tasmanian devil facial tumour disease	2006-10		17048985	1617348	10.1371/journal.pbio.0040342	Clonal origin and evolution of a transmissible cancer Chytridiomycosis causes amphibian mortality associated with population declines in the rain forests of Australia and Central America
The mechanistic classification of addictive drugs	scientific article	en:The mechanistic classification of addictive drugs	2006-11		17105338	1635740	10.1371/journal.pmed.0030437	Abolished cocaine reward in mice with a cocaine-insensitive dopamine transporter
Drosophila NMNAT maintains neural integrity independent of its NAD synthesis activity	scientific article	en:Drosophila NMNAT maintains neural integrity independent of its NAD synthesis activity	2006-11		17132048	1665629	10.1371/journal.pbio.0040416	BEHAVIORAL MUTANTS OF Drosophila ISOLATED BY COUNTERCURRENT DISTRIBUTION A local mechanism mediates NAD-dependent protection of axon degeneration Characterization of recombinant human nicotinamide mononucleotide adenylyl transferase (NMNAT), a nuclear enzyme essential for NAD synthesis Molecular cloning, chromosomal localization, tissue mRNA levels, bacterial expression, and enzymatic properties of human NMN adenylyltransferase Parkin suppresses unfolded protein stress-induced cell death through its E3 ubiquitin-protein ligase activity
Evaluating support for the current classification of eukaryotic diversity	scientific article	en:Evaluating support for the current classification of eukaryotic diversity	2006-12		17194223	1713255	10.1371/journal.pgen.0020220	Simplicity and complexity of microsporidian genomes Gene replacement of fructose-1,6-bisphosphate aldolase supports the hypothesis of a single photosynthetic ancestor of chromalveolates Only six kingdoms of life The twilight of Heliozoa and rise of Rhizaria, an emerging supergroup of amoeboid eukaryotes Evolutionary analysis of Arabidopsis, cyanobacterial, and chloroplast genomes reveals plastid phylogeny and thousands of cyanobacterial genes in the nucleus The analysis of 100 genes supports the grouping of three highly divergent amoebae: Dictyostelium, Entamoeba, and Mastigamoeba A novel clade of protistan parasites near the animal-fungal divergence Animals and fungi are each other's closest relatives: congruent evidence from multiple proteins The DNA of ciliated protozoa Eukaryote Kingdoms: Seven or Nine?
Impact of extended-duration shifts on medical errors, adverse events, and attentional failures	scientific article	en:Impact of extended-duration shifts on medical errors, adverse events, and attentional failures	2006-12 2006-12-12		17194188	1705824	10.1371/journal.pmed.0030487	Extended Work Shifts and the Risk of Motor Vehicle Crashes among Interns Effect of Reducing Interns' Work Hours on Serious Medical Errors in Intensive Care Units Effect of Reducing Interns' Weekly Work Hours on Sleep and Attentional Failures
Assembling a global database of malaria parasite prevalence for the Malaria Atlas Project	Scientific Article about Malaria from Malaria Journal	en:Assembling a global database of malaria parasite prevalence for the Malaria Atlas Project	2007	infectious disease	17306022	1805762	10.1186/1475-2875-6-17	The malaria Atlas Project: developing global maps of malaria risk Sri Lanka malaria maps Genome sequence of the human malaria parasite Plasmodium falciparum PubMed Central: The GenBank of the published literature
Treatment of Fabry disease: outcome of a comparative trial with agalsidase alfa or beta at a dose of 0.2 mg/kg	scientific article	en:Treatment of Fabry disease: outcome of a comparative trial with agalsidase alfa or beta at a dose of 0.2 mg/kg	2007		17622343	1913555	10.1371/journal.pone.0000598	Comparison of the effects of agalsidase alfa and agalsidase beta on cultured human Fabry fibroblasts and Fabry mice Long-term safety and efficacy of enzyme replacement therapy for Fabry disease
Annelid phylogeny and the status of Sipuncula and Echiura	scientific article	en:Annelid phylogeny and the status of Sipuncula and Echiura	2007		17411434	1855331	10.1186/1471-2148-7-57	Molecular evidence that echiurans and pogonophorans are derived annelids CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
Total and functional parasite specific IgE responses in Plasmodium falciparum-infected patients exhibiting different clinical status	scientific article	en:Total and functional parasite specific IgE responses in Plasmodium falciparum-infected patients exhibiting different clinical status	2007	infectious disease	17204149	1781948	10.1186/1475-2875-6-1	Molecular aspects of severe malaria
The Anopheles dirus complex: spatial distribution and environmental drivers	scientific article	en:The Anopheles dirus complex: spatial distribution and environmental drivers	2007	infectious disease	17341297	1838916	10.1186/1475-2875-6-26	Comparative performance of the Mbita trap, CDC light trap and the human landing catch in the sampling of Anopheles arabiensis, An. funestus and culicine species in a rice irrigation in western Kenya
What are you feeling? Using functional magnetic resonance imaging to assess the modulation of sensory and affective responses during empathy for pain	scientific article	en:What are you feeling? Using functional magnetic resonance imaging to assess the modulation of sensory and affective responses during empathy for pain	2007		18091986	2144768	10.1371/journal.pone.0001292	Empathic neural responses are modulated by the perceived fairness of others A default mode of brain function
Two Chikungunya isolates from the outbreak of La Reunion (Indian Ocean) exhibit different patterns of infection in the mosquito, Aedes albopictus	scientific article	en:Two Chikungunya isolates from the outbreak of La Reunion (Indian Ocean) exhibit different patterns of infection in the mosquito, Aedes albopictus	2007	Asian tiger mosquito	18000540	2064959	10.1371/journal.pone.0001168	Genome microevolution of chikungunya viruses causing the Indian Ocean outbreak Re-emergence of Chikungunya and O'nyong-nyong viruses: evidence for distinct geographical lineages and distant evolutionary relationships
Nullomers: really a matter of natural selection?	scientific article	en:Nullomers: really a matter of natural selection?	2007		17925870	1995752	10.1371/journal.pone.0001022	Genome comparison without alignment using shortest unique substrings
Impedance-matching hearing in Paleozoic reptiles: evidence of advanced sensory perception at an early stage of amniote evolution	scientific article	en:Impedance-matching hearing in Paleozoic reptiles: evidence of advanced sensory perception at an early stage of amniote evolution	2007		17849018	1964539	10.1371/journal.pone.0000889	Earliest evidence of cynodont burrowing
Quadrupling muscle mass in mice by targeting TGF-beta signaling pathways	scientific article	en:Quadrupling muscle mass in mice by targeting TGF-beta signaling pathways	2007		17726519	1949143	10.1371/journal.pone.0000789	A mutation in the myostatin gene increases muscle mass and enhances racing performance in heterozygote dogs Regulation of muscle growth by multiple ligands signaling through activin type II receptors Myostatin mutation associated with gross muscle hypertrophy in a child Regulation of myostatin activity and muscle growth Double muscling in cattle due to mutations in the myostatin gene
Marburg virus infection detected in a common African bat	scientific article	en:Marburg virus infection detected in a common African bat	2007		17712412	1942080	10.1371/journal.pone.0000764	Marburgvirus genomics and association with a large hemorrhagic fever outbreak in Angola Multiple Ebola Virus Transmission Events and Rapid Decline of Central African Wildlife Experimental inoculation of plants and animals with Ebola virus
Systematic association mapping identifies NELL1 as a novel IBD disease gene	scientific article	en:Systematic association mapping identifies NELL1 as a novel IBD disease gene	2007		17684544	1933598	10.1371/journal.pone.0000691	Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls Genome-wide association study identifies new susceptibility loci for Crohn disease and implicates autophagy in disease pathogenesis Craniosynostosis in transgenic mice overexpressing Nell-1 A frameshift mutation in NOD2 associated with susceptibility to Crohn's disease Transmission test for linkage disequilibrium: the insulin gene region and insulin-dependent diabetes mellitus (IDDM) Diversity of function is inherent in matricellular proteins: an appraisal of thrombospondin 1 Ulcerative colitis and Crohn's disease in an unselected population of monozygotic and dizygotic twins. A study of heritability and the influence of smoking Assembly and routing of von Willebrand factor variants: the requirements for disulfide-linked dimerization reside within the carboxy-terminal 151 amino acids
Early trauma and increased risk for physical aggression during adulthood: the moderating role of MAOA genotype	scientific article	en:Early trauma and increased risk for physical aggression during adulthood: the moderating role of MAOA genotype	2007		17534436	1872046	10.1371/journal.pone.0000486	Monoamine oxidase: from genes to behavior Abnormal behavior associated with a point mutation in the structural gene for monoamine oxidase A Aggressive behavior and altered amounts of brain serotonin and norepinephrine in mice lacking MAOA
Ionizing radiation changes the electronic properties of melanin and enhances the growth of melanized fungi	scientific article	en:Ionizing radiation changes the electronic properties of melanin and enhances the growth of melanized fungi	2007		17520016	1866175	10.1371/journal.pone.0000457	An obligately photosynthetic bacterial anaerobe from a deep-sea hydrothermal vent
Coevolution of male and female genital morphology in waterfowl	scientific article	en:Coevolution of male and female genital morphology in waterfowl	2007		17476339	1855079	10.1371/journal.pone.0000418	Shooting darts: co-evolution and counter-adaptation in hermaphroditic snails
Full-length sequencing and genomic characterization of Bagaza, Kedougou, and Zika viruses	scientific article	en:Full-length sequencing and genomic characterization of Bagaza, Kedougou, and Zika viruses	2007	Zika virus Zika fever	17195954		10.1007/s00705-006-0903-z	Long-range RNA-RNA interactions circularize the dengue virus genome The CLUSTAL X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
Differences in estimates of size distribution of beryllium powder materials using phase contrast microscopy, scanning electron microscopy, and liquid suspension counter techniques	scientific article	en:Differences in estimates of size distribution of beryllium powder materials using phase contrast microscopy, scanning electron microscopy, and liquid suspension counter techniques	2007		17328812	1810321	10.1186/1743-8977-4-3	Principles for characterizing the potential human health effects from exposure to nanomaterials: elements of a screening strategy
SISYPHUS--structural alignments for proteins with non-trivial relationships	scientific article	en:SISYPHUS--structural alignments for proteins with non-trivial relationships	2007-01		17068077	1635320	10.1093/nar/gkl746	The Universal Protein Resource (UniProt) The distributed annotation system The Protein Data Bank Gapped BLAST and PSI-BLAST: a new generation of protein database search programs 3D domain swapping: a mechanism for oligomer assembly
Polybrominated diphenyl ether levels in the blood of pregnant women living in an agricultural community in California	scientific article	en:Polybrominated diphenyl ether levels in the blood of pregnant women living in an agricultural community in California	2007-01		17366822	1797836	10.1289/ehp.8899	Body burdens of polybrominated diphenyl ethers among urban anglers Brominated flame retardants: cause for concern? Polybrominated diphenyl ethers (PBDEs) in U.S. mothers' milk Human prenatal and postnatal exposure to polybrominated diphenyl ethers, polychlorinated biphenyls, polychlorobiphenylols, and pentachlorophenol High body burdens of 2,2',4,4'-tetrabromodiphenyl ether (BDE-47) in California women Brominated flame retardants: a novel class of developmental neurotoxicants in our environment? Polybrominated diphenyl ethers: occurrence, dietary exposure, and toxicology
Early history of mammals is elucidated with the ENCODE multiple species sequencing data	scientific article	en:Early history of mammals is elucidated with the ENCODE multiple species sequencing data	2007-01-05		17206863	1761045	10.1371/journal.pgen.0030002	Retroposed elements as archives for the evolutionary history of placental mammals Influence of Tertiary paleoenvironmental changes on the diversification of South American mammals: a relaxed molecular clock study within xenarthrans Likelihood-mapping: a simple method to visualize phylogenetic content of a sequence alignment
The Sorcerer II Global Ocean Sampling expedition: expanding the universe of protein families	scientific article	en:The Sorcerer II Global Ocean Sampling expedition: expanding the universe of protein families	2007-03		17355171	1821046	10.1371/journal.pbio.0050016	The Sorcerer II Global Ocean Sampling expedition: northwest Atlantic through eastern tropical Pacific Structural and functional diversity of the microbial kinome Evidence of a large novel gene pool associated with prokaryotic genomic islands Three Prochlorococcus cyanophage genomes: signature features and ecological interpretations STRING: known and predicted protein-protein associations, integrated and transferred across organisms The ProDom database of protein domain families: more emphasis on 3D InterPro, progress and status in 2005 Transfer of photosynthesis genes to and from Prochlorococcus viruses Prolinks: a database of protein functional linkages derived from coevolution MUSCLE: multiple sequence alignment with high accuracy and high throughput The Pfam protein families database UniProt: the Universal Protein knowledgebase Inference of protein function and protein linkages in Mycobacterium tuberculosis based on prokaryotic genome organization: a combined computational approach Myriads of protein families, and still counting Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JEvTrace: refinement and variations of the evolutionary trace in JAVA The TIGRFAMs database of protein families The EMBL Nucleotide Sequence Database: major new developments Genomic analysis of uncultured marine viral communities Genome sequence of Oceanobacillus iheyensis isolated from the Iheya Ridge and its unexpected adaptive capabilities to extreme environments The complete genome sequence of Chlorobium tepidum TLS, a photosynthetic, anaerobic, green-sulfur bacterium Ptc1, a type 2C Ser/Thr phosphatase, inactivates the HOG pathway by dephosphorylating the mitogen-activated protein kinase Hog1 Gene ontology: tool for the unification of biology. The Gene Ontology Consortium Protein phosphatase 2Calpha inhibits the human stress-responsive p38 and JNK MAPK pathways Gapped BLAST and PSI-BLAST: a new generation of protein database search programs Crystal structure of the protein serine/threonine phosphatase 2C at 2.0 A resolution Evolution of the glutamine synthetase gene, one of the oldest existing and functioning genes CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice Amino acid substitution matrices from protein blocks
Revisiting the basic reproductive number for malaria and its implications for malaria control	scientific article	en:Revisiting the basic reproductive number for malaria and its implications for malaria control	2007-03	malaria	17311470	1802755	10.1371/journal.pbio.0050042	The malaria Atlas Project: developing global maps of malaria risk Effect of artemether-lumefantrine policy and improved vector control on malaria burden in KwaZulu-Natal, South Africa The unexpected importance of mosquito oviposition behaviour for malaria: non-productive larval habitats can be sources for malaria transmission Reduction of malaria transmission to Anopheles mosquitoes with a six-dose regimen of co-artemether The global distribution of clinical episodes of Plasmodium falciparum malaria The risk of a mosquito-borne infection in a heterogeneous environment Statics and dynamics of malaria infection in Anopheles mosquitoes Host-specific cues cause differential attractiveness of Kenyan men to the African malaria vector Anopheles gambiae
Absence of Ret signaling in mice causes progressive and late degeneration of the nigrostriatal system	scientific article	en:Absence of Ret signaling in mice causes progressive and late degeneration of the nigrostriatal system	2007-03		17298183	1808500	10.1371/journal.pbio.0050039	Misfolded proteinase K-resistant hyperphosphorylated alpha-synuclein in aged transgenic mice with locomotor deterioration and in human alpha-synucleinopathies
Cumulative lead dose and cognitive function in adults: a review of studies that measured both blood lead and bone lead	scientific article	en:Cumulative lead dose and cognitive function in adults: a review of studies that measured both blood lead and bone lead	2007-03		17431502	1849945	10.1289/ehp.9786	Recommendations for medical management of adult lead exposure The epidemiology of lead toxicity in adults: measuring dose and consideration of other methodologic issues Environmental lead exposure and cognitive function in community-dwelling older adults Past adult lead exposure is linked to neurodegeneration measured by brain MRI Confounding of the Relation between Homocysteine and Peripheral Arterial Disease by Lead, Cadmium, and Renal Function Association of Blood Lead and Tibia Lead with Blood Pressure and Hypertension in a Community Sample of Older Adults Blood lead is a predictor of homocysteine levels in a population-based study of older adults ApoE genotype, past adult lead exposure, and neurobehavioral function Characterization of toxicokinetics and toxicodynamics with linear systems theory: application to lead-associated cognitive decline
Recommendations for medical management of adult lead exposure	scientific article	en:Recommendations for medical management of adult lead exposure	2007-03		17431500	1849937	10.1289/ehp.9784	Cumulative lead dose and cognitive function in adults: a review of studies that measured both blood lead and bone lead Lead exposure and cardiovascular disease--a systematic review The epidemiology of lead toxicity in adults: measuring dose and consideration of other methodologic issues Adult lead exposure: time for change Environmental lead exposure and cognitive function in community-dwelling older adults Tubular and glomerular kidney effects in Swedish women with low environmental cadmium exposure Effect of breast milk lead on infant blood lead levels at 1 month of age Lead, diabetes, hypertension, and renal function: the normative aging study Levels of lead in breast milk and their relation to maternal blood and bone lead levels at one month postpartum A delta-aminolevulinic acid dehydratase (ALAD) polymorphism may modify the relationship of low-level lead exposure to uricemia and renal function: the normative aging study Maternal bone lead as an independent risk factor for fetal neurotoxicity: a prospective study Interrelations of lead levels in bone, venous blood, and umbilical cord blood with exogenous lead exposure through maternal plasma lead in peripartum women
The epidemiology of lead toxicity in adults: measuring dose and consideration of other methodologic issues	scientific article	en:The epidemiology of lead toxicity in adults: measuring dose and consideration of other methodologic issues	2007-03		17431499	1849918	10.1289/ehp.9783	Cumulative lead dose and cognitive function in adults: a review of studies that measured both blood lead and bone lead Lead exposure and cardiovascular disease--a systematic review Environmental lead exposure and cognitive function in community-dwelling older adults Association of Blood Lead and Tibia Lead with Blood Pressure and Hypertension in a Community Sample of Older Adults Blood lead is a predictor of homocysteine levels in a population-based study of older adults Determinants of bone and blood lead levels among minorities living in the Boston area Hair analysis: exploring the state of the science The relationship between lead in plasma and whole blood in women Influence of bone resorption on the mobilization of lead from bone among middle-aged and elderly men: the Normative Aging Study Smoking, drinking, and other life style factors and cognitive function in men in the Caerphilly cohort Provocative chelation with DMSA and EDTA: evidence for differential access to lead storage sites
Skin exposure to isocyanates: reasons for concern	scientific article	en:Skin exposure to isocyanates: reasons for concern	2007-03		17431479	1849909	10.1289/ehp.9557	Enhanced preventive programme at a beryllium oxide ceramics facility reduces beryllium sensitisation among new workers Determinants of Isocyanate Exposures in Auto Body Repair and Refinishing Shops Skin as a route of exposure and sensitization in chronic beryllium disease
Survey sequencing and comparative analysis of the elephant shark (Callorhinchus milii) genome	scientific article	en:Survey sequencing and comparative analysis of the elephant shark (Callorhinchus milii) genome	2007-04		17407382	1845163	10.1371/journal.pbio.0050101	Human-zebrafish non-coding conserved elements act in vivo to regulate transcription Highly conserved non-coding sequences are associated with vertebrate development A gene family required for human germ cell development evolved from an ancient meiotic gene conserved in metazoans Identification of a novel Sry-related gene and its germ cell-specific expression Identification of a human homologue of the sea urchin receptor for egg jelly: a polycystic kidney disease-like protein Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
Why most published research findings are false: problems in the analysis		en:Why most published research findings are false: problems in the analysis	2007-04		17456002	1855693	10.1371/journal.pmed.0040168	Why most published research findings are false
Case report: potential arsenic toxicosis secondary to herbal kelp supplement	scientific article	en:Case report: potential arsenic toxicosis secondary to herbal kelp supplement	2007-04		17450231	1852683	10.1289/ehp.9495	Arsenic: in search of an antidote to a global poison
Response to malaria epidemics in Africa	scientific article	en:Response to malaria epidemics in Africa	2007-05	infectious disease	17553244	2738452	10.3201/eid1305.061333	An online operational rainfall-monitoring resource for epidemic malaria early warning systems in Africa Field assessments in western Kenya link malaria vectors to environmentally disturbed habitats during the dry season Coupling between annual and ENSO timescales in the malaria-climate association in Colombia
Hyperoxic brain effects are normalized by addition of CO2	scientific article	en:Hyperoxic brain effects are normalized by addition of CO2	2007-05		17518514	1872042	10.1371/journal.pmed.0040173	THE EFFECTS OF ALTERED ARTERIAL TENSIONS OF CARBON DIOXIDE AND OXYGEN ON CEREBRAL BLOOD FLOW AND CEREBRAL OXYGEN CONSUMPTION OF NORMAL YOUNG MEN
The validation of work-related self-reported asthma exacerbation	scientific article	en:The validation of work-related self-reported asthma exacerbation	2007-05		17182641	2092554	10.1136/oem.2006.028662	The frequency of workplace exacerbation among health maintenance organisation members with asthma
Spatial, temporal, and species variation in prevalence of influenza A viruses in wild migratory birds	scientific article	en:Spatial, temporal, and species variation in prevalence of influenza A viruses in wild migratory birds	2007-05-11		17500589	1876497	10.1371/journal.ppat.0030061	Characterization of a novel influenza A virus hemagglutinin subtype (H16) obtained from black-headed gulls GenBank Avian influenza A virus (H7N7) associated with human conjunctivitis and a fatal case of acute respiratory distress syndrome Development of a real-time reverse transcriptase PCR assay for type A influenza virus and the avian H5 and H7 hemagglutinin subtypes Evolution and ecology of influenza A viruses
A mutation in the myostatin gene increases muscle mass and enhances racing performance in heterozygote dogs	scientific article	en:A mutation in the myostatin gene increases muscle mass and enhances racing performance in heterozygote dogs	2007-05-25		17530926	1877876	10.1371/journal.pgen.0030079	Myostatin mutation associated with gross muscle hypertrophy in a child Inference of population structure using multilocus genotype data Double muscling in cattle due to mutations in the myostatin gene
Plasmodium malariae and Plasmodium ovale--the "bashful" malaria parasites	scientific article	en:Plasmodium malariae and Plasmodium ovale--the "bashful" malaria parasites	2007-06	infectious disease	17459775	3728836	10.1016/j.pt.2007.04.009	Plasmodium species mixed infections in two areas of Manhiça district, Mozambique An analysis of the geographical distribution of Plasmodium ovale
The Genographic Project public participation mitochondrial DNA database	scientific article	en:The Genographic Project public participation mitochondrial DNA database	2007-06		17604454	1904368	10.1371/journal.pgen.0030104	The matrilineal ancestry of Ashkenazi Jewry: portrait of a recent founder event The role of selection in the evolution of human mitochondrial genomes High-resolution mtDNA evidence for the late-glacial resettlement of Europe from an Iberian refugium Phylogeny of mitochondrial DNA macrohaplogroup N in India, based on complete sequencing: implications for the peopling of South Asia Ethiopian mitochondrial DNA heritage: tracking gene flow across and around the gate of tears The molecular dissection of mtDNA haplogroup H confirms that the Franco-Cantabrian glacial refuge was a major source for the European gene pool Where west meets east: the complex mtDNA landscape of the southwest and Central Asian corridor Founding mothers of Jewish communities: geographically separated Jewish groups were independently founded by very few female ancestors Reduced-median-network analysis of complete mitochondrial DNA coding-region sequences for the major African, Asian, and European haplogroups A nomenclature system for the tree of human Y-chromosomal binary haplogroups Origins and divergence of the Roma (gypsies) Tracing European founder lineages in the Near Eastern mtDNA pool Asian affinities and continental radiation of the four founding Native American mtDNAs
From morphology to neural information: the electric sense of the skate	scientific article	en:From morphology to neural information: the electric sense of the skate	2007-06		17571918	1892606	10.1371/journal.pcbi.0030113	Sharks can detect changes in the geomagnetic field
Why most published research findings are false: author's reply to Goodman and Greenland	scientific article	en:Why most published research findings are false: author's reply to Goodman and Greenland	2007-06		17593900	1896210	10.1371/journal.pmed.0040215	Why most published research findings are false: problems in the analysis Why most published research findings are false
Linking public health, housing, and indoor environmental policy: successes and challenges at local and federal agencies in the United States	scientific article	en:Linking public health, housing, and indoor environmental policy: successes and challenges at local and federal agencies in the United States	2007-06		17589610	1892139	10.1289/ehp.8990	The relationship between housing and health: children at risk The prevalence of lead-based paint hazards in U.S. housing Economic gains resulting from the reduction in children's exposure to lead in the United States
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project	scientific article	en:Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project	2007-06-14		17571346	2212820	10.1038/nature05874	Structured RNAs in the ENCODE selected regions of the human genome Pseudogenes in the ENCODE regions: consensus annotation, analysis of transcription, and evolution Prominent use of distal 5' transcription start sites and discovery of a large number of additional exons in ENCODE regions The DART classification of unannotated transcription within the ENCODE regions: associating transcription with known and novel loci The landscape of histone modifications across 1% of the human genome in five human cell lines FAIRE (Formaldehyde-Assisted Isolation of Regulatory Elements) isolates active regulatory elements from human chromatin GENCODE: producing a reference annotation for ENCODE EGASP: the human ENCODE Genome Annotation Assessment Project DNase-chip: a high-resolution method to identify DNase I hypersensitive sites using tiled microarrays Genome-wide associations of gene expression variation in humans Tandem chimerism as a means to increase protein complexity in the human genome A haplotype map of the human genome Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes Examples of the complex architecture of the human transcriptome revealed by RACE and high-density tiling arrays Transcribed processed pseudogenes in the human genome: an intermediate form of expressed retrosequence lacking protein-coding ability Functional evolution of a cis-regulatory module A model of the statistical power of comparative genome sequence analysis Highly conserved non-coding sequences are associated with vertebrate development A global transcriptional regulatory role for c-Myc in Burkitt's lymphoma cells Quantitative estimates of sequence divergence for comparative analyses of mammalian genomes Genomic targets of the human c-Myc protein Initial sequencing and analysis of the human genome Cloning and expression of human TAFII250: a TBP-associated factor implicated in cell-cycle regulation A test of neutral molecular evolution based on nucleotide data
Vitamin E deficiency enhances pulmonary inflammatory response and oxidative stress induced by single-walled carbon nanotubes in C57BL/6 mice	scientific article	en:Vitamin E deficiency enhances pulmonary inflammatory response and oxidative stress induced by single-walled carbon nanotubes in C57BL/6 mice	2007-06-15		17482224	2266092	10.1016/j.taap.2007.03.018	Unusual inflammatory and fibrogenic pulmonary responses to single-walled carbon nanotubes in mice
Development of the human infant intestinal microbiota	scientific article	en:Development of the human infant intestinal microbiota	2007-07		17594176	1896187	10.1371/journal.pbio.0050177	An African origin for the intimate association between humans and Helicobacter pylori A humanized gnotobiotic mouse model of host-archaeal-bacterial mutualism Obesity alters gut microbial ecology Diversity of the human intestinal microbial flora Methanogenic Archaea and human periodontal disease The Ribosomal Database Project (RDP-II): previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy Molecular monitoring of succession of bacterial communities in human neonates Rapid determination of 16S ribosomal RNA sequences for phylogenetic analyses Archaea in coastal marine environments
HIV denial in the Internet era	scientific article	en:HIV denial in the Internet era	2007-08	HIV	17713982	1949841	10.1371/journal.pmed.0040256	Mbeki appoints team to look at cause of AIDS Human immunodeficiency virus and acquired immunodeficiency syndrome: correlation but not causation
Scientific citations in Wikipedia	scientific article	en:Scientific citations in Wikipedia	2007-08	Wikipedia Scientific citation Scientometrics			10.5210/fm.v12i8.1997	Internet encyclopaedias go head to head
A Shope Fibroma virus PYRIN-only protein modulates the host immune response	scientific article	en:A Shope Fibroma virus PYRIN-only protein modulates the host immune response	2007-08-04		17676277	4257706	10.1007/s11262-007-0141-9	ASC directs NF-kappaB activation by regulating receptor interacting protein-2 (RIP2) caspase-1 interactions IL-33, an interleukin-1-like cytokine that signals via the IL-1 receptor-related protein ST2 and induces T helper type 2-associated cytokines CATERPILLER: a novel gene family important in immunity, cell death, and diseases Cryopyrin-induced interleukin 1beta secretion in monocytic cells: enhanced activity of disease-associated mutants and requirement for ASC The PAAD/PYRIN-only protein POP1/ASC2 is a modulator of ASC-mediated nuclear-factor-kappa B and pro-caspase-1 regulation The PAAD/PYRIN-family protein ASC is a dual regulator of a conserved step in nuclear factor kappaB activation pathways The inflammasome: a molecular platform triggering activation of inflammatory caspases and processing of proIL-beta PYPAF7, a novel PYRIN-containing Apaf1-like protein that regulates activation of NF-kappa B and caspase-1-dependent cytokine processing PYPAF1, a PYRIN-containing Apaf1-like protein that assembles with ASC and regulates activation of NF-kappa B Hostile takeovers: viral appropriation of the NF-kappaB pathway ICEBERG: a novel inhibitor of interleukin-1beta generation ASC, a novel 22-kDa protein, aggregates during apoptosis of human promyelocytic leukemia HL-60 cells PED/PEA-15: an anti-apoptotic molecule that regulates FAS/TNFR1-induced apoptosis
The diploid genome sequence of an individual human	scientific article	en:The diploid genome sequence of an individual human	2007-09-04		17803354	1964779	10.1371/journal.pbio.0050254	The Sorcerer II Global Ocean Sampling expedition: northwest Atlantic through eastern tropical Pacific Global variation in copy number in the human genome A haplotype map of the human genome Genome sequencing in microfabricated high-density picolitre reactors Complement factor H polymorphism in age-related macular degeneration The microRNA Registry Genome-wide detection of segmental duplications and potential assembly errors in the human genome sequence Human chromosome 7: DNA sequence and biology Noncoding RNA gene detection using comparative sequence analysis Initial sequencing and analysis of the human genome Molecular characterization of the human peroxisomal branched-chain acyl-CoA oxidase: cDNA cloning, chromosomal assignment, tissue distribution, and evidence for the absence of the protein in Zellweger syndrome DNA sequencing with chain-terminating inhibitors
Inconsistencies in Neanderthal genomic DNA sequences	scientific article	en:Inconsistencies in Neanderthal genomic DNA sequences	2007-10		17937503	2014787	10.1371/journal.pgen.0030175	Sequencing and analysis of Neanderthal genomic DNA A haplotype map of the human genome No evidence of Neandertal mtDNA contribution to early modern humans
Healthcare provider smoking cessation advice among US worker groups	scientific article	en:Healthcare provider smoking cessation advice among US worker groups	2007-10		17897991	2598555	10.1136/tc.2006.019117	Obesity in US workers: The National Health Interview Survey, 1986 to 2002
A single mutation in the PB1-F2 of H5N1 (HK/97) and 1918 influenza A viruses contributes to increased virulence	scientific article	en:A single mutation in the PB1-F2 of H5N1 (HK/97) and 1918 influenza A viruses contributes to increased virulence	2007-10-05		17922571	2000966	10.1371/journal.ppat.0030141	Influenza virus PB1-F2 protein induces cell death through mitochondrial ANT3 and VDAC1 PB1-F2, an influenza A virus-encoded proapoptotic mitochondrial protein, creates variably sized pores in planar lipid membranes
The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration	scientific article	en:The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration	2007-11	bioengineering biomedical engineering	17989687	2814061	10.1038/nbt1346	Relations in biomedical ontologies Facts from text--is text mining ready to deliver? An ontology for cell types Building national electronic medical record systems via the World Wide Web
Allelic heterogeneity at the equine KIT locus in dominant white (W) horses	scientific article	en:Allelic heterogeneity at the equine KIT locus in dominant white (W) horses	2007-11		17997609	2065884	10.1371/journal.pgen.0030195	Signaling by Kit protein-tyrosine kinase--the stem cell factor receptor Activation of the human c-kit product by ligand-induced dimerization mediates circular actin reorganization and chemotaxis Mutation of the KIT (mast/stem cell growth factor receptor) protooncogene in human piebaldism
The foxa2 gene controls the birth and spontaneous degeneration of dopamine neurons in old age	scientific article	en:The foxa2 gene controls the birth and spontaneous degeneration of dopamine neurons in old age	2007-12		18076286	2121110	10.1371/journal.pbio.0050325	Hereditary early-onset Parkinson's disease caused by mutations in PINK1 Stress-dependent regulation of FOXO transcription factors by the SIRT1 deacetylase Mutations in the DJ-1 gene associated with autosomal recessive early-onset parkinsonism Akt promotes cell survival by phosphorylating and inhibiting a Forkhead transcription factor Mutations in the parkin gene cause autosomal recessive juvenile parkinsonism
Working without a blindfold: the critical role of diagnostics in malaria control	Scientific Article about Malaria from Malaria Journal	en:Working without a blindfold: the critical role of diagnostics in malaria control	2008	infectious disease	19091039	2604880	10.1186/1475-2875-7-S1-S5	Rapid urban malaria appraisal (RUMA) I: epidemiology of urban malaria in Ouagadougou Antimalarial drug resistance
From sea to land and beyond--new insights into the evolution of euthyneuran Gastropoda (Mollusca)	scientific article	en:From sea to land and beyond--new insights into the evolution of euthyneuran Gastropoda (Mollusca)	2008		18294406	2287175	10.1186/1471-2148-8-57	Q24555823
Bionomics of Anopheles latens in Kapit, Sarawak, Malaysian Borneo in relation to the transmission of zoonotic simian malaria parasite Plasmodium knowlesi	scientific article	en:Bionomics of Anopheles latens in Kapit, Sarawak, Malaysian Borneo in relation to the transmission of zoonotic simian malaria parasite Plasmodium knowlesi	2008	infectious disease	18377652	2292735	10.1186/1475-2875-7-52	Plasmodium knowlesi malaria in humans is widely distributed and potentially life threatening Naturally acquired Plasmodium knowlesi malaria in human, Thailand IDENTIFICATION OF ANOPHELES BALABACENSIS INTROLATUS AS A VECTOR OF MONKEY MALARIA IN MALAYA
Costs and consequences of large-scale vector control for malaria	scientific article	en:Costs and consequences of large-scale vector control for malaria	2008	infectious disease	19091114	2625363	10.1186/1475-2875-7-258	Creating an "enabling environment" for taking insecticide treated nets to national scale: the Tanzanian experience The costs and effects of a nationwide insecticide-treated net programme: the case of Malawi Evaluation of Olyset insecticide-treated nets distributed seven years previously in Tanzania
Assessment of the pharmacokinetics and dynamics of two combination regimens of fosmidomycin-clindamycin in patients with acute uncomplicated falciparum malaria	scientific article	en:Assessment of the pharmacokinetics and dynamics of two combination regimens of fosmidomycin-clindamycin in patients with acute uncomplicated falciparum malaria	2008	infectious disease	18973702	2600645	10.1186/1475-2875-7-225	Fosmidomycin plus clindamycin for treatment of pediatric patients aged 1 to 14 years with Plasmodium falciparum malaria
Cytokine-associated neutrophil extracellular traps and antinuclear antibodies in Plasmodium falciparum infected children under six years of age	scientific article	en:Cytokine-associated neutrophil extracellular traps and antinuclear antibodies in Plasmodium falciparum infected children under six years of age	2008	infectious disease	18312656	2275287	10.1186/1475-2875-7-41	The relation of immunoglobulin class, pattern of anti-nuclear antibody, and complement-fixing antibodies to DNA in sera from patients with systemic lupus erythematosus
Mutations in the Plasmodium falciparum cytochrome b gene are associated with delayed parasite recrudescence in malaria patients treated with atovaquone-proguanil	scientific article	en:Mutations in the Plasmodium falciparum cytochrome b gene are associated with delayed parasite recrudescence in malaria patients treated with atovaquone-proguanil	2008	infectious disease	19021900	2640403	10.1186/1475-2875-7-240	Malarone treatment failure not associated with previously described mutations in the cytochrome b gene Different mutation patterns of atovaquone resistance to Plasmodium falciparum in vitro and in vivo: rapid detection of codon 268 polymorphisms in the cytochrome b as potential in vivo resistance marker Malarone treatment failure and in vitro confirmation of resistance of Plasmodium falciparum isolate from Lagos, Nigeria
Multiplicity of Plasmodium falciparum infection in asymptomatic children in Senegal: relation to transmission, age and erythrocyte variants	scientific article	en:Multiplicity of Plasmodium falciparum infection in asymptomatic children in Senegal: relation to transmission, age and erythrocyte variants	2008	infectious disease	18215251	2267475	10.1186/1475-2875-7-17	The effect of alpha+-thalassaemia on the incidence of malaria and other diseases in children living on the coast of Kenya
CPSARST: an efficient circular permutation search tool applied to the detection of novel protein structural relationships	scientific article	en:CPSARST: an efficient circular permutation search tool applied to the detection of novel protein structural relationships	2008		18201387	2395249	10.1186/gb-2008-9-1-r11	Sequence permutations in the molecular evolution of DNA methyltransferases Circularly permuted proteins in the protein structure database The Protein Data Bank Molecular basis of glutathione synthetase deficiency and a rare gene permutation event Gapped BLAST and PSI-BLAST: a new generation of protein database search programs CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice Amino acid substitution matrices from protein blocks
Capnocytophaga canimorsus: a human pathogen feeding at the surface of epithelial cells and phagocytes	scientific article	en:Capnocytophaga canimorsus: a human pathogen feeding at the surface of epithelial cells and phagocytes	2008		18818736	2533406	10.1371/journal.ppat.1000164	Capnocytophaga canimorsus mycotic abdominal aortic aneurysm: why the mailman is afraid of dogs InterProScan: protein domains identifier Diversity of microbial sialic acid metabolism Capnocytophaga canimorsus sp. nov. (formerly CDC group DF-2), a cause of septicemia following dog bite, and C. cynodegmi sp. nov., a cause of localized wound infection following dog bite
Sensitive detection of colorectal cancer in peripheral blood by septin 9 DNA methylation assay	scientific article	en:Sensitive detection of colorectal cancer in peripheral blood by septin 9 DNA methylation assay	2008		19018278	2582436	10.1371/journal.pone.0003759	MSF (MLL septin-like fusion), a fusion partner gene of MLL, in a therapy-related acute myeloid leukemia with a t(11;17)(q23;q25)
Historical mammal extinction on Christmas Island (Indian Ocean) correlates with introduced infectious disease	scientific article	en:Historical mammal extinction on Christmas Island (Indian Ocean) correlates with introduced infectious disease	2008		18985148	2572834	10.1371/journal.pone.0003602	Phylogeny and biogeography of African Murinae based on mitochondrial and nuclear gene sequences, with a new tribal classification of the subfamily Ancient DNA MAFFT version 5: improvement in accuracy of multiple sequence alignment
Evidence for avian intrathoracic air sacs in a new predatory dinosaur from Argentina	scientific article	en:Evidence for avian intrathoracic air sacs in a new predatory dinosaur from Argentina	2008		18825273	2553519	10.1371/journal.pone.0003303	Avian-like breathing mechanics in maniraptoran dinosaurs Extreme convergence in the body plans of an early suchian (Archosauria) and ornithomimid dinosaurs (Theropoda) New dinosaurs link southern landmasses in the Mid-Cretaceous
Species specificity in major urinary proteins by parallel evolution	scientific article	en:Species specificity in major urinary proteins by parallel evolution	2008		18815613	2533699	10.1371/journal.pone.0003280	Dynamic instability of the major urinary protein gene family revealed by genomic and phenotypic comparisons between C57 and 129 strain mice The genetic basis of inbreeding avoidance in house mice Ensembl 2007 Diverse spatial, temporal, and sexual expression of recently duplicated androgen-binding protein genes in Mus musculus Structural and functional differences in isoforms of mouse major urinary proteins: a male-specific protein that preferentially binds a male pheromone GeneWise and Genomewise Cloning, post-translational modifications, heterologous expression and ligand-binding of boar salivary lipocalin The lipocalin protein family: structure and function Molecular heterogeneity in the Major Urinary Proteins of the house mouse Mus musculus Acceleration of puberty onset in female mice by male urinary proteins Two main groups of mouse major urinary protein genes, both largely located on chromosome 4 Expression of six mouse major urinary protein genes in the mammary, parotid, sublingual, submaxillary, and lachrymal glands and in the liver
Lifelong reduction of LDL-cholesterol related to a common variant in the LDL-receptor gene decreases the risk of coronary artery disease--a Mendelian Randomisation study	scientific article	en:Lifelong reduction of LDL-cholesterol related to a common variant in the LDL-receptor gene decreases the risk of coronary artery disease--a Mendelian Randomisation study	2008		18714375	2500189	10.1371/journal.pone.0002986	Six new loci associated with blood low-density lipoprotein cholesterol, high-density lipoprotein cholesterol or triglycerides in humans Genome-wide association study identifies genes for biomarkers of cardiovascular disease: serum urate and dyslipidemia A second generation human haplotype map of over 3.1 million SNPs Genomewide association analysis of coronary artery disease
A 28,000 years old Cro-Magnon mtDNA sequence differs from all potentially contaminating modern sequences	scientific article	en:A 28,000 years old Cro-Magnon mtDNA sequence differs from all potentially contaminating modern sequences	2008		18628960	2444030	10.1371/journal.pone.0002700	The effect of ancient population bottlenecks on human phenotypic variation A geographically explicit genetic model of worldwide human-settlement history Support from the relationship of genetic and geographic distance in human populations for a serial founder effect originating in Africa Modern humans did not admix with Neanderthals during their range expansion into Europe No evidence of Neandertal mtDNA contribution to early modern humans Evidence for a genetic discontinuity between Neandertals and 24,000-year-old anatomically modern Europeans The retrieval of ancient human DNA sequences
A reappraisal of azhdarchid pterosaur functional morphology and paleoecology	scientific article	en:A reappraisal of azhdarchid pterosaur functional morphology and paleoecology	2008		18509539	2386974	10.1371/journal.pone.0002271	Did pterosaurs feed by skimming? Physical modelling and anatomical evaluation of an unusual feeding method High lift function of the pteroid bone and forewing of pterosaurs
Systematic identification of mRNAs recruited to argonaute 2 by specific microRNAs and corresponding changes in transcript abundance	scientific article	en:Systematic identification of mRNAs recruited to argonaute 2 by specific microRNAs and corresponding changes in transcript abundance	2008		18461144	2330160	10.1371/journal.pone.0002126	MicroRNA targeting specificity in mammals: determinants beyond seed pairing Transcripts targeted by the microRNA-16 family cooperatively regulate cell cycle progression mRNA degradation by miRNAs and GW182 requires both CCR4:NOT deadenylase and DCP1:DCP2 decapping complexes Micro-RNA regulation of the mammalian lin-28 gene during neuronal differentiation of embryonal carcinoma cells Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles TRBP recruits the Dicer complex to Ago2 for microRNA processing and gene silencing Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals Principles of microRNA-target recognition Human MicroRNA targets Human Argonaute2 mediates RNA cleavage targeted by miRNAs and siRNAs Distinct roles for Argonaute proteins in small RNA-directed RNA cleavage pathways MicroRNA targets in Drosophila Identifying biological themes within lists of genes with EASE Significance analysis of microarrays applied to the ionizing radiation response Cluster analysis and display of genome-wide expression patterns
Multigene phylogeny of choanozoa and the origin of animals	scientific article	en:Multigene phylogeny of choanozoa and the origin of animals	2008		18461162	2346548	10.1371/journal.pone.0002098	The genome of the choanoflagellate Monosiga brevicollis and the origin of metazoans An unusual choanoflagellate protein released by Hedgehog autocatalytic processing MAFFT version 5: improvement in accuracy of multiple sequence alignment
Tool-use training in a species of rodent: the emergence of an optimal motor strategy and functional understanding	scientific article	en:Tool-use training in a species of rodent: the emergence of an optimal motor strategy and functional understanding	2008		18365015	2268009	10.1371/journal.pone.0001860	Cognitive ornithology: the evolution of avian intelligence
Small-bodied humans from Palau, Micronesia	scientific article	en:Small-bodied humans from Palau, Micronesia	2008		18347737	2268239	10.1371/journal.pone.0001780	Pygmoid Australomelanesian Homo sapiens skeletal remains from Liang Bua, Flores: population affinities and pathological abnormalities
SOD1 and amyotrophic lateral sclerosis: mutations and oligomerization	scientific article	en:SOD1 and amyotrophic lateral sclerosis: mutations and oligomerization	2008		18301754	2250751	10.1371/journal.pone.0001677	Misfolded CuZnSOD and amyotrophic lateral sclerosis
The citius end: world records progression announces the completion of a brief ultra-physiological quest	scientific article	en:The citius end: world records progression announces the completion of a brief ultra-physiological quest	2008		18253499	2212132	10.1371/journal.pone.0001552	Current anti-doping policy: a critical appraisal
Impact of environment and social gradient on Leptospira infection in urban slums	scientific article	en:Impact of environment and social gradient on Leptospira infection in urban slums	2008	infectious disease	18431445	2292260	10.1371/journal.pntd.0000228	Household transmission of leptospira infection in urban slum communities Determining risk for severe leptospirosis by molecular analysis of environmental surface waters for pathogenic Leptospira Alternatives for logistic regression in cross-sectional studies: an empirical comparison of models that directly estimate the prevalence ratio Leptospirosis
Loop-mediated isothermal amplification (LAMP) method for rapid detection of Trypanosoma brucei rhodesiense	scientific article	en:Loop-mediated isothermal amplification (LAMP) method for rapid detection of Trypanosoma brucei rhodesiense	2008	infectious disease	18253475	2238707	10.1371/journal.pntd.0000147	Loop-mediated isothermal amplification of DNA
Sex-biased evolutionary forces shape genomic patterns of human diversity	scientific article	en:Sex-biased evolutionary forces shape genomic patterns of human diversity	2008		18818765	2538571	10.1371/journal.pgen.1000202	A nomenclature system for the tree of human Y-chromosomal binary haplogroups Estimate of the mutation rate per nucleotide in humans
Selective inflammatory pain insensitivity in the African naked mole-rat (Heterocephalus glaber)	scientific article	en:Selective inflammatory pain insensitivity in the African naked mole-rat (Heterocephalus glaber)	2008-01		18232734	2214810	10.1371/journal.pbio.0060013	Do fishes have nociceptors? Evidence for the evolution of a vertebrate sensory system
The cost of pushing pills: a new estimate of pharmaceutical promotion expenditures in the United States	scientific article	en:The cost of pushing pills: a new estimate of pharmaceutical promotion expenditures in the United States	2008-01-03		18177202	2174966	10.1371/journal.pmed.0050001	Ghost authorship in industry-initiated randomised trials
Identification of the yellow skin gene reveals a hybrid origin of the domestic chicken	scientific article	en:Identification of the yellow skin gene reveals a hybrid origin of the domestic chicken	2008-02		18454198	2265484	10.1371/journal.pgen.1000010	A genetic variation map for chicken with 2.8 million single-nucleotide polymorphisms Biodiversity of 52 chicken populations assessed by microsatellite typing of DNA pools Identification and characterization of a mammalian enzyme catalyzing the asymmetric oxidative cleavage of provitamin A Monophyletic origin and unique dispersal patterns of domestic fowls
Multiple reassortment events in the evolutionary history of H1N1 influenza A virus since 1918	scientific article	en:Multiple reassortment events in the evolutionary history of H1N1 influenza A virus since 1918	2008-02-15		18463694	2262849	10.1371/journal.ppat.1000012	Stochastic processes are key determinants of short-term evolution in influenza a virus Long intervals of stasis punctuated by bursts of positive selection in the seasonal evolution of influenza A virus 1918 Influenza: the mother of all pandemics Influenza pandemics of the 20th century Whole-genome analysis of human influenza A virus reveals multiple persistent lineages and reassortment among recent H3N2 viruses The evolution of human influenza viruses Integrating historical, clinical and molecular genetic data in order to explain the origin and virulence of the 1918 Spanish influenza virus
Temporal variation in the association between benzene and leukemia mortality	scientific article	en:Temporal variation in the association between benzene and leukemia mortality	2008-03		18335105	2265049	10.1289/ehp.10841	Investigating time patterns of variation in radiation cancer associations The age distribution of cancer and a multi-stage theory of carcinogenesis The Hallmarks of Cancer Negative bias in exposure-response trends in occupational studies: modeling the healthy workers survivor effect Benzene and Leukemia
How to get more out of molecular fingerprints: practical tools for microbial ecology	scientific article	en:How to get more out of molecular fingerprints: practical tools for microbial ecology	2008-03-06				10.1111/j.1462-2920.2008.01572.x	Environments shape the nucleotide composition of genomes
Community-based intervention to reduce pesticide exposure to farmworkers and potential take-home exposure to their families	scientific article	en:Community-based intervention to reduce pesticide exposure to farmworkers and potential take-home exposure to their families	2008-03-26		18368011	4545293	10.1038/jes.2008.18	Occupational behaviors and farmworkers' pesticide exposure: findings from a study in Monterey County, California Community-based participatory research: lessons learned from the Centers for Children's Environmental Health and Disease Prevention Research Concentrations of dialkyl phosphate metabolites of organophosphorus pesticides in the U.S. population Evaluation of take-home organophosphorus pesticide exposure among agricultural workers and their children Exposure and Absorption of Hazardous Materials through the Skin
Rapid point-of-care test to detect broad ranges of protective antigen-specific immunoglobulin G concentrations in recipients of the U.S.-licensed anthrax vaccine	scientific article	en:Rapid point-of-care test to detect broad ranges of protective antigen-specific immunoglobulin G concentrations in recipients of the U.S.-licensed anthrax vaccine	2008-04	Clinical Biochemistry	18321882	2292649	10.1128/CVI.00473-07	Rapid, sensitive, and specific lateral-flow immunochromatographic device to measure anti-anthrax protective antigen immunoglobulin g in serum and whole blood Comparison of a multiplexed fluorescent covalent microsphere immunoassay and an enzyme-linked immunosorbent assay for measurement of human immunoglobulin G antibodies to anthrax toxins
International study of factors affecting human chromosome translocations	scientific article	en:International study of factors affecting human chromosome translocations	2008-04-30		18337160	2696320	10.1016/j.mrgentox.2008.01.005	Chromosomal aberrations in lymphocytes of healthy subjects and risk of cancer
Neurobehavioral testing in human risk assessment	scientific article	en:Neurobehavioral testing in human risk assessment	2008-05		18539229	2492890	10.1016/j.neuro.2008.04.003	Organophosphate pesticide exposure and neurodevelopment in young Mexican-American children Biomonitoring of 2,4-dichlorophenoxyacetic acid exposure and dose in farm families Dose-effect relationships between manganese exposure and neurological, neuropsychological and pulmonary function in confined space bridge welders Studying health outcomes in farmworker populations exposed to pesticides Prenatal insecticide exposures and birth weight and length among an urban minority cohort Association of in utero organophosphate pesticide exposure and fetal growth and length of gestation in an agricultural population Glyphosate biomonitoring for farmers and their families: results from the Farm Family Exposure Study Long-term neurobehavioral health effects of methyl parathion exposure in children in Mississippi and Ohio Low level methylmercury exposure affects neuropsychological function in adults The concentrations of arsenic and other toxic elements in Bangladesh's drinking water Review of the upper airway, including olfaction, as mediator of symptoms Children's exposure to chlorpyrifos and parathion in an agricultural community in central Washington State Biological monitoring of organophosphorus pesticide exposure among children of agricultural workers in central Washington State
Low-level human equivalent gestational lead exposure produces supernormal scotopic electroretinograms, increased retinal neurogenesis, and decreased retinal dopamine utilization in rats	scientific article	en:Low-level human equivalent gestational lead exposure produces supernormal scotopic electroretinograms, increased retinal neurogenesis, and decreased retinal dopamine utilization in rats	2008-05		18470321	2367685	10.1289/ehp.11268	Early environmental origins of neurodegenerative disease in later life
Distinct DNA exit and packaging portals in the virus Acanthamoeba polyphaga mimivirus	scientific article	en:Distinct DNA exit and packaging portals in the virus Acanthamoeba polyphaga mimivirus	2008-05-13		18479185	2430901	10.1371/journal.pbio.0060114	Ultrastructural characterization of the giant volcano-like virus factory of Acanthamoeba polyphaga Mimivirus Structure of epsilon15 bacteriophage reveals genome organization and DNA packaging/injection apparatus Involvement of the portal at an early step in herpes simplex virus capsid assembly Structure and polymorphism of the UL6 portal protein of herpes simplex virus type 1 Common origin of four diverse families of large eukaryotic DNA viruses
Human innate immune responses to hexamethylene diisocyanate (HDI) and HDI-albumin conjugates	scientific article	en:Human innate immune responses to hexamethylene diisocyanate (HDI) and HDI-albumin conjugates	2008-06		18498542	3131007	10.1111/j.1365-2222.2008.02982.x	Urinary Hexane Diamine to Assess Respiratory Exposure to Hexamethylene Diisocyanate Aerosol: A Human Inhalation Study The human chitotriosidase gene. Nature of inherited enzyme deficiency Chitotriosidase, a chitinase, and the 39-kDa human cartilage glycoprotein, a chitin-binding lectin, are homologues of family 18 glycosyl hydrolases secreted by human macrophages
Cyclic AMP acts through Rap1 and JNK signaling to increase expression of cutaneous smooth muscle alpha2C-adrenoceptors	scientific article	en:Cyclic AMP acts through Rap1 and JNK signaling to increase expression of cutaneous smooth muscle alpha2C-adrenoceptors	2008-07		18487435	2494767	10.1152/ajpheart.00084.2008	Estrogen increases smooth muscle expression of  2C-adrenoceptors and cold-induced constriction of cutaneous arteries Molecular cloning, sequencing and functional study of the promoter region of the human alpha2C4-adrenergic receptor gene
Reported visual impairment and risk of suicide: the 1986-1996 national health interview surveys	scientific article	en:Reported visual impairment and risk of suicide: the 1986-1996 national health interview surveys	2008-07-14		18625946	2630284	10.1001/archopht.126.7.975	Prevalence and burden of self-reported blindness and low vision for individuals living in institutions: a nationwide survey
Genetic and serologic properties of Zika virus associated with an epidemic, Yap State, Micronesia, 2007	scientific article	en:Genetic and serologic properties of Zika virus associated with an epidemic, Yap State, Micronesia, 2007	2008-08	Zika virus Zika fever Yap	18680646	2600394	10.3201/eid1408.080287	Zika virus. I. Isolations and serological specificity Zika virus. II. Pathogenicity and physical properties Zika virus: further isolations in the Zika area, and some studies on the strains isolated Twelve isolations of Zika virus from Aedes (Stegomyia) africanus (Theobald) taken in and above a Uganda forest Isolation of Zika virus from Aedes aegypti mosquitoes in Malaysia Zika Virus Infection in Man Arthropod-borne viral infections of man in Nigeria, 1964-1970 Zika virus infections in Nigeria: virological and seroepidemiological investigations in Oyo State Zika virus, a cause of fever in Central Java, Indonesia Zika virus infection experimentally induced in a human volunteer Detection of anti-arboviral immunoglobulin G by using a monoclonal antibody-based capture enzyme-linked immunosorbent assay Standardization of immunoglobulin M capture enzyme-linked immunosorbent assays for routine diagnosis of arboviral infections Duplex microsphere-based immunoassay for detection of anti-West Nile virus and anti-St. Louis encephalitis virus immunoglobulin m antibodies Antigenic relationships between flaviviruses as determined by cross-neutralization tests with polyclonal antisera Phylogeny of the genus Flavivirus Original antigenic sin in dengue Quantitative competitive reverse transcription-PCR for quantification of dengue virus RNA High-throughput detection of West Nile virus RNA Glycosylation and antigenic variation among Kunjin virus isolates Extensive nucleotide changes and deletions within the envelope glycoprotein gene of Euro-African West Nile viruses
7 Getting There from Here: Research on the Effects of Work–Family Initiatives on Work–Family Conflict and Business Outcomes	scientific article	en:7 Getting There from Here: Research on the Effects of Work–Family Initiatives on Work–Family Conflict and Business Outcomes	2008-08		20589229	2892913	10.1080/19416520802211610	Fit inside the work-family black box: An ecology of the life course, cycles of control reframing
Mirror-induced behavior in the magpie (Pica pica): evidence of self-recognition	scientific article	en:Mirror-induced behavior in the magpie (Pica pica): evidence of self-recognition	2008-08-19		18715117	2517622	10.1371/journal.pbio.0060202	The monkey in the mirror: hardly a stranger Avian brains and a new understanding of vertebrate brain evolution Mirror self-recognition in the bottlenose dolphin: a case of cognitive convergence
One-step RT-PCR for detection of Zika virus	Scientific paper published in Journal of Clinical Virology	en:One-step RT-PCR for detection of Zika virus	2008-09	Zika virus Zika fever	18674965		10.1016/j.jcv.2008.05.005	Full-length sequencing and genomic characterization of Bagaza, Kedougou, and Zika viruses
Role of S-nitrosylation in apoptosis resistance and carcinogenesis	scientific article	en:Role of S-nitrosylation in apoptosis resistance and carcinogenesis	2008-09	Clinical Biochemistry	18474261	3226739	10.1016/j.niox.2008.04.019	Nitric Oxide Regulates Cell Sensitivity to Cisplatin-Induced Apoptosis through S-Nitrosylation and Inhibition of Bcl-2 Ubiquitination Inhibition of death receptor signals by cellular FLIP Prevention of apoptosis by Bcl-2: release of cytochrome c from mitochondria blocked Bcl-2 heterodimerizes in vivo with a conserved homolog, Bax, that accelerates programmed cell death Nitric oxide synthases in mammals
Effect of wrist posture on carpal tunnel pressure while typing	scientific article	en:Effect of wrist posture on carpal tunnel pressure while typing	2008-09		18383144	2649727	10.1002/jor.20599	Guidelines for Wrist Posture Based on Carpal Tunnel Pressure Thresholds Wrist and Forearm Posture from Typing on Split and Vertically Inclined Computer Keyboards Position of the wrist associated with the lowest carpal-tunnel pressure: implications for splint design Work posture, workstation design, and musculoskeletal discomfort in a VDT data entry task
Malaria parasite pre-erythrocytic stage infection: gliding and hiding	scientific article	en:Malaria parasite pre-erythrocytic stage infection: gliding and hiding	2008-09-11		18779047	2610487	10.1016/j.chom.2008.08.010	Hepatocyte permissiveness to Plasmodium infection is conveyed by a short and structurally conserved region of the CD81 large extracellular domain Release of hepatic Plasmodium yoelii merozoites into the pulmonary microvasculature Intravital observation of Plasmodium berghei sporozoite infection of the liver The global distribution of clinical episodes of Plasmodium falciparum malaria Protein kinases of the human malaria parasite Plasmodium falciparum: the kinome of a divergent eukaryote Cell-passage activity is required for the malarial parasite to cross the liver sinusoidal cell layer
The public road to high-quality curated biological pathways	scientific article	en:The public road to high-quality curated biological pathways	2008-10	drug discovery	18652912	3646620	10.1016/j.drudis.2008.06.013	KEGG for linking genomes to life and the environment MAPPFinder: using Gene Ontology and GenMAPP to create a global gene-expression profile from microarray data
Inhalation vs. aspiration of single-walled carbon nanotubes in C57BL/6 mice: inflammation, fibrosis, oxidative stress, and mutagenesis	scientific article	en:Inhalation vs. aspiration of single-walled carbon nanotubes in C57BL/6 mice: inflammation, fibrosis, oxidative stress, and mutagenesis	2008-10	cell biology	18658273	2575941	10.1152/ajplung.90287.2008	Alteration of deposition pattern and pulmonary response as a result of improved dispersion of aspirated single-walled carbon nanotubes in a mouse model Cardiovascular effects of pulmonary exposure to single-wall carbon nanotubes Nanoparticles: pharmacological and toxicological significance Combustion-derived nanoparticles: a review of their toxicology following inhalation exposure Unusual inflammatory and fibrogenic pulmonary responses to single-walled carbon nanotubes in mice
Occupational behaviors and farmworkers' pesticide exposure: findings from a study in Monterey County, California	scientific article	en:Occupational behaviors and farmworkers' pesticide exposure: findings from a study in Monterey County, California	2008-10		18702096	2605684	10.1002/ajim.20622	Community-based intervention to reduce pesticide exposure to farmworkers and potential take-home exposure to their families Organophosphate pesticide exposure and neurodevelopment in young Mexican-American children Community-based participatory research: lessons learned from the Centers for Children's Environmental Health and Disease Prevention Research Association of pesticide exposure with neurologic dysfunction and disease Concentrations of dialkyl phosphate metabolites of organophosphorus pesticides in the U.S. population Evaluation of take-home organophosphorus pesticide exposure among agricultural workers and their children Pesticide safety among farmworkers: perceived risk and perceived control as factors reflecting environmental justice Implementing a community-based social marketing project to improve agricultural worker health Work characteristics and pesticide exposures among migrant agricultural families: a community-based research approach Exposure and Absorption of Hazardous Materials through the Skin
Distinct roles of PDE4 and PDE10A in the regulation of cAMP/PKA signaling in the striatum	scientific article	en:Distinct roles of PDE4 and PDE10A in the regulation of cAMP/PKA signaling in the striatum	2008-10-15		18923023	2814340	10.1523/JNEUROSCI.2518-08.2008	Rolipram: a specific phosphodiesterase 4 inhibitor with potential antipsychotic activity Deletion of phosphodiesterase 4D in mice shortens alpha(2)-adrenoceptor-mediated anesthesia, a behavioral correlate of emesis Cloning and characterization of a novel human phosphodiesterase that hydrolyzes both cAMP and cGMP (PDE10A) DARPP-32: Regulator of the Efficacy of Dopaminergic Neurotransmission
Alteration of blood-brain barrier integrity by retroviral infection	scientific article	en:Alteration of blood-brain barrier integrity by retroviral infection	2008-11		19008946	2575404	10.1371/journal.ppat.1000205	The C-terminus of the HTLV-1 Tax oncoprotein mediates interaction with the PDZ domain of cellular proteins
Mutations in the SLC2A9 gene cause hyperuricosuria and hyperuricemia in the dog	scientific article	en:Mutations in the SLC2A9 gene cause hyperuricosuria and hyperuricemia in the dog	2008-11		18989453	2573870	10.1371/journal.pgen.1000246	Sex-specific association of the putative fructose transporter SLC2A9 variants with uric acid levels is modified by BMI Genome-wide association study identifies genes for biomarkers of cardiovascular disease: serum urate and dyslipidemia Molecular physiology of urate transport Clinical and molecular analysis of patients with renal hypouricemia in Japan-influence of URAT1 gene on urinary urate excretion PANTHER: a browsable database of gene products organized by biological function, using curated protein family and subfamily classification Molecular identification of a renal urate anion exchanger that regulates blood urate levels Predicting deleterious amino acid substitutions Cloning and expression analysis of a novel member of the facilitative glucose transporter family, SLC2A9 (GLUT9)
Routine diagnostic X-ray examinations and increased frequency of chromosome translocations among U.S. radiologic technologists	scientific article	en:Routine diagnostic X-ray examinations and increased frequency of chromosome translocations among U.S. radiologic technologists	2008-11-01		18974125	2586176	10.1158/0008-5472.CAN-08-1691	International study of factors affecting human chromosome translocations
The global burden of snakebite: a literature analysis and modelling based on regional estimates of envenoming and deaths	scientific article	en:The global burden of snakebite: a literature analysis and modelling based on regional estimates of envenoming and deaths	2008-11-04		18986210	2577696	10.1371/journal.pmed.0050218	Measuring the burden of neglected tropical diseases: the global burden of disease framework Confronting the neglected problem of snake bite envenoming: the need for a global partnership Snakebite mortality in the world Snake-bites: appraisal of the global situation
Striatal dysregulation of Cdk5 alters locomotor responses to cocaine, motor learning, and dendritic morphology	scientific article	en:Striatal dysregulation of Cdk5 alters locomotor responses to cocaine, motor learning, and dendritic morphology	2008-11-25		19017804	2587606	10.1073/pnas.0806078105	A role for myosin VI in postsynaptic structure and glutamate receptor endocytosis Phosphorylation of DARPP-32 by Cdk5 modulates dopamine signalling in neurons
PKMzeta maintains spatial, instrumental, and classically conditioned long-term memories	scientific article	en:PKMzeta maintains spatial, instrumental, and classically conditioned long-term memories	2008-12-23		19108606	2605920	10.1371/journal.pbio.0060318	Persistent activation of the zeta isoform of protein kinase C in the maintenance of long-term potentiation
Ongoing challenges in the management of malaria	Scientific Article about Malaria from Malaria Journal	en:Ongoing challenges in the management of malaria	2009	infectious disease	19818169	2760237	10.1186/1475-2875-8-S1-S2	Impact of the large-scale deployment of artemether/lumefantrine on the malaria disease burden in Africa: case studies of South Africa, Zambia and Ethiopia Antimalarial drug quality in the most severely malarious parts of Africa - a six country study Impact of artemisinin-based combination therapy and insecticide-treated nets on malaria burden in Zanzibar Reduction of malaria transmission to Anopheles mosquitoes with a six-dose regimen of co-artemether Intermittent presumptive treatment for malaria Antimalarial drug resistance
Identification of Plasmodium malariae, a human malaria parasite, in imported chimpanzees	scientific article	en:Identification of Plasmodium malariae, a human malaria parasite, in imported chimpanzees	2009	malaria	19823579	2756624	10.1371/journal.pone.0007412	A new malaria agent in African hominids Chimpanzee malaria parasites related to Plasmodium ovale in Africa Naturally acquired Plasmodium knowlesi malaria in human, Thailand
GIFtS: annotation landscape analysis with GeneCards	scientific article	en:GIFtS: annotation landscape analysis with GeneCards	2009		19852797	2774327	10.1186/1471-2105-10-348	Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project GeneTide--Terra Incognita Discovery Endeavor: a new transcriptome focused member of the GeneCards/GeneNote suite of databases Human Gene-Centric Databases at the Weizmann Institute of Science: GeneCards, UDB, CroW 21 and HORDE Gene ontology: tool for the unification of biology. The Gene Ontology Consortium
Expression of FOXA1 and GATA-3 in breast cancer: the prognostic significance in hormone receptor-negative tumours	scientific article	en:Expression of FOXA1 and GATA-3 in breast cancer: the prognostic significance in hormone receptor-negative tumours	2009	breast cancer	19549328	2716509	10.1186/bcr2327	GATA-3 and the regulation of the mammary luminal cell fate GATA-3 maintains the differentiation of the luminal cell fate in the mammary gland BRCA1 and FOXA1 proteins coregulate the expression of the cell cycle-dependent kinase inhibitor p27(Kip1) From the Cover: Location analysis of estrogen receptor alpha target promoters reveals that FOXA1 defines a domain of the estrogen response
Impact of the large-scale deployment of artemether/lumefantrine on the malaria disease burden in Africa: case studies of South Africa, Zambia and Ethiopia	scientific article	en:Impact of the large-scale deployment of artemether/lumefantrine on the malaria disease burden in Africa: case studies of South Africa, Zambia and Ethiopia	2009	infectious disease	19818175	2760243	10.1186/1475-2875-8-S1-S8	Impact of artemisinin-based combination therapy and insecticide-treated nets on malaria burden in Zanzibar Effect of artemether-lumefantrine policy and improved vector control on malaria burden in KwaZulu-Natal, South Africa
Coartem: the journey to the clinic	scientific article	en:Coartem: the journey to the clinic	2009	infectious disease	19818170	2760238	10.1186/1475-2875-8-S1-S3	Impact of the large-scale deployment of artemether/lumefantrine on the malaria disease burden in Africa: case studies of South Africa, Zambia and Ethiopia The clinical efficacy of artemether/lumefantrine (Coartem) A randomized trial of artemether-lumefantrine versus mefloquine-artesunate for the treatment of uncomplicated multi-drug resistant Plasmodium falciparum on the western border of Thailand
Glatiramer acetate reduces the risk for experimental cerebral malaria: a pilot study	scientific article	en:Glatiramer acetate reduces the risk for experimental cerebral malaria: a pilot study	2009	infectious disease	19250545	2651188	10.1186/1475-2875-8-36	Nasal vaccination with a proteosome-based adjuvant and glatiramer acetate clears beta-amyloid in a mouse model of Alzheimer disease Therapeutic vaccine for acute and chronic motor neuron diseases: implications for amyotrophic lateral sclerosis
Chloroquine reduces arylsulphatase B activity and increases chondroitin-4-sulphate: implications for mechanisms of action and resistance	scientific article	en:Chloroquine reduces arylsulphatase B activity and increases chondroitin-4-sulphate: implications for mechanisms of action and resistance	2009	infectious disease	20017940	2805689	10.1186/1475-2875-8-303	Arylsulfatase B regulates colonic epithelial cell migration by effects on MMP9 expression and RhoA activation
The clinical efficacy of artemether/lumefantrine (Coartem)	scientific article	en:The clinical efficacy of artemether/lumefantrine (Coartem)	2009	infectious disease	19818172	2760240	10.1186/1475-2875-8-S1-S5	A randomized trial of artemether-lumefantrine versus mefloquine-artesunate for the treatment of uncomplicated multi-drug resistant Plasmodium falciparum on the western border of Thailand Reduction of malaria transmission to Anopheles mosquitoes with a six-dose regimen of co-artemether
The accuracy of clinical malaria case reporting at primary health care facilities in Honiara, Solomon Islands	scientific article	en:The accuracy of clinical malaria case reporting at primary health care facilities in Honiara, Solomon Islands	2009	infectious disease	19389239	2685810	10.1186/1475-2875-8-80	Clustered local transmission and asymptomatic Plasmodium falciparum and Plasmodium vivax malaria infections in a recently emerged, hypoendemic Peruvian Amazon community
PCR-based methods for the detection of L1014 kdr mutation in Anopheles culicifacies sensu lato	scientific article	en:PCR-based methods for the detection of L1014 kdr mutation in Anopheles culicifacies sensu lato	2009	infectious disease	19594947	2717976	10.1186/1475-2875-8-154	A simplified high-throughput method for pyrethroid knock-down resistance (kdr) detection in Anopheles gambiae Analysis of any point mutation in DNA. The amplification refractory mutation system (ARMS)
Chylomicrons promote intestinal absorption and systemic dissemination of dietary antigen (ovalbumin) in mice	scientific article	en:Chylomicrons promote intestinal absorption and systemic dissemination of dietary antigen (ovalbumin) in mice	2009		20041190	2793525	10.1371/journal.pone.0008442	Shotgun proteomics implicates protease inhibition and complement activation in the antiinflammatory properties of HDL
Testosterone administration decreases generosity in the ultimatum game	scientific article	en:Testosterone administration decreases generosity in the ultimatum game	2009		20016825	2789942	10.1371/journal.pone.0008330	Oxytocin increases generosity in humans Irrational economic decision-making after ventromedial prefrontal damage: evidence from the Ultimatum Game
Biomechanics of running indicates endothermy in bipedal dinosaurs	scientific article	en:Biomechanics of running indicates endothermy in bipedal dinosaurs	2009		19911059	2772121	10.1371/journal.pone.0007783	Respiratory evolution facilitated the origin of pterosaur flight and aerial gigantism Evidence for avian intrathoracic air sacs in a new predatory dinosaur from Argentina Estimating dinosaur maximum running speeds using evolutionary robotics Chimpanzee locomotor energetics and the origin of human bipedalism Dinosaur fossils predict body temperatures
Genetic diversity of arginine catabolic mobile element in Staphylococcus epidermidis	scientific article	en:Genetic diversity of arginine catabolic mobile element in Staphylococcus epidermidis	2009		19893740	2768820	10.1371/journal.pone.0007722	Epidemiologic distribution of the arginine catabolic mobile element among selected methicillin-resistant and methicillin-susceptible Staphylococcus aureus isolates
Extreme cranial ontogeny in the upper cretaceous dinosaur pachycephalosaurus	scientific article	en:Extreme cranial ontogeny in the upper cretaceous dinosaur pachycephalosaurus	2009		19859556	2762616	10.1371/journal.pone.0007626	Major cranial changes during Triceratops ontogeny
CFH, C3 and ARMS2 are significant risk loci for susceptibility but not for disease progression of geographic atrophy due to AMD	scientific article	en:CFH, C3 and ARMS2 are significant risk loci for susceptibility but not for disease progression of geographic atrophy due to AMD	2009		19823576	2756620	10.1371/journal.pone.0007418	Age-related macular degeneration is associated with an unstable ARMS2 (LOC387715) mRNA A variant of mitochondrial protein LOC387715/ARMS2, not HTRA1, is strongly associated with age-related macular degeneration CFH Y402H confers similar risk of soft drusen and both forms of advanced AMD Susceptibility genes for age-related maculopathy on chromosome 10q26 A common haplotype in the complement regulatory gene factor H (HF1/CFH) predisposes individuals to age-related macular degeneration Automated analysis of digital fundus autofluorescence images of geographic atrophy in advanced age-related macular degeneration using confocal scanning laser ophthalmoscopy (cSLO) Complement factor H polymorphism in age-related macular degeneration
From the eye of the albatrosses: a bird-borne camera shows an association between albatrosses and a killer whale in the Southern Ocean	scientific article	en:From the eye of the albatrosses: a bird-borne camera shows an association between albatrosses and a killer whale in the Southern Ocean	2009		19809497	2752807	10.1371/journal.pone.0007322	Fast and fuel efficient? Optimal use of wind by flying albatrosses
Relationships of Cetacea (Artiodactyla) among mammals: increased taxon sampling alters interpretations of key fossils and character evolution	scientific article	en:Relationships of Cetacea (Artiodactyla) among mammals: increased taxon sampling alters interpretations of key fossils and character evolution	2009		19774069	2740860	10.1371/journal.pone.0007062	CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
Design parameters to control synthetic gene expression in Escherichia coli	scientific article	en:Design parameters to control synthetic gene expression in Escherichia coli	2009		19759823	2736378	10.1371/journal.pone.0007002	Engineering proteinase K using machine learning and synthetic genes SGDB: a database of synthetic genes re-designed for optimizing protein over-expression Gene Designer: a synthetic biology tool for constructing artificial DNA segments The codon Adaptation Index--a measure of directional synonymous codon usage bias, and its potential applications
Shiga toxin receptor Gb3Cer/CD77: tumor-association and promising therapeutic target in pancreas and colon cancer	scientific article	en:Shiga toxin receptor Gb3Cer/CD77: tumor-association and promising therapeutic target in pancreas and colon cancer	2009		19714252	2730034	10.1371/journal.pone.0006813	The bacterial colicin active against tumor cells in vitro and in vivo is verotoxin 1
A new basal sauropod dinosaur from the middle Jurassic of Niger and the early evolution of sauropoda	scientific article	en:A new basal sauropod dinosaur from the middle Jurassic of Niger and the early evolution of sauropoda	2009		19756139	2737122	10.1371/journal.pone.0006924	New dinosaurs link southern landmasses in the Mid-Cretaceous
Estimating impact forces of tail club strikes by ankylosaurid dinosaurs	scientific article	en:Estimating impact forces of tail club strikes by ankylosaurid dinosaurs	2009		19707581	2726940	10.1371/journal.pone.0006738	Dinosaur fossils predict body temperatures
Circular polymerase extension cloning of complex gene libraries and pathways	scientific article	en:Circular polymerase extension cloning of complex gene libraries and pathways	2009		19649325	2713398	10.1371/journal.pone.0006441	Generating a synthetic genome by whole genome assembly: phiX174 bacteriophage from synthetic oligonucleotides DNA cloning using in vitro site-specific recombination Construction of biologically functional bacterial plasmids in vitro Specific cleavage of simian virus 40 DNA by restriction endonuclease of Hemophilus influenzae
Geographic variation in venom allelic composition and diets of the widespread predatory marine gastropod Conus ebraeus	scientific article	en:Geographic variation in venom allelic composition and diets of the widespread predatory marine gastropod Conus ebraeus	2009		19606224	2707604	10.1371/journal.pone.0006245	Ecological release and venom evolution of a predatory marine snail at Easter Island Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data
No need to discriminate? Reproductive diploid males in a parasitoid with complementary sex determination	scientific article	en:No need to discriminate? Reproductive diploid males in a parasitoid with complementary sex determination	2009		19551142	2696080	10.1371/journal.pone.0006024	Molecular patterns of sex determination in the animal kingdom: a comparative study of the biology of reproduction Single locus complementary sex determination in Hymenoptera: an "unintelligent" design? Functionally reproductive diploid and haploid males in an inbreeding hymenopteran with complementary sex determination
Induction of empathy by the smell of anxiety	scientific article	en:Induction of empathy by the smell of anxiety	2009		19551135	2695008	10.1371/journal.pone.0005987	Impaired attentional selection following lesions to human pulvinar: evidence for homology between human and monkey Encoding human sexual chemosensory cues in the orbitofrontal and fusiform cortices
A fish eye out of water: ten visual opsins in the four-eyed fish, Anableps anableps	scientific article	en:A fish eye out of water: ten visual opsins in the four-eyed fish, Anableps anableps	2009		19551143	2696081	10.1371/journal.pone.0005970	Adaptive evolution of color vision of the Comoran coelacanth (Latimeria chalumnae) Molecular genetics of human color vision: the genes encoding blue, green, and red pigments
Complete primate skeleton from the Middle Eocene of Messel in Germany: morphology and paleobiology	scientific article	en:Complete primate skeleton from the Middle Eocene of Messel in Germany: morphology and paleobiology	2009		19492084	2683573	10.1371/journal.pone.0005723	The oldest Asian record of Anthropoidea Anthropoid primates from the Oligocene of Pakistan (Bugti Hills): data on early anthropoid evolution and biogeography SINE insertions in cladistic analyses and the phylogenetic affiliations of Tarsius bancanus to other primates
Diminished telomeric 3' overhangs are associated with telomere dysfunction in Hoyeraal-Hreidarsson syndrome	scientific article	en:Diminished telomeric 3' overhangs are associated with telomere dysfunction in Hoyeraal-Hreidarsson syndrome	2009		19461895	2680952	10.1371/journal.pone.0005666	TINF2 mutations result in very short telomeres: analysis of a large cohort of patients with dyskeratosis congenita and related bone marrow failure syndromes Mutations in the telomerase component NHP2 cause the premature ageing syndrome dyskeratosis congenita TINF2, a component of the shelterin telomere protection complex, is mutated in dyskeratosis congenita Telomere protection by mammalian Pot1 requires interaction with Tpp1 Genetic heterogeneity in autosomal recessive dyskeratosis congenita with one subtype due to mutations in the telomerase-associated protein NOP10 The POT1-TPP1 telomere complex is a telomerase processivity factor TPP1 is a homologue of ciliate TEBP-beta and interacts with POT1 to recruit telomerase Telomerase RNA level limits telomere maintenance in X-linked dyskeratosis congenita The telomeric protein TRF2 binds the ATM kinase and can inhibit the ATM-dependent DNA damage response A telomerase component is defective in the human disease dyskeratosis congenita Mammalian telomeres end in a large duplex loop X-linked dyskeratosis congenita is caused by mutations in a highly conserved gene with putative nucleolar functions Genomic sequencing
Phylogeny and biogeography of hawkmoths (Lepidoptera: Sphingidae): evidence from five nuclear genes	scientific article	en:Phylogeny and biogeography of hawkmoths (Lepidoptera: Sphingidae): evidence from five nuclear genes	2009		19492095	2683934	10.1371/journal.pone.0005719	Evidence of repeated and independent saltational evolution in a peculiar genus of sphinx moths (Proserpinus: Sphingidae)
Familial resemblance of borderline personality disorder features: genetic or cultural transmission?	scientific article	en:Familial resemblance of borderline personality disorder features: genetic or cultural transmission?	2009		19390632	2669723	10.1371/journal.pone.0005334	DSM-IV personality disorders in the National Comorbidity Survey Replication
Polo-like kinase-1 controls Aurora A destruction by activating APC/C-Cdh1	scientific article	en:Polo-like kinase-1 controls Aurora A destruction by activating APC/C-Cdh1	2009		19390576	2668763	10.1371/journal.pone.0005282	The Cdc14B-Cdh1-Plk1 axis controls the G2 DNA-damage-response checkpoint Polo-like kinase-1 is activated by aurora A to promote checkpoint recovery Plk1 regulates mitotic Aurora A function through betaTrCP-dependent degradation of hBora SCFbetaTrCP-mediated degradation of Claspin regulates recovery from the DNA replication checkpoint response Early mitotic degradation of Nek2A depends on Cdc20-independent interaction with the APC/C Plk1 regulates activation of the anaphase promoting complex by phosphorylating and triggering SCFbetaTrCP-dependent destruction of the APC Inhibitor Emi1 Relocation of Aurora B from centromeres to the central spindle at the metaphase to anaphase transition requires MKlp2 Role of Polo-like kinase in the degradation of early mitotic inhibitor 1, a regulator of the anaphase promoting complex/cyclosome M-phase kinases induce phospho-dependent ubiquitination of somatic Wee1 by SCFbeta-TrCP Mitotic regulation of the human anaphase-promoting complex by phosphorylation Prophase destruction of Emi1 by the SCF(betaTrCP/Slimb) ubiquitin ligase activates the anaphase promoting complex to allow progression beyond prometaphase A novel human protein of the maternal centriole is required for the final stages of cytokinesis and entry into S phase Processing, localization, and requirement of human separase for normal anaphase progression Timing of APC/C substrate degradation is determined by fzy/fzr specificity of destruction boxes Disruption of centrosome structure, chromosome segregation, and cytokinesis by misexpression of human Cdc14A phosphatase Directed proteomic analysis of the human nucleolus Cyclin A is destroyed in prometaphase and can delay chromosome alignment and anaphase Securin degradation is mediated by fzy and fzr, and is required for complete chromatid separation but not for cytokinesis The KEN box: an APC recognition signal distinct from the D box targeted by Cdh1 Characterization of GAPCenA, a GTPase activating protein for Rab6, part of which associates with the centrosome A family of putative tumor suppressors is structurally and functionally conserved in humans and yeast
Feline leukemia virus and other pathogens as important threats to the survival of the critically endangered Iberian lynx (Lynx pardinus)	scientific article	en:Feline leukemia virus and other pathogens as important threats to the survival of the critically endangered Iberian lynx (Lynx pardinus)	2009		19270739	2649436	10.1371/journal.pone.0004744	Initial sequence and comparative analysis of the cat genome MatGAT: an application that generates similarity/identity matrices using protein or DNA sequences CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
The role of inbreeding in the extinction of a European royal dynasty	scientific article	en:The role of inbreeding in the extinction of a European royal dynasty	2009		19367331	2664480	10.1371/journal.pone.0005174	Novel ATP6V1B1 and ATP6V0A4 mutations in autosomal recessive distal renal tubular acidosis with new evidence for hearing loss
Non-destructive sampling of ancient insect DNA	scientific article	en:Non-destructive sampling of ancient insect DNA	2009		19337382	2660418	10.1371/journal.pone.0005048	Ancient biomolecules from deep ice cores reveal a forested southern Greenland Ancient DNA
Changes in the treatment responses to artesunate-mefloquine on the northwestern border of Thailand during 13 years of continuous deployment	scientific article	en:Changes in the treatment responses to artesunate-mefloquine on the northwestern border of Thailand during 13 years of continuous deployment	2009		19234601	2641001	10.1371/journal.pone.0004551	A randomized trial of artemether-lumefantrine versus mefloquine-artesunate for the treatment of uncomplicated multi-drug resistant Plasmodium falciparum on the western border of Thailand Assessment of the pharmacodynamic properties of antimalarial drugs in vivo
The maintenance of traditions in marmosets: individual habit, not social conformity? A field experiment	scientific article	en:The maintenance of traditions in marmosets: individual habit, not social conformity? A field experiment	2009		19223965	2636861	10.1371/journal.pone.0004472	Imitation as faithful copying of a novel technique in marmoset monkeys
Mass stranding of marine birds caused by a surfactant-producing red tide	scientific article	en:Mass stranding of marine birds caused by a surfactant-producing red tide	2009		19234604	2641015	10.1371/journal.pone.0004550	Brevetoxicosis: red tides and marine mammal mortalities Inhalation toxicity of brevetoxin 3 in rats exposed for twenty-two days
H5N1 vaccine-specific B cell responses in ferrets primed with live attenuated seasonal influenza vaccines	scientific article	en:H5N1 vaccine-specific B cell responses in ferrets primed with live attenuated seasonal influenza vaccines	2009		19209231	2635969	10.1371/journal.pone.0004436	Cross-subtype immunity against avian influenza in persons recently vaccinated for influenza Live, attenuated influenza A H5N1 candidate vaccines provide broad cross-protection in mice and ferrets
New protocetid whale from the middle eocene of pakistan: birth on land, precocial development, and sexual dimorphism	scientific article	en:New protocetid whale from the middle eocene of pakistan: birth on land, precocial development, and sexual dimorphism	2009		19194487	2629576	10.1371/journal.pone.0004366	The position of Hippopotamidae within Cetartiodactyla
Number-based visual generalisation in the honeybee	scientific article	en:Number-based visual generalisation in the honeybee	2009		19173008	2629729	10.1371/journal.pone.0004263	Not everything that counts can be counted: ants use multiple metrics for a single nest trait Visual working memory in decision making by honey bees
Diagnosis of human visceral pentastomiasis	scientific article	en:Diagnosis of human visceral pentastomiasis	2009	infectious disease	19238218	2643528	10.1371/journal.pntd.0000320	Phylogenetic position of the Pentastomida and (pan)crustacean relationships
Characterization of occupational exposures to cleaning products used for common cleaning tasks--a pilot study of hospital cleaners	scientific article	en:Characterization of occupational exposures to cleaning products used for common cleaning tasks--a pilot study of hospital cleaners	2009		19327131	2678109	10.1186/1476-069X-8-11	Skin exposure to isocyanates: reasons for concern Ozone and limonene in indoor air: a source of submicron particle exposure
Nanoparticle inhalation impairs endothelium-dependent vasodilation in subepicardial arterioles	scientific article	en:Nanoparticle inhalation impairs endothelium-dependent vasodilation in subepicardial arterioles	2009		20077232	2808198	10.1080/15287390903232467	Pulmonary nanoparticle exposure disrupts systemic microvascular nitric oxide signaling Pulmonary response to intratracheal instillation of ultrafine versus fine titanium dioxide: role of particle surface area Nanoparticle inhalation augments particle-dependent systemic microvascular dysfunction Systemic microvascular dysfunction and inflammation after pulmonary particulate matter exposure Cardiovascular and systemic responses to inhaled pollutants in rodents: effects of ozone and particulate matter Identification of persons with cardiorespiratory conditions who are at risk of dying from the acute effects of ambient air particles Epidemiologic evidence of cardiovascular effects of particulate air pollution
Epidemiologic studies in agricultural populations: observations and future directions	scientific article	en:Epidemiologic studies in agricultural populations: observations and future directions	2009		19437268	2682692	10.1080/10599240902779436	Mortality in a cohort of licensed pesticide applicators in Florida
A hazardous substance exposure prevention rating method for intervention needs assessment and effectiveness evaluation: the Small Business Exposure Index	scientific article	en:A hazardous substance exposure prevention rating method for intervention needs assessment and effectiveness evaluation: the Small Business Exposure Index	2009		19323840	2679725	10.1186/1476-069X-8-10	Recruiting small manufacturing worksites that employ multiethnic, low-wage workforces into a cancer prevention research trial The precautionary principle in environmental science
Community-wide analysis of microbial genome sequence signatures	scientific article	en:Community-wide analysis of microbial genome sequence signatures	2009		19698104	2745766	10.1186/gb-2009-10-8-r85	Environments shape the nucleotide composition of genomes
CPDB: a database of circular permutation in proteins	scientific article	en:CPDB: a database of circular permutation in proteins	2009-01		18842637	2686539	10.1093/nar/gkn679	CPSARST: an efficient circular permutation search tool applied to the detection of novel protein structural relationships Osprey: a network visualization system Circularly permuted proteins in the protein structure database The Protein Data Bank
Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths	scientific article	en:Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths	2009-01		19165319	2617782	10.1371/journal.pgen.1000344	Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection Escherichia coli K-12: a cooperatively developed annotation snapshot--2005 Genome dynamics and diversity of Shigella species, the etiologic agents of bacillary dysentery Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial "pan-genome" MICheck: a web tool for fast checking of syntactic annotations of bacterial genomes Recognizing the pseudogenes in bacterial genomes MAFFT version 5: improvement in accuracy of multiple sequence alignment The global burden of diarrhoeal disease, as estimated from studies published between 1992 and 2000 Complete genome sequence and comparative genomics of Shigella flexneri serotype 2a strain 2457T Extensive mosaic structure revealed by the complete genome sequence of uropathogenic Escherichia coli Genome sequence of Shigella flexneri 2a: insights into pathogenicity through comparison with genomes of Escherichia coli K12 and O157 GC-content evolution in mammalian genomes: the biased gene conversion hypothesis Multiple independent origins of Shigella clones of Escherichia coli and convergent evolution of many of their characteristics Molecular archaeology of the Escherichia coli genome Molecular keys to speciation: DNA polymorphism and the control of genetic exchange in enterobacteria The effect of deleterious mutations on neutral molecular variation Escherichia fergusonii and Enterobacter taylorae, two new species of Enterobacteriaceae isolated from clinical specimens Statistical method for testing the neutral mutation hypothesis by DNA polymorphism
An integrative genomic and proteomic approach to chemosensitivity prediction	scientific article	en:An integrative genomic and proteomic approach to chemosensitivity prediction	2009-01		19082483	2667126	10.3892/ijo_00000134	Predicting Cancer Drug Response by Proteomic Profiling Crystal structure of human pyrroline-5-carboxylate reductase MatchMiner: a tool for batch navigation among gene and gene product identifiers
Reflections on early malaria vaccine studies, the first successful human malaria vaccination, and beyond	scientific article	en:Reflections on early malaria vaccine studies, the first successful human malaria vaccination, and beyond	2009-01-01	infectious disease	18973784	2637529	10.1016/j.vaccine.2008.10.028	HUMAN EXPERIMENTATION. CODE OF ETHICS OF THE WORLD MEDICAL ASSOCIATION. DECLARATION OF HELSINKI
Receptor complementation and mutagenesis reveal SR-BI as an essential HCV entry factor and functionally imply its intra- and extra-cellular domains	scientific article	en:Receptor complementation and mutagenesis reveal SR-BI as an essential HCV entry factor and functionally imply its intra- and extra-cellular domains	2009-02		19229312	2636890	10.1371/journal.ppat.1000310	Cellular cofactors affecting hepatitis C virus infection and replication Scavenger receptor BI and BII expression levels modulate hepatitis C virus infectivity Initiation of hepatitis C virus infection is dependent on cholesterol and cooperativity between CD81 and scavenger receptor B type I Human scavenger receptor class B type II (SR-BII) and cellular cholesterol efflux Infectious hepatitis C virus pseudo-particles containing functional E1-E2 envelope protein complexes The human scavenger receptor class B type I is a novel candidate receptor for the hepatitis C virus Identification of a PDZ-domain-containing protein that interacts with the scavenger receptor class B type I Characterization of hepatitis C virus E2 glycoprotein interaction with a putative cellular receptor, CD81 Binding of hepatitis C virus to CD81
Manganese exposure among smelting workers: blood manganese-iron ratio as a novel tool for manganese exposure assessment	scientific article	en:Manganese exposure among smelting workers: blood manganese-iron ratio as a novel tool for manganese exposure assessment	2009-02		19283519	3980868	10.1080/13547500902730672	A child with chronic manganese exposure from drinking water
Neglected disease research and development: how much are we really spending?	scientific article	en:Neglected disease research and development: how much are we really spending?	2009-02-03		19192946	2634791	10.1371/journal.pmed.1000030	A new era of hope for the world's most neglected diseases
What should be done to tackle ghostwriting in the medical literature?	scientific article	en:What should be done to tackle ghostwriting in the medical literature?	2009-02-03		19192943	2634793	10.1371/journal.pmed.1000023	Ghost authorship in industry-initiated randomised trials The trouble with medical journals Medical journals are an extension of the marketing arm of pharmaceutical companies
Donor-derived brain tumor following neural stem cell transplantation in an ataxia telangiectasia patient	scientific article	en:Donor-derived brain tumor following neural stem cell transplantation in an ataxia telangiectasia patient	2009-02-17		19226183	2642879	10.1371/journal.pmed.1000029	Adult neurogenesis and cellular brain repair with neural progenitors, precursors and stem cells
Wings, horns, and butterfly eyespots: how do complex traits evolve?	scientific article	en:Wings, horns, and butterfly eyespots: how do complex traits evolve?	2009-02-24		19243218	2652386	10.1371/journal.pbio.1000037	Conservation and evolution of cis-regulatory systems in ascomycete fungi Computational identification of developmental enhancers: conservation and function of transcription factor binding-site clusters in Drosophila melanogaster and Drosophila pseudoobscura
Seroepidemiology of human polyomaviruses	scientific article	en:Seroepidemiology of human polyomaviruses	2009-03		19325891	2655709	10.1371/journal.ppat.1000363	T antigen mutations are a human tumor-specific signature for Merkel cell polyomavirus Clonal integration of a polyomavirus in human Merkel cell carcinoma Identification of a novel polyomavirus from patients with acute respiratory tract infections Identification of a third human polyomavirus
Dust and chemical exposures, and miscarriage risk among women textile workers in Shanghai, China	scientific article	en:Dust and chemical exposures, and miscarriage risk among women textile workers in Shanghai, China	2009-03		18805889	2862777	10.1136/oem.2008.039065	Modeling, Estimation and Validation of Cotton Dust and Endotoxin Exposures in Chinese Textile Operations Association of petrochemical exposure with spontaneous abortion
Development of a test system to apply virus-containing particles to filtering facepiece respirators for the evaluation of decontamination procedures	scientific article	en:Development of a test system to apply virus-containing particles to filtering facepiece respirators for the evaluation of decontamination procedures	2009-03-15	food science Applied Microbiology and Biotechnology	19139225	2655466	10.1128/AEM.01653-08	Influenza virus transmission is dependent on relative humidity and temperature Comparison of methods for detection and enumeration of airborne microorganisms collected by liquid impingement
Motor control of lumbar instability following exposure to various cyclic load magnitudes	scientific article	en:Motor control of lumbar instability following exposure to various cyclic load magnitudes	2009-04-15		19367420	2899589	10.1007/s00586-009-0952-6	Neuromuscular Response to Cyclic Lumbar Twisting
Positive associations between ionizing radiation and lymphoma mortality among men	scientific article	en:Positive associations between ionizing radiation and lymphoma mortality among men	2009-04-15		19270049	2732978	10.1093/aje/kwp018	Leukemia Mortality among Workers at the Savannah River Site Benzene Exposure and Risk of Non-Hodgkin Lymphoma A comparison of statistical methods for estimation of less than detectable ionising radiation exposures Assessment of plutonium exposures for an epidemiological study of US nuclear workers Risk of cancer after low doses of ionising radiation: retrospective cohort study in 15 countries Bias and uncertainty of penetrating photon dose measured by film dosemeters in an epidemiological study of US nuclear workers Negative bias in exposure-response trends in occupational studies: modeling the healthy workers survivor effect
Distribution and extinction of ungulates during the Holocene of the southern Levant	scientific article	en:Distribution and extinction of ungulates during the Holocene of the southern Levant	2009-04-29		19401760	2670510	10.1371/journal.pone.0005316	Explaining the Pleistocene megafaunal extinctions: models, chronologies, and assumptions
Genetic detection and characterization of Lujo virus, a new hemorrhagic fever-associated arenavirus from southern Africa	scientific article	en:Genetic detection and characterization of Lujo virus, a new hemorrhagic fever-associated arenavirus from southern Africa	2009-05		19478873	2680969	10.1371/journal.ppat.1000455	Genome sequencing in microfabricated high-density picolitre reactors Tsg101 and the vacuolar protein sorting pathway are essential for HIV-1 budding Tsg101, a homologue of ubiquitin-conjugating (E2) enzymes, binds the L domain in HIV type 1 Pr55(Gag) Genetic diversity among Lassa virus strains WW domains of Nedd4 bind to the proline-rich PY motifs in the epithelial Na+ channel deleted in Liddle's syndrome Oliveros virus: a novel arenavirus from Argentina Sequencing studies of pichinde arenavirus S RNA indicate a novel coding strategy, an ambisense viral S RNA
Data sharing in genomics--re-shaping scientific practice	scientific article	en:Data sharing in genomics--re-shaping scientific practice	2009-05	data sharing genomics scientific culture	19308065	2672783	10.1038/nrg2573	Genome-wide association studies for complex traits: consensus, uncertainty and challenges Share and share alike: deciding how to distribute the scientific and social benefits of genomic data Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls Assessing the impact of biobanks Data withholding in academic genetics: evidence from a national survey Protecting privacy in an information age: The problem of privacy in public Ethical and practical issues associated with aggregating databases Genetics. No longer de-identified Resolving individuals contributing trace amounts of DNA to highly complex mixtures using high-density SNP genotyping microarrays From genetic privacy to open consent Research ethics and the challenge of whole-genome sequencing Research ethics recommendations for whole-genome research: consensus statement DNA data sharing: research participants' perspectives Partnership in U.K. Biobank: a third way for genomic property? Sample, data use and protection in biobanking in Europe: legal issues Informed consent in the genomics era Responsibilities and obligations of using human research specimens transported across national boundaries Taking tissue seriously means taking communities seriously Reuse of samples: ethical issues encountered by two institutional ethics review committees in Kenya The complexities of ethical evaluation of genomics research
The impact of divergence time on the nature of population structure: an example from Iceland	scientific article	en:The impact of divergence time on the nature of population structure: an example from Iceland	2009-06		19503599	2684636	10.1371/journal.pgen.1000505	Japanese population structure, based on SNP genotypes from 7003 individuals compared to other ethnic groups: effects on population-based association studies Genes mirror geography within Europe A second generation human haplotype map of over 3.1 million SNPs Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls Population structure and eigenanalysis mtDna and the islands of the North Atlantic: estimating the proportions of Norse and Gaelic ancestry Estimating Scandinavian and Gaelic ancestry in the male settlers of Iceland
Zika Virus Outbreak on Yap Island, Federated States of Micronesia	2009 scientific article	en:Zika virus outbreak on Yap Island, Federated States of Micronesia	2009-06-11	Zika virus Zika fever	19516034		10.1056/nejmoa0805715	Full-length sequencing and genomic characterization of Bagaza, Kedougou, and Zika viruses Phylogeny of the genus Flavivirus Zika Virus Infection in Man Arthropod-borne virus antibodies in sera from residents of south-east Asia Neutralizing antibodies against arthropod-borne viruses in the sera of long-time residents of Malaya and Borneo A serological survey of arboviruses in Gabon Arthropod-borne virus antibodies in sera of residents of Kainji Lake Basin, Nigeria 1980 A sero-epidemiological survey for certain arboviruses (Togaviridae) in Pakistan A survey for arboviral antibodies in sera of humans and animals in Lombok, Republic of Indonesia Surveillance of the circulation of arbovirus of medical interest in the region of eastern Senegal Epidemiological investigations on arbovirus infections at Igbo-Ora, Nigeria Arthropod-borne viral infections of man in Nigeria, 1964-1970 Zika virus. II. Pathogenicity and physical properties Vectors of the 1969 yellow fever epidemic on the Jos Plateau, Nigeria Isolation of Zika virus from Aedes aegypti mosquitoes in Malaysia Zika virus infections in Nigeria: virological and seroepidemiological investigations in Oyo State Laboratory infection with Zika virus after vaccination against yellow fever Zika virus, a cause of fever in Central Java, Indonesia An outbreak of dengue fever in Yap State Epidemic of dengue-4 virus in Yap State, Federated States of Micronesia, and implication of Aedes hensilli as an epidemic vector Genetic and serologic properties of Zika virus associated with an epidemic, Yap State, Micronesia, 2007 Standardization of immunoglobulin M capture enzyme-linked immunosorbent assays for routine diagnosis of arboviral infections Antigenic relationships between flaviviruses as determined by cross-neutralization tests with polyclonal antisera Rapid detection and typing of dengue viruses from clinical samples by using reverse transcriptase-polymerase chain reaction Comparison of vero cell plaque assay, TaqMan reverse transcriptase polymerase chain reaction RNA assay, and VecTest antigen assay for detection of West Nile virus in field-collected mosquitoes Re-emergence of Chikungunya and O'nyong-nyong viruses: evidence for distinct geographical lineages and distant evolutionary relationships Original antigenic sin in dengue "Original antigenic sin" phenomenon in experimental flavivirus infections of guinea pigs: studies by enzyme-linked immunosorbent assay Epidemic West Nile encephalitis, New York, 1999: results of a household-based seroepidemiological survey Levels of IgM antibodies against dengue virus in Rio de Janeiro, Brazil Persistence of virus-reactive serum immunoglobulin m antibody in confirmed west nile virus encephalitis cases Development and persistence of West Nile virus-specific immunoglobulin M (IgM), IgA, and IgG in viremic blood donors Virus and antibody dynamics in acute west nile virus infection
Programmed cellular necrosis mediated by the pore-forming alpha-toxin from Clostridium septicum	scientific article	en:Programmed cellular necrosis mediated by the pore-forming alpha-toxin from Clostridium septicum	2009-07		19609357	2705182	10.1371/journal.ppat.1000516	Apoptosis, pyroptosis, and necrosis: mechanistic description of dead and dying eukaryotic cells alpha-Toxin is a mediator of Staphylococcus aureus-induced cell death and activates caspases via the intrinsic death pathway independently of death receptor signaling Calcium-dependent signaling pathways in T cells. Potential role of calpain, protein tyrosine phosphatase 1b, and p130Cas in integrin-mediated signaling events
Political economy of US states and rates of fatal occupational injury	scientific article	en:Political economy of US states and rates of fatal occupational injury	2009-08		19542025	2707476	10.2105/AJPH.2007.131409	Deindustrialisation and the long term decline in fatal occupational injuries Diversity of trends in occupational injury mortality in the United States, 1980-96 Trends in rates of occupational fatal injuries in the United States (1983-92)
Lessons learned from Chicago's emergency response to mass evacuations caused by Hurricane Katrina	scientific article	en:Lessons learned from Chicago's emergency response to mass evacuations caused by Hurricane Katrina	2009-08		19197088	2707481	10.2105/AJPH.2007.126680	Depressive symptoms among firefighters and related factors after the response to Hurricane Katrina
HIV-1 Vpu neutralizes the antiviral factor Tetherin/BST-2 by binding it and directing its beta-TrCP2-dependent degradation	scientific article	en:HIV-1 Vpu neutralizes the antiviral factor Tetherin/BST-2 by binding it and directing its beta-TrCP2-dependent degradation	2009-09	HIV	19730691	2729927	10.1371/journal.ppat.1000574	Vpu directs the degradation of the human immunodeficiency virus restriction factor BST-2/Tetherin via a {beta}TrCP-dependent mechanism Inhibition of Lassa and Marburg virus production by tetherin Broad-spectrum inhibition of retroviral and filoviral particle release by tetherin Ubiquitination of serine, threonine, or lysine residues on the cytoplasmic tail can induce ERAD of MHC-I by viral E3 ligase mK3 Silencing of both beta-TrCP1 and HOS (beta-TrCP2) is required to suppress human immunodeficiency virus type 1 Vpu-mediated CD4 down-modulation Parkin mediates nonclassical, proteasomal-independent ubiquitination of synphilin-1: implications for Lewy body formation Pseudosubstrate regulation of the SCF(beta-TrCP) ubiquitin ligase by hnRNP-U ATF4 degradation relies on a phosphorylation-dependent interaction with the SCF(betaTrCP) ubiquitin ligase The F-box protein family Differential activities of the human immunodeficiency virus type 1-encoded Vpu protein are regulated by phosphorylation and occur in different cellular compartments Molecular cloning and chromosomal mapping of a bone marrow stromal cell surface gene, BST2, that may be involved in pre-B-cell growth
Zika virus outside Africa	2009 scientific article	en:Zika virus outside Africa	2009-09	Zika virus Zika fever	19788800	2819875	10.3201/eid1509.090442	Zika virus. I. Isolations and serological specificity Zika virus. II. Pathogenicity and physical properties Yellow fever and Zika virus epizootics and enzootics in Uganda
Task shifting for scale-up of HIV care: evaluation of nurse-centered antiretroviral treatment at rural health centers in Rwanda	scientific article	en:Task shifting for scale-up of HIV care: evaluation of nurse-centered antiretroviral treatment at rural health centers in Rwanda	2009-10	HIV	19823569	2752160	10.1371/journal.pmed.1000163	Use of task-shifting to rapidly scale-up HIV treatment services: experiences from Lusaka, Zambia
Intracellular serotonin modulates insulin secretion from pancreatic beta-cells by protein serotonylation	scientific article	en:Intracellular serotonin modulates insulin secretion from pancreatic beta-cells by protein serotonylation	2009-10		19859528	2760755	10.1371/journal.pbio.1000229	Serotonin transamidates Rab4 and facilitates its binding to the C terminus of serotonin transporter The Rab27a/granuphilin complex regulates the exocytosis of insulin-containing dense-core granules
Lost in localization: A solution with neuroinformatics 2.0?		en:Lost in localization: a solution with neuroinformatics 2.0?	2009-10-15	neuroinformatics	19497377		10.1016/j.neuroimage.2009.05.073	Scientific citations in Wikipedia
Global status of DDT and its alternatives for use in vector control to prevent disease	scientific article	en:Global status of DDT and its alternatives for use in vector control to prevent disease	2009-11		20049114	2801202	10.1289/ehp.0900785	The Pine River statement: human health consequences of DDT use Costs and consequences of large-scale vector control for malaria Impact of artemisinin-based combination therapy and insecticide-treated nets on malaria burden in Zanzibar DDT and breast cancer in young women: new data on the significance of age at exposure A new classification system for the actions of IRS chemicals traditionally used for malaria control Dichlorodiphenyltrichloroethane (DDT): ubiquity, persistence, and risks Pesticides and breast cancer risk: a review of DDT, DDE, and dieldrin
An anaerobic-type alpha-ketoglutarate ferredoxin oxidoreductase completes the oxidative tricarboxylic acid cycle of Mycobacterium tuberculosis	scientific article	en:An anaerobic-type alpha-ketoglutarate ferredoxin oxidoreductase completes the oxidative tricarboxylic acid cycle of Mycobacterium tuberculosis	2009-11		19936047	2773412	10.1371/journal.ppat.1000662	Studies of a ring-cleaving dioxygenase illuminate the role of cholesterol metabolism in the pathogenesis of Mycobacterium tuberculosis Investigating the metabolic capabilities of Mycobacterium tuberculosis H37Rv using the in silico strain iNJ661 and proposing alternative drug targets Mycobacterium tuberculosis isocitrate lyases 1 and 2 are jointly required for in vivo growth and virulence Comprehensive identification of conditionally essential genes in mycobacteria Characterization of a fourth type of 2-keto acid-oxidizing enzyme from a hyperthermophilic archaeon: 2-ketoglutarate ferredoxin oxidoreductase from Thermococcus litoralis
Manganese exposure among smelting workers: relationship between blood manganese-iron ratio and early onset neurobehavioral alterations	scientific article	en:Manganese exposure among smelting workers: relationship between blood manganese-iron ratio and early onset neurobehavioral alterations	2009-11		19963104	3983997	10.1016/j.neuro.2009.02.005	Manganese exposure among smelting workers: blood manganese-iron ratio as a novel tool for manganese exposure assessment
Biomonitoring of organophosphorus agent exposure by reactivation of cholinesterase enzyme based on carbon nanotube-enhanced flow-injection amperometric detection	scientific article	en:Biomonitoring of organophosphorus agent exposure by reactivation of cholinesterase enzyme based on carbon nanotube-enhanced flow-injection amperometric detection	2009-11-15		19839597	2943389	10.1021/ac901673a	Magnetic electrochemical immunoassays with quantum dot labels for detection of phosphorylated acetylcholinesterase in plasma Use of biomarkers to indicate exposure of children to organophosphate pesticides: implications for a longitudinal study of children's environmental health
A cost of sexual attractiveness to high-fitness females	scientific article	en:A cost of sexual attractiveness to high-fitness females	2009-12		19997646	2780925	10.1371/journal.pbio.1000254	Twin intromittent organs of Drosophila for traumatic insemination
Nanoparticle inhalation impairs coronary microvascular reactivity via a local reactive oxygen species-dependent mechanism	scientific article	en:Nanoparticle inhalation impairs coronary microvascular reactivity via a local reactive oxygen species-dependent mechanism	2009-12-22		20033351	2825710	10.1007/s12012-009-9060-4	Nanoparticle inhalation impairs endothelium-dependent vasodilation in subepicardial arterioles Pulmonary nanoparticle exposure disrupts systemic microvascular nitric oxide signaling Pulmonary response to intratracheal instillation of ultrafine versus fine titanium dioxide: role of particle surface area Nanoparticle inhalation augments particle-dependent systemic microvascular dysfunction Systemic microvascular dysfunction and inflammation after pulmonary particulate matter exposure Particulate matter exposure impairs systemic microvascular endothelium-dependent dilation The asbestos cancer epidemic Concentrated ambient air particles induce vasoconstriction of small pulmonary arteries in rats Overexpression of human copper, zinc-superoxide dismutase (SOD1) prevents postischemic injury
The relationships of markers of cholesterol homeostasis with carotid intima-media thickness	scientific article	en:The relationships of markers of cholesterol homeostasis with carotid intima-media thickness	2010		20976107	2956704	10.1371/journal.pone.0013467	Controversial role of plant sterol esters in the management of hypercholesterolaemia Identification of a gene, ABCG5, important in the regulation of dietary cholesterol absorption Accumulation of dietary cholesterol in sitosterolemia caused by mutations in adjacent ABC transporters
Automatic vs. manual curation of a multi-source chemical dictionary: the impact on text mining	scientific article	en:Automatic vs. manual curation of a multi-source chemical dictionary: the impact on text mining	2010		20331846	2848622	10.1186/1758-2946-2-3	HMDB: a knowledgebase for the human metabolome DrugBank: a knowledgebase for drugs, drug actions and drug targets ChEBI: a database and ontology for chemical entities of biological interest From genomics to chemical genomics: new developments in KEGG
Ensembl variation resources	scientific article	en:Ensembl variation resources	2010		20459805	2894800	10.1186/1471-2164-11-293	Potential etiologic and functional implications of genome-wide association loci for human diseases and traits The UCSC Genome Browser Database: update 2009 Genome analysis of the platypus reveals unique signatures of evolution Ensembl 2008 A second generation human haplotype map of over 3.1 million SNPs Ensembl 2007 A haplotype map of the human genome A genetic variation map for chicken with 2.8 million single-nucleotide polymorphisms The Ensembl core software libraries HGVbase: a human sequence variation database emphasizing data quality and a broad spectrum of data sources dbSNP: the NCBI database of genetic variation
On the origin of Acochlidia and other enigmatic euthyneuran gastropods, with implications for the systematics of Heterobranchia	scientific article	en:On the origin of Acochlidia and other enigmatic euthyneuran gastropods, with implications for the systematics of Heterobranchia	2010		20973994	3087543	10.1186/1471-2148-10-323	Tiny but complex - interactive 3D visualization of the interstitial acochlidian gastropod Pseudunela cornuta (Challis, 1970) Evolution of gastropod mitochondrial genome arrangements From sea to land and beyond--new insights into the evolution of euthyneuran Gastropoda (Mollusca) Relaxed phylogenetics and dating with confidence Q24555823 MAFFT version 5: improvement in accuracy of multiple sequence alignment TREEFINDER: a powerful graphical analysis environment for molecular phylogenetics A phylogeny of the land snails (Gastropoda: Pulmonata)
A new herrerasaurid (Dinosauria, Saurischia) from the Upper Triassic Ischigualasto Formation of northwestern Argentina	scientific article	en:A new herrerasaurid (Dinosauria, Saurischia) from the Upper Triassic Ischigualasto Formation of northwestern Argentina	2010		21594020	3088398	10.3897/zookeys.63.550	A basal sauropodomorph (Dinosauria: Saurischia) from the Ischigualasto Formation (Triassic, Carnian) and the early evolution of Sauropodomorpha
Self-selected or mandated, open access increases citation impact for higher quality research	scientific article	en:Self-selected or mandated, open access increases citation impact for higher quality research	2010		20976155	2956678	10.1371/journal.pone.0013636	Open access to the scientific journal literature: situation 2009 A principal component analysis of 39 scientific impact measures Open access publishing, article downloads, and citations: randomised controlled trial Citation advantage of open access articles
The 'hidden' burden of malaria: cognitive impairment following infection	scientific article	en:The 'hidden' burden of malaria: cognitive impairment following infection	2010	infectious disease	21171998	3018393	10.1186/1475-2875-9-366	Cerebral malaria: mechanisms of brain injury and strategies for improved neurocognitive outcome Malarial retinopathy: a newly established diagnostic sign in severe malaria
Assessing the future threat from vivax malaria in the United Kingdom using two markedly different modelling approaches	scientific article	en:Assessing the future threat from vivax malaria in the United Kingdom using two markedly different modelling approaches	2010	infectious disease	20205713	2845590	10.1186/1475-2875-9-70	The global distribution of clinical episodes of Plasmodium falciparum malaria Risk factors for human disease emergence
Optimized high gradient magnetic separation for isolation of Plasmodium-infected red blood cells	scientific article	en:Optimized high gradient magnetic separation for isolation of Plasmodium-infected red blood cells	2010	infectious disease	20122252	2831011	10.1186/1475-2875-9-38	One-step concentration of malarial parasite-infected red blood cells and removal of contaminating white blood cells Cultivation of plasmodium spp
The position of mefloquine as a 21st century malaria chemoprophylaxis	scientific article	en:The position of mefloquine as a 21st century malaria chemoprophylaxis	2010	infectious disease	21143906	3224336	10.1186/1475-2875-9-357	Swedish traveller with Plasmodium knowlesi malaria after visiting Malaysian Borneo
Modelling knowlesi malaria transmission in humans: vector preference and host competence	scientific article	en:Modelling knowlesi malaria transmission in humans: vector preference and host competence	2010	infectious disease	21080968	2996403	10.1186/1475-2875-9-329	Modeling the effects of integrating larval habitat source reduction and insecticide treated nets for malaria control The genome of the simian and human malaria parasite Plasmodium knowlesi Plasmodium knowlesi malaria in humans is widely distributed and potentially life threatening Revisiting the basic reproductive number for malaria and its implications for malaria control
Successful field trial of attractive toxic sugar bait (ATSB) plant-spraying methods against malaria vectors in the Anopheles gambiae complex in Mali, West Africa	scientific article	en:Successful field trial of attractive toxic sugar bait (ATSB) plant-spraying methods against malaria vectors in the Anopheles gambiae complex in Mali, West Africa	2010	infectious disease	20663142	2914067	10.1186/1475-2875-9-210	How to make evolution-proof insecticides for malaria control Advantages of larval control for African malaria vectors: low mobility and behavioural responsiveness of immature mosquito stages allow high effective coverage
Complete mtDNA genomes of Anopheles darlingi and an approach to anopheline divergence time	scientific article	en:Complete mtDNA genomes of Anopheles darlingi and an approach to anopheline divergence time	2010	infectious disease	20470395	2877063	10.1186/1475-2875-9-127	Phylogenetic analysis and temporal diversification of mosquitoes (Diptera: Culicidae) based on nuclear genes and morphology Relaxed phylogenetics and dating with confidence The complete mitochondrial genome of the stomatopod crustacean Squilla mantis Genomic islands of speciation in Anopheles gambiae tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence
First case of detection of Plasmodium knowlesi in Spain by Real Time PCR in a traveller from Southeast Asia	scientific article	en:First case of detection of Plasmodium knowlesi in Spain by Real Time PCR in a traveller from Southeast Asia	2010	infectious disease	20663184	2921078	10.1186/1475-2875-9-219	Plasmodium knowlesi from archival blood films: further evidence that human infections are widely distributed and not newly emergent in Malaysian Borneo Swedish traveller with Plasmodium knowlesi malaria after visiting Malaysian Borneo Naturally acquired human Plasmodium knowlesi infection, Singapore Naturally acquired Plasmodium knowlesi malaria in human, Thailand Rapid diagnostic tests for malaria parasites
Improved methods for magnetic purification of malaria parasites and haemozoin	scientific article	en:Improved methods for magnetic purification of malaria parasites and haemozoin	2010	infectious disease	20074366	2817699	10.1186/1475-2875-9-17	One-step concentration of malarial parasite-infected red blood cells and removal of contaminating white blood cells The transcriptome of the intraerythrocytic developmental cycle of Plasmodium falciparum On the molecular mechanism of chloroquine's antimalarial action
Candidate malaria susceptibility/protective SNPs in hospital and population-based studies: the effect of sub-structuring	scientific article	en:Candidate malaria susceptibility/protective SNPs in hospital and population-based studies: the effect of sub-structuring	2010	infectious disease	20459687	2877684	10.1186/1475-2875-9-119	Genome-wide and fine-resolution association analysis of malaria in West Africa The genetic structure and history of Africans and African Americans Genetic variation and population structure in native Americans How malaria has affected the human genome and what human genetics can teach us about malaria
HIV-1 neutralization profile and plant-based recombinant expression of actinohivin, an Env glycan-specific lectin devoid of T-cell mitogenic activity	scientific article	en:HIV-1 neutralization profile and plant-based recombinant expression of actinohivin, an Env glycan-specific lectin devoid of T-cell mitogenic activity	2010	HIV	20559567	2886112	10.1371/journal.pone.0011143	A lectin isolated from bananas is a potent inhibitor of HIV replication Scaleable manufacture of HIV-1 entry inhibitor griffithsin and validation of its safety and efficacy as a topical microbicide component Differential N-linked glycosylation of human immunodeficiency virus and Ebola virus envelope glycoproteins modulates interactions with DC-SIGN and DC-SIGNR
Enhancing oral vaccine potency by targeting intestinal M cells	scientific article	en:Enhancing oral vaccine potency by targeting intestinal M cells	2010		21085599	2978714	10.1371/journal.ppat.1001147	Role of the glycocalyx in regulating access of microparticles to apical plasma membranes of intestinal epithelial cells: implications for microbial attachment and oral vaccine targeting
Paraneoplastic antigen Ma2 autoantibodies as specific blood biomarkers for detection of early recurrence of small intestine neuroendocrine tumors	scientific article	en:Paraneoplastic antigen Ma2 autoantibodies as specific blood biomarkers for detection of early recurrence of small intestine neuroendocrine tumors	2010		21209860	3012732	10.1371/journal.pone.0016010	MAP-1, a novel proapoptotic protein containing a BH3-like motif that associates with Bax through its Bcl-2 homology domains
Tissue distribution of 5-hydroxymethylcytosine and search for active demethylation intermediates	scientific article	en:Tissue distribution of 5-hydroxymethylcytosine and search for active demethylation intermediates	2010		21203455	3009720	10.1371/journal.pone.0015367	Sensitive enzymatic quantification of 5-hydroxymethylcytosine in genomic DNA Genome-wide reprogramming in the mouse germ line entails the base excision repair pathway Establishing, maintaining and modifying DNA methylation patterns in plants and animals The nuclear DNA base 5-hydroxymethylcytosine is present in Purkinje neurons and the brain Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1 Definitive identification of mammalian 5-hydroxymethyluracil DNA N-glycosylase activity as SMUG1
New basal iguanodonts from the Cedar Mountain formation of Utah and the evolution of thumb-spiked dinosaurs	scientific article	en:New basal iguanodonts from the Cedar Mountain formation of Utah and the evolution of thumb-spiked dinosaurs	2010		21124919	2989904	10.1371/journal.pone.0014075	First complete sauropod dinosaur skull from the Cretaceous of the Americas and the evolution of sauropod dentition
Congenital sensorineural deafness in Australian stumpy-tail cattle dogs is an autosomal recessive trait that maps to CFA10	scientific article	en:Congenital sensorineural deafness in Australian stumpy-tail cattle dogs is an autosomal recessive trait that maps to CFA10	2010		20967282	2953516	10.1371/journal.pone.0013364	Linkage and segregation analysis of black and brindle coat color in domestic dogs PedCheck: a program for identification of genotype incompatibilities in linkage analysis
Small-molecule antioxidant proteome-shields in Deinococcus radiodurans	scientific article	en:Small-molecule antioxidant proteome-shields in Deinococcus radiodurans	2010		20838443	2933237	10.1371/journal.pone.0012570	Protein oxidation implicated as the primary determinant of bacterial radioresistance Localization and role of manganese superoxide dismutase in a marine diatom Comparative genomics of Thermus thermophilus and Deinococcus radiodurans: divergent routes of adaptation to thermophily and radiation resistance Engineering Deinococcus geothermalis for bioremediation of high-temperature radioactive waste environments Evidence for a lack of DNA double-strand break repair in human cells exposed to very low x-ray doses Genome of the extremely radiation-resistant bacterium Deinococcus radiodurans viewed from the perspective of comparative genomics
The neurokinin 1 receptor antagonist, ezlopitant, reduces appetitive responding for sucrose and ethanol	scientific article	en:The neurokinin 1 receptor antagonist, ezlopitant, reduces appetitive responding for sucrose and ethanol	2010		20824145	2931709	10.1371/journal.pone.0012527	Neurokinin 1 receptors regulate morphine-induced endocytosis and desensitization of mu-opioid receptors in CNS neurons Evidence for sugar addiction: behavioral and neurochemical effects of intermittent, excessive sugar intake
New horned dinosaurs from Utah provide evidence for intracontinental dinosaur endemism	scientific article	en:New horned dinosaurs from Utah provide evidence for intracontinental dinosaur endemism	2010		20877459	2929175	10.1371/journal.pone.0012292	Dinosaurs, dragons, and dwarfs: the evolution of maximal body size
Population genetic analysis of Propionibacterium acnes identifies a subpopulation and epidemic clones associated with acne	scientific article	en:Population genetic analysis of Propionibacterium acnes identifies a subpopulation and epidemic clones associated with acne	2010		20808860	2924382	10.1371/journal.pone.0012277	Topographical and temporal diversity of the human skin microbiome Acne is not associated with yet-uncultured bacteria Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial "pan-genome" Multilocus sequence typing: a portable approach to the identification of clones within populations of pathogenic microorganisms
A census of marine biodiversity knowledge, resources, and future challenges	scientific article	en:A census of marine biodiversity knowledge, resources, and future challenges	2010		20689850	2914025	10.1371/journal.pone.0012110	Marine biodiversity in the Atlantic and Pacific coasts of South America: knowledge and gaps Status of biodiversity in the Baltic Sea Marine biodiversity in the Caribbean: regional estimates and distribution patterns An overview of marine biodiversity in United States waters Deep-sea biodiversity in the Mediterranean Sea: the known, the unknown, and the unknowable Marine biodiversity of Aotearoa New Zealand The biodiversity of the Mediterranean Sea: estimates, patterns, and threats Antarctic marine biodiversity--what do we know about the distribution of life in the Southern Ocean? Marine biodiversity in Japanese waters Rapid speciation in a newly opened postglacial marine environment, the Baltic Sea
Convergent evolution in aquatic tetrapods: insights from an exceptional fossil mosasaur	scientific article	en:Convergent evolution in aquatic tetrapods: insights from an exceptional fossil mosasaur	2010		20711249	2918493	10.1371/journal.pone.0011998	The colour of fossil feathers
Single particle tracking of alpha7 nicotinic AChR in hippocampal neurons reveals regulated confinement at glutamatergic and GABAergic perisynaptic sites	scientific article	en:Single particle tracking of alpha7 nicotinic AChR in hippocampal neurons reveals regulated confinement at glutamatergic and GABAergic perisynaptic sites	2010		20634896	2901346	10.1371/journal.pone.0011507	Multiple association states between glycine receptors and gephyrin identified by SPT analysis Homer regulates the association of group 1 metabotropic glutamate receptors with multivalent complexes of homer-related, synaptic proteins
A comprehensive phylogenetic analysis of the Scleractinia (Cnidaria, Anthozoa) based on mitochondrial CO1 sequence data	scientific article	en:A comprehensive phylogenetic analysis of the Scleractinia (Cnidaria, Anthozoa) based on mitochondrial CO1 sequence data	2010		20628613	2900217	10.1371/journal.pone.0011490	Mitochondrial and nuclear genes suggest that stony corals are monophyletic but most families of stony corals are not (Order Scleractinia, Class Anthozoa, Phylum Cnidaria)
Plant-mPLoc: a top-down strategy to augment the power for predicting plant protein subcellular localization	scientific article	en:Plant-mPLoc: a top-down strategy to augment the power for predicting plant protein subcellular localization	2010		20596258	2893129	10.1371/journal.pone.0011335	Structure and mechanism of the M2 proton channel of influenza A virus CDD: a conserved domain database for interactive domain family analysis The COG database: an updated version includes eukaryotes Gene ontology: tool for the unification of biology. The Gene Ontology Consortium
Bioprospecting finds the toughest biological material: extraordinary silk from a giant riverine orb spider	scientific article	en:Bioprospecting finds the toughest biological material: extraordinary silk from a giant riverine orb spider	2010		20856804	2939878	10.1371/journal.pone.0011234	Reconstructing web evolution and spider diversification in the molecular era
Multiple M. tuberculosis phenotypes in mouse and guinea pig lung tissue revealed by a dual-staining approach	scientific article	en:Multiple M. tuberculosis phenotypes in mouse and guinea pig lung tissue revealed by a dual-staining approach	2010		20559431	2885421	10.1371/journal.pone.0011108	Bacterial persistence: a model of survival in changing environments
Testing evolutionary and dispersion scenarios for the settlement of the new world	scientific article	en:Testing evolutionary and dispersion scenarios for the settlement of the new world	2010		20559441	2885431	10.1371/journal.pone.0011105	Genetic variation and population structure in native Americans Beringian standstill and spread of Native American founders The effect of ancient population bottlenecks on human phenotypic variation
Born knowing: tentacled snakes innately predict future prey behavior	scientific article	en:Born knowing: tentacled snakes innately predict future prey behavior	2010		20585384	2886828	10.1371/journal.pone.0010953	Worm grunting, fiddling, and charming--humans unknowingly mimic a predator to harvest bait
Do ravens show consolation? Responses to distressed others	scientific article	en:Do ravens show consolation? Responses to distressed others	2010		20485685	2868892	10.1371/journal.pone.0010605	Mirror-induced behavior in the magpie (Pica pica): evidence of self-recognition The monkey in the mirror: hardly a stranger
Evolutionary process of deep-sea bathymodiolus mussels	scientific article	en:Evolutionary process of deep-sea bathymodiolus mussels	2010		20436906	2860499	10.1371/journal.pone.0010363	Model selection and model averaging in phylogenetics: advantages of akaike information criterion and bayesian approaches over likelihood ratio tests Rapid evolution of animal mitochondrial DNA
Do pressures to publish increase scientists' bias? An empirical support from US States Data	scientific article	en:Do pressures to publish increase scientists' bias? An empirical support from US States Data	2010		20422014	2858206	10.1371/journal.pone.0010271	"Positive" results increase down the Hierarchy of the Sciences How many scientists fabricate and falsify research? A systematic review and meta-analysis of survey data Pharmaceutical industry sponsorship and research outcome and quality: systematic review
Tyrannobdella rex n. gen. n. sp. and the evolutionary origins of mucosal leech infestations	scientific article	en:Tyrannobdella rex n. gen. n. sp. and the evolutionary origins of mucosal leech infestations	2010		20418947	2854684	10.1371/journal.pone.0010057	Model selection and model averaging in phylogenetics: advantages of akaike information criterion and bayesian approaches over likelihood ratio tests MUSCLE: multiple sequence alignment with high accuracy and high throughput
PAX3 expression in normal skin melanocytes and melanocytic lesions (naevi and melanomas)	scientific article	en:PAX3 expression in normal skin melanocytes and melanocytic lesions (naevi and melanomas)	2010		20421967	2858648	10.1371/journal.pone.0009977	Transcriptional modulation of the anti-apoptotic protein BCL-XL by the paired box transcription factors PAX3 and PAX3/FKHR
Raltegravir is a potent inhibitor of XMRV, a virus implicated in prostate cancer and chronic fatigue syndrome	scientific article	en:Raltegravir is a potent inhibitor of XMRV, a virus implicated in prostate cancer and chronic fatigue syndrome	2010	prostate cancer	20376347	2848589	10.1371/journal.pone.0009948	Prevalence of xenotropic murine leukaemia virus-related virus in patients with chronic fatigue syndrome in the Netherlands: retrospective analysis of samples from an established cohort Absence of xenotropic murine leukaemia virus-related virus in UK patients with chronic fatigue syndrome Failure to detect the novel retrovirus XMRV in chronic fatigue syndrome Lack of evidence for xenotropic murine leukemia virus-related virus(XMRV) in German prostate cancer patients XMRV is present in malignant prostatic epithelium and is associated with prostate cancer, especially high-grade tumors Identification of a novel Gammaretrovirus in prostate tumors of patients homozygous for R462Q RNASEL variant Chronic fatigue syndrome
A new Basal sauropodomorph dinosaur from the Lower Jurassic Navajo sandstone of Southern Utah	scientific article	en:A new Basal sauropodomorph dinosaur from the Lower Jurassic Navajo sandstone of Southern Utah	2010		20352090	2844413	10.1371/journal.pone.0009789	A new transitional sauropodomorph dinosaur from the Early Jurassic of South Africa and the evolution of sauropod feeding and quadrupedalism A basal sauropodomorph (Dinosauria: Saurischia) from the Ischigualasto Formation (Triassic, Carnian) and the early evolution of Sauropodomorpha The earliest known sauropod dinosaur and the first steps towards sauropod locomotion
Laetoli footprints preserve earliest direct evidence of human-like bipedal biomechanics	scientific article	en:Laetoli footprints preserve earliest direct evidence of human-like bipedal biomechanics	2010		20339543	2842428	10.1371/journal.pone.0009769	Chimpanzee locomotor energetics and the origin of human bipedalism
The Alzheimer's disease-associated amyloid beta-protein is an antimicrobial peptide	scientific article	en:The Alzheimer's disease-associated amyloid beta-protein is an antimicrobial peptide	2010		20209079	2831066	10.1371/journal.pone.0009505	The major bactericidal activity of human seminal plasma is zinc-dependent and derived from fragmentation of the semenogelins BACE (beta-secretase) modulates the processing of APLP2 in vivo Apolipoprotein A-I directly interacts with amyloid precursor protein and inhibits A beta aggregation and toxicity The human gene FALL39 and processing of the cathelin precursor to the antibacterial peptide LL-37 in granulocytes Apolipoprotein E: high-avidity binding to beta-amyloid and increased frequency of type 4 allele in late-onset familial Alzheimer disease
The extent of the preserved feathers on the four-winged dinosaur Microraptor gui under ultraviolet light	scientific article	en:The extent of the preserved feathers on the four-winged dinosaur Microraptor gui under ultraviolet light	2010		20169153	2821398	10.1371/journal.pone.0009223	A new feather type in a nonavian theropod and the early evolution of feathers Biplane wing planform and flight performance of the feathered dinosaur Microraptor gui
Skeletal remains from Punic Carthage do not support systematic sacrifice of infants	scientific article	en:Skeletal remains from Punic Carthage do not support systematic sacrifice of infants	2010		20174667	2822869	10.1371/journal.pone.0009177	Rapid dental development in a Middle Paleolithic Belgian Neanderthal
THC Prevents MDMA Neurotoxicity in Mice	scientific article	en:THC Prevents MDMA Neurotoxicity in Mice	2010		20174577	2824821	10.1371/journal.pone.0009143	Crucial role of CB(2) cannabinoid receptor in the regulation of central immune responses during neuropathic pain CB2 receptors in the brain: role in central immune function Cannabinoid-induced mesenteric vasodilation through an endothelial site distinct from CB1 or CB2 receptors Cannabidiol and (-)Delta9-tetrahydrocannabinol are neuroprotective antioxidants
High prevalence of both humoral and cellular immunity to Zaire ebolavirus among rural populations in Gabon	scientific article	en:High prevalence of both humoral and cellular immunity to Zaire ebolavirus among rural populations in Gabon	2010		20161740	2817732	10.1371/journal.pone.0009126	Isolation of genetically diverse Marburg viruses from Egyptian fruit bats Mucosal immunization of cynomolgus macaques with the VSVDeltaG/ZEBOVGP vaccine stimulates strong ebola GP-specific immune responses Newly discovered ebola virus associated with hemorrhagic fever outbreak in Uganda Marburg virus infection detected in a common African bat Multiple Ebola Virus Transmission Events and Rapid Decline of Central African Wildlife Ebola haemorrhagic fever in Zaire, 1976
Psychedelics and the human receptorome	scientific article	en:Psychedelics and the human receptorome	2010		20126400	2814854	10.1371/journal.pone.0009019	Activity of opioid ligands in cells expressing cloned mu opioid receptors Salvinorin A: a potent naturally occurring nonnitrogenous kappa opioid selective agonist Psychotomimetic opiate receptors labeled and visualized with (+)-[3H]3-(3-hydroxyphenyl)-N-(1-propyl)piperidine
Altruism in forest chimpanzees: the case of adoption	scientific article	en:Altruism in forest chimpanzees: the case of adoption	2010		20111704	2811728	10.1371/journal.pone.0008901	Wild chimpanzees exchange meat for sex on a long-term basis
RNAa is conserved in mammalian cells	scientific article	en:RNAa is conserved in mammalian cells	2010		20107511	2809750	10.1371/journal.pone.0008848	MicroRNA-184 antagonizes microRNA-205 to maintain SHIP2 levels in epithelia Therapeutic RNAi targeting PCSK9 acutely lowers plasma cholesterol in rodents and LDL cholesterol in nonhuman primates Induced ncRNAs allosterically modify RNA-binding proteins in cis to inhibit transcription MicroRNA-373 induces expression of genes with complementary promoter sequences Small dsRNAs induce transcriptional activation in human cells
Global conservation significance of Ecuador's Yasuní National Park	scientific article	en:Global conservation significance of Ecuador's Yasuní National Park	2010		20098736	2808245	10.1371/journal.pone.0008767	Oil and gas projects in the Western Amazon: threats to wilderness, biodiversity, and indigenous peoples
Degraded carrageenan causing colitis in rats induces TNF secretion and ICAM-1 upregulation in monocytes through NF-kappaB activation	scientific article	en:Degraded carrageenan causing colitis in rats induces TNF secretion and ICAM-1 upregulation in monocytes through NF-kappaB activation	2010		20072622	2800179	10.1371/journal.pone.0008666	Carrageenan induces interleukin-8 production through distinct Bcl10 pathway in normal human colonic epithelial cells Review of harmful gastrointestinal effects of carrageenan in animal experiments I kappa B: a specific inhibitor of the NF-kappa B transcription factor
Failure to detect the novel retrovirus XMRV in chronic fatigue syndrome	scientific article	en:Failure to detect the novel retrovirus XMRV in chronic fatigue syndrome	2010		20066031	2795199	10.1371/journal.pone.0008519	Lack of evidence for xenotropic murine leukemia virus-related virus(XMRV) in German prostate cancer patients XMRV is present in malignant prostatic epithelium and is associated with prostate cancer, especially high-grade tumors A scientific journey through the 2-5A/RNase L system Identification of a novel Gammaretrovirus in prostate tumors of patients homozygous for R462Q RNASEL variant Retroviral sequences related to human T-lymphotropic virus type II in patients with chronic fatigue immune dysfunction syndrome
Genomic DNA sequences from mastodon and woolly mammoth reveal deep speciation of forest and savanna elephants	scientific article	en:Genomic DNA sequences from mastodon and woolly mammoth reveal deep speciation of forest and savanna elephants	2010		21203580	3006346	10.1371/journal.pbio.1000564	Complex phylogeographic history of central African forest elephants and its implications for taxonomy Patterns of damage in genomic DNA sequences from a Neandertal Proboscidean mitogenomics: chronology and mode of elephant evolution using mastodon as outgroup
Ancient DNA from European early neolithic farmers reveals their near eastern affinities	scientific article	en:Ancient DNA from European early neolithic farmers reveals their near eastern affinities	2010		21085689	2976717	10.1371/journal.pbio.1000536	A predominantly neolithic origin for European paternal lineages Y-chromosomal evidence of the cultural diffusion of agriculture in Southeast Europe New binary polymorphisms reshape and increase resolution of the human Y chromosomal haplogroup tree Two sources of the Russian patrilineal heritage in their Eurasian context The Genographic Project public participation mitochondrial DNA database Tracing the origin and spread of agriculture in Europe Model selection and model averaging in phylogenetics: advantages of akaike information criterion and bayesian approaches over likelihood ratio tests The molecular dissection of mtDNA haplogroup H confirms that the Franco-Cantabrian glacial refuge was a major source for the European gene pool Evidence for a genetic discontinuity between Neandertals and 24,000-year-old anatomically modern Europeans A signal, from human mtDNA, of postglacial recolonization in Europe Y-chromosomal diversity in Europe is clinal and influenced primarily by geography, rather than by language Tracing European founder lineages in the Near Eastern mtDNA pool Clines of nuclear DNA markers suggest a largely neolithic ancestry of the European gene pool Evidence for Paleolithic and Neolithic gene flow in Europe The retrieval of ancient human DNA sequences
Proteorhodopsin phototrophy promotes survival of marine bacteria during starvation	scientific article	en:Proteorhodopsin phototrophy promotes survival of marine bacteria during starvation	2010		20436956	2860489	10.1371/journal.pbio.1000358	IslandViewer: an integrated interface for computational identification and visualization of genomic islands Proteorhodopsin photosystem gene expression enables photophosphorylation in a heterologous host The Sorcerer II Global Ocean Sampling expedition: northwest Atlantic through eastern tropical Pacific New insights into metabolic properties of marine bacteria encoding proteorhodopsins Diversification and spectral tuning in marine proteorhodopsins
Persistence of tungsten oxide particle/fiber mixtures in artificial human lung fluids	scientific article	en:Persistence of tungsten oxide particle/fiber mixtures in artificial human lung fluids	2010		21126345	3012654	10.1186/1743-8977-7-38	Presence of tungsten-containing fibers in tungsten refining and manufacturing processes Unusual inflammatory and fibrogenic pulmonary responses to single-walled carbon nanotubes in mice
Concept of assessing nanoparticle hazards considering nanoparticle dosemetric and chemical/biological response metrics	scientific article	en:Concept of assessing nanoparticle hazards considering nanoparticle dosemetric and chemical/biological response metrics	2010		20155585	3884809	10.1080/15287390903489422	Meeting report: hazard assessment for nanoparticles--report from an interdisciplinary workshop Principles for characterizing the potential human health effects from exposure to nanomaterials: elements of a screening strategy Nanotoxicology: an emerging discipline evolving from studies of ultrafine particles
Male circumcision at different ages in Rwanda: a cost-effectiveness study	scientific article	en:Male circumcision at different ages in Rwanda: a cost-effectiveness study	2010-01	circumcision	20098721	2808207	10.1371/journal.pmed.1000211	Male circumcision and risk of syphilis, chancroid, and genital herpes: a systematic review and meta-analysis Randomized, controlled intervention trial of male circumcision for reduction of HIV infection risk: the ANRS 1265 Trial
Potential for occupational exposure to engineered carbon-based nanomaterials in environmental laboratory studies	scientific article	en:Potential for occupational exposure to engineered carbon-based nanomaterials in environmental laboratory studies	2010-01		20056572	2831966	10.1289/ehp.0901076	Inhalation vs. aspiration of single-walled carbon nanotubes in C57BL/6 mice: inflammation, fibrosis, oxidative stress, and mutagenesis
The changing disease-scape in the third epidemiological transition	Scientific Article about Malaria from International Journal of Environmental Research and Public Health	en:The changing disease-scape in the third epidemiological transition	2010-02		20616997	2872288	10.3390/ijerph7020675	On the origin of the treponematoses: a phylogenetic approach Rethinking McKeown The McKeown thesis: a historical controversy and its enduring influence Hay fever, hygiene, and household size
Ghostwriting at elite academic medical centers in the United States	scientific article	en:Ghostwriting at elite academic medical centers in the United States	2010-02		20126384	2814828	10.1371/journal.pmed.1000230	What should be done to tackle ghostwriting in the medical literature?
The global research neglect of unassisted smoking cessation: causes and consequences	scientific article	en:The global research neglect of unassisted smoking cessation: causes and consequences	2010-02		20161722	2817714	10.1371/journal.pmed.1000216	Factors associated with successful smoking cessation in the United States, 2000 Follow the money--the politics of embryonic stem cell research
Genome sequence of the pea aphid Acyrthosiphon pisum	scientific article	en:Genome sequence of the pea aphid Acyrthosiphon pisum	2010-02		20186266	2826372	10.1371/journal.pbio.1000313	PhylomeDB: a database for genome-wide collections of gene phylogenies Insights into social insects from the genome of the honeybee Apis mellifera Expansion of the BioCyc collection of pathway/genome databases to 160 genomes Combined evidence annotation of transposable elements in genome sequences MUSCLE: a multiple sequence alignment method with reduced time and space complexity MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
Diagnostic strategies using physical examination are minimally useful in defining carpal tunnel syndrome in population-based research studies	scientific article	en:Diagnostic strategies using physical examination are minimally useful in defining carpal tunnel syndrome in population-based research studies	2010-02		19854697	2877090	10.1136/oem.2009.047431	Physical examination has a low yield in screening for carpal tunnel syndrome Diagnostic tests 4: likelihood ratios Consensus criteria for the classification of carpal tunnel syndrome in epidemiologic studies
Present and future arboviral threats	scientific article	en:Present and future arboviral threats	2010-02		19857523	2815176	10.1016/j.antiviral.2009.10.008	Zika virus. I. Isolations and serological specificity
Anticancer peptide PNC-27 adopts an HDM-2-binding conformation and kills cancer cells by binding to HDM-2 in their membranes	scientific article	en:Anticancer peptide PNC-27 adopts an HDM-2-binding conformation and kills cancer cells by binding to HDM-2 in their membranes	2010-02-02		20080680	2836618	10.1073/pnas.0909364107	Peptides from the amino terminal mdm-2-binding domain of p53, designed from conformational analysis, are selectively cytotoxic to transformed cells Structure of the MDM2 oncoprotein bound to the p53 tumor suppressor transactivation domain
Astrogliosis in CNS pathologies: is there a role for microglia?	scientific article	en:Astrogliosis in CNS pathologies: is there a role for microglia?	2010-02-12		20148316	3629545	10.1007/s12035-010-8098-4	Molecular dissection of reactive astrogliosis and glial scar formation Astrocytes promote myelination in response to electrical impulses Role of microglia in central nervous system infections
Rapid evolution of pandemic noroviruses of the GII.4 lineage	scientific article	en:Rapid evolution of pandemic noroviruses of the GII.4 lineage	2010-03		20360972	2847951	10.1371/journal.ppat.1000831	Structural basis for the recognition of blood group trisaccharides by norovirus Comparison of the mutation rates of human influenza A and B viruses Evolution of mutational robustness in an RNA virus Increased fidelity reduces poliovirus fitness and virulence under selective pressure in mice Cellular and humoral immunity following Snow Mountain virus challenge Replicative homeostasis: a fundamental mechanism mediating selective viral replication and escape mutation The P domain of norovirus capsid protein forms dimer and binds to histo-blood group antigen receptors The evolution of human influenza viruses Rates of spontaneous mutation among RNA viruses
Getting started in gene orthology and functional analysis	scientific article	en:Getting started in gene orthology and functional analysis	2010-03		20361041	2845645	10.1371/journal.pcbi.1000703	EnsemblCompara GeneTrees: Complete, duplication-aware phylogenetic trees in vertebrates SMART 6: recent updates and new developments The Pfam protein families database PhylomeDB: a database for genome-wide collections of gene phylogenies The COG database: an updated version includes eukaryotes ExPASy: The proteomics server for in-depth protein knowledge and analysis Gene ontology: tool for the unification of biology. The Gene Ontology Consortium The use of gene clusters to infer functional coupling
Spatial epigenetic control of mono- and bistable gene expression	scientific article	en:Spatial epigenetic control of mono- and bistable gene expression	2010-03		20305717	2838748	10.1371/journal.pbio.1000332	Stochastic mRNA synthesis in mammalian cells Positive feedback in eukaryotic gene networks: cell differentiation by graded to binary response conversion
Initial genomics of the human nucleolus	scientific article	en:Initial genomics of the human nucleolus	2010-03		20361057	2845662	10.1371/journal.pgen.1000889	Nuclear neighborhoods and gene expression Global analysis of the insulator binding protein CTCF in chromatin barrier regions reveals demarcation of active and repressive domains Combinatorial patterns of histone acetylations and methylations in the human genome Nucleolus: the fascinating nuclear body Centromere RNA is a key component for the assembly of nucleoproteins at the nucleolus and centromere Characterization of the nucleolar gene product, treacle, in Treacher Collins syndrome The fragile X-related proteins FXR1P and FXR2P contain a functional nucleolar-targeting signal equivalent to the HIV-1 regulatory proteins Nuclear structure in normal and Bloom syndrome cells Dyskerin localizes to the nucleolus and its mislocalization is unlikely to play a role in the pathogenesis of dyskeratosis congenita Nucleolar localization of the Werner syndrome protein in human cells
Prediction of co-receptor usage of HIV-1 from genotype	scientific article	en:Prediction of co-receptor usage of HIV-1 from genotype	2010-04	HIV	20419152	2855328	10.1371/journal.pcbi.1000743	Genome sequencing in microfabricated high-density picolitre reactors Electrostatics of nanosystems: application to microtubules and the ribosome
Urinary bisphenol A concentrations and ovarian response among women undergoing IVF	scientific article	en:Urinary bisphenol A concentrations and ovarian response among women undergoing IVF	2010-04	reproductive medicine	20002217	3089904	10.1111/j.1365-2605.2009.01014.x	Temporal variability and predictors of urinary bisphenol A concentrations in men and women Exposure of the U.S. population to bisphenol A and 4-tertiary-octylphenol: 2003-2004 Chapel Hill bisphenol A expert panel consensus statement: integration of mechanisms, effects in animals and potential to impact human health at current levels of exposure Parent bisphenol A accumulation in the human maternal-fetal-placental unit
Most "dark matter" transcripts are associated with known genes	scientific article	en:Most "dark matter" transcripts are associated with known genes	2010-05		20502517	2872640	10.1371/journal.pbio.1000371	The genetic signatures of noncoding RNAs TopHat: discovering splice junctions with RNA-Seq Ultrafast and memory-efficient alignment of short DNA sequences to the human genome RNA exosome depletion reveals transcription upstream of active human promoters RNA-Seq: a revolutionary tool for transcriptomics The transcriptional landscape of the yeast genome defined by RNA sequencing Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project Polyadenylation of ribosomal RNA in human cells Identification and classification of conserved RNA secondary structures in the human genome Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes Bioconductor: open software development for computational biology and bioinformatics A comprehensive transcript index of the human genome generated using microarrays and computational approaches Novel RNAs identified from an in-depth analysis of the transcriptome of human chromosomes 21 and 22 The transcriptional activity of human Chromosome 22 BLAT--the BLAST-like alignment tool The "beta-like-globin" gene domain in human erythroid cells
Stressors among Latino day laborers. A pilot study examining allostatic load	scientific article	en:Stressors among Latino day laborers. A pilot study examining allostatic load	2010-05		20507008	2964275	10.3928/08910162-20100428-01	The Occupational Health of Southeast Asians in Lowell: A Descriptive Study
Gendered Challenge, Gendered Response: Confronting the Ideal Worker Norm in a White-Collar Organization	scientific article	en:Gendered Challenge, Gendered Response: Confronting the Ideal Worker Norm in a White-Collar Organization	2010-05-01	gender studies	20625518	2900795	10.1177/0891243210372073	Work, family and life-course fit: Does control over work time matter?
Biodiversity assessment of the fishes of Saba Bank atoll, Netherlands Antilles	scholarly article by Williams, Jeffrey et al., 2010	en:Biodiversity Assessment of the Fishes of Saba Bank Atoll, Netherlands Antilles	2010-05-21	biodiversity fish Saba Bank	20505760	2873961	10.1371/journal.pone.0010676	Reef fishes of Saba Bank, Netherlands Antilles: assemblage structure across a gradient of habitat types
Estimating the global clinical burden of Plasmodium falciparum malaria in 2007	scientific article about malaria from PLoS Medicine	en:Estimating the global clinical burden of Plasmodium falciparum malaria in 2007	2010-06	malaria	20563310	2885984	10.1371/journal.pmed.1000290	Hidden burden of malaria in Indian women The accuracy of clinical malaria case reporting at primary health care facilities in Honiara, Solomon Islands A world malaria map: Plasmodium falciparum endemicity in 2007 The limits and intensity of Plasmodium falciparum transmission: implications for malaria control and elimination worldwide The co-distribution of Plasmodium falciparum and hookworm among African schoolchildren An immeasurable crisis? A criticism of the millennium development goals and why they cannot be measured Clustered local transmission and asymptomatic Plasmodium falciparum and Plasmodium vivax malaria infections in a recently emerged, hypoendemic Peruvian Amazon community The global distribution of clinical episodes of Plasmodium falciparum malaria Analysing the quality of routine malaria data in Mozambique Evolutionary and historical aspects of the burden of malaria
Evidence that adaptation in Drosophila is not limited by mutation at single sites	scientific article	en:Evidence that adaptation in Drosophila is not limited by mutation at single sites	2010-06		20585551	2887467	10.1371/journal.pgen.1000924	The role of geography in human adaptation Population genomics: whole-genome analysis of polymorphism and divergence in Drosophila simulans Evidence of still-ongoing convergence evolution of the lactase persistence T-13910 alleles in humans Soft sweeps: molecular population genetics of adaptation from standing genetic variation Mutations of acetylcholinesterase which confer insecticide resistance in Drosophila melanogaster populations Acetylcholinesterase alterations reveal the fitness cost of mutations conferring insecticide resistance The probability of fixation in populations of changing size Evolution of hybrid dysgenesis determinants in Drosophila melanogaster
Sharing health data: good intentions are not enough	scientific article	en:Sharing health data: good intentions are not enough	2010-06		20539861	2878150	10.2471/BLT.09.074393	Data sharing in genomics--re-shaping scientific practice The effects of excluding patients from the analysis in randomised controlled trials: meta-epidemiological study Missing data in randomized clinical trials for weight loss: scope of the problem, state of the field, and performance of statistical methods Should data from demographic surveillance systems be made more widely available to researchers? Megascience. 'Omics data sharing Informed consent in the genomics era Resolving individuals contributing trace amounts of DNA to highly complex mixtures using high-density SNP genotyping microarrays Time for fair trade in research data How to encourage the right behaviour Data's shameful neglect Next stop, don't block the doors: opening up access to clinical trials results
Increased endothelial exocytosis and generation of endothelin-1 contributes to constriction of aged arteries	scientific article	en:Increased endothelial exocytosis and generation of endothelin-1 contributes to constriction of aged arteries	2010-07-23		20522806	2909353	10.1161/CIRCRESAHA.109.210229	Increased Oxidant Activity Mediates Vascular Dysfunction in Vibration Injury Rab3D and annexin A2 play a role in regulated secretion of vWF, but not tPA, from endothelial cells Human endothelial cell storage granules: a novel intracellular site for isoforms of the endothelin-converting enzyme Endothelin-converting enzyme: ultrastructural localization and its recycling from the cell surface
Asbestos fibre dimensions and lung cancer mortality among workers exposed to chrysotile	scientific article	en:Asbestos fibre dimensions and lung cancer mortality among workers exposed to chrysotile	2010-09		19897464	2975987	10.1136/oem.2009.050120	Lung cancer mortality and fibre exposures among North Carolina asbestos textile workers Estimates of historical exposures by phase contrast and transmission electron microscopy in North Carolina USA asbestos textile plants An epidemiological study of the role of chrysotile asbestos fibre dimensions in determining respiratory disease risk in exposed workers Development of a fibre size-specific job-exposure matrix for airborne asbestos fibres Follow-up study of chrysotile textile workers: cohort mortality and exposure-response
Evidence of selection upon genomic GC-content in bacteria	scientific article	en:Evidence of selection upon genomic GC-content in bacteria	2010-09		20838593	2936529	10.1371/journal.pgen.1001107	Environments shape the nucleotide composition of genomes
Cerebral malaria: mechanisms of brain injury and strategies for improved neurocognitive outcome	scientific article	en:Cerebral malaria: mechanisms of brain injury and strategies for improved neurocognitive outcome	2010-10	malaria	20606600	3056312	10.1203/PDR.0b013e3181eee738	Glatiramer acetate reduces the risk for experimental cerebral malaria: a pilot study Malarial retinopathy: a newly established diagnostic sign in severe malaria The global distribution of clinical episodes of Plasmodium falciparum malaria
Research recommendations for selected IARC-classified agents	scientific article	en:Research recommendations for selected IARC-classified agents	2010-10		20562050	2957912	10.1289/ehp.0901828	Surface area of particle administered versus mass in determining the pulmonary toxicity of ultrafine and fine carbon black: comparison to ultrafine titanium dioxide Increased frequency of chromosome translocations in airline pilots with long-term flying experience Pulmonary response to intratracheal instillation of ultrafine versus fine titanium dioxide: role of particle surface area Pulmonary inflammation and tumor induction in lung tumor susceptible A/J and resistant C57BL/6J mice exposed to welding fume Biological exposure assessment to tetrachloroethylene for workers in the dry cleaning industry Meeting report: the role of environmental lighting and circadian disruption in cancer and other diseases Mortality and exposure response among 14,458 electrical capacitor manufacturing workers exposed to polychlorinated biphenyls (PCBs) Mortality among workers exposed to polychlorinated biphenyls (PCBs) in an electrical capacitor manufacturing plant in Indiana: an update Ultrafine particles cross cellular membranes by nonphagocytic mechanisms in lungs and in cultured cells Serum organochlorine levels and breast cancer: a nested case-control study of Norwegian women
Annotated checklist of the recent and extinct pythons (Serpentes, Pythonidae), with notes on nomenclature, taxonomy, and distribution	scientific article	en:Annotated checklist of the recent and extinct pythons (Serpentes, Pythonidae), with notes on nomenclature, taxonomy, and distribution	2010-11-04	snake Pythonidae	21594030	3088416	10.3897/zookeys.66.683	Claims of potential expansion throughout the U.S. by invasive python species are contradicted by ecological niche models
Advances and challenges in malaria vaccine development	scientific article	en:Advances and challenges in malaria vaccine development	2010-12	malaria	21123952	2994342	10.1172/JCI44423	Structure of the Plasmodium falciparum circumsporozoite protein, a leading malaria vaccine candidate Efficacy of RTS,S/AS01E vaccine against malaria in children 5 to 17 months of age A malaria vaccine that elicits in humans antibodies able to kill Plasmodium falciparum The global distribution of clinical episodes of Plasmodium falciparum malaria Genome sequence of the human malaria parasite Plasmodium falciparum
Organophosphate pesticide exposure and attention in young Mexican-American children: the CHAMACOS study	scientific article	en:Organophosphate pesticide exposure and attention in young Mexican-American children: the CHAMACOS study	2010-12		21126939	3002198	10.1289/ehp.1002056	Attention-deficit/hyperactivity disorder and urinary metabolites of organophosphate pesticides Organophosphate pesticide exposure and neurodevelopment in young Mexican-American children Organophosphate urinary metabolite levels during pregnancy and after delivery in women living in an agricultural community Assessing exposure to organophosphorus pesticides by biomonitoring in epidemiologic studies of birth outcomes Association of in utero organophosphate pesticide exposure and fetal growth and length of gestation in an agricultural population
Pre-calculated protein structure alignments at the RCSB PDB website	scientific article	en:Pre-calculated protein structure alignments at the RCSB PDB website	2010-12-01		20937596	3003546	10.1093/bioinformatics/btq572	BioJava: an open-source framework for bioinformatics SISYPHUS--structural alignments for proteins with non-trivial relationships TM-align: a protein structure alignment algorithm based on the TM-score FATCAT: a web server for flexible structure comparison and structure similarity searching The Protein Data Bank
Arginase activities and global arginine bioavailability in wild-type and ApoE-deficient mice: responses to high fat and high cholesterol diets	scientific article	en:Arginase activities and global arginine bioavailability in wild-type and ApoE-deficient mice: responses to high fat and high cholesterol diets	2010-12-06		21151916	2997799	10.1371/journal.pone.0015253	Cardiovascular effects of pulmonary exposure to single-wall carbon nanotubes Arginine metabolism: nitric oxide and beyond
Quinine, an old anti-malarial drug in a modern world: role in the treatment of malaria	Academic review article discussing the merits of Quinine	en:Quinine, an old anti-malarial drug in a modern world: role in the treatment of malaria	2011	infectious disease	21609473	3121651	10.1186/1475-2875-10-144	Artesunate versus quinine in the treatment of severe falciparum malaria in African children (AQUAMAT): an open-label, randomised trial Safety and efficacy of rectal compared with intramuscular quinine for the early treatment of moderately severe malaria in children: randomised clinical trial Clindamycin as an antimalarial drug: review of clinical trials
A new world malaria map: Plasmodium falciparum endemicity in 2010	Scientific Article about Malaria from Malaria Journal	en:A new world malaria map: Plasmodium falciparum endemicity in 2010	2011	infectious disease	22185615	3274487	10.1186/1475-2875-10-378	Molecular malaria epidemiology: mapping and burden estimates for the Democratic Republic of the Congo, 2007 The international limits and population at risk of Plasmodium vivax transmission in 2009 Climate change and the global malaria recession A world malaria map: Plasmodium falciparum endemicity in 2007 The limits and intensity of Plasmodium falciparum transmission: implications for malaria control and elimination worldwide Revisiting the basic reproductive number for malaria and its implications for malaria control Assembling a global database of malaria parasite prevalence for the Malaria Atlas Project The malaria Atlas Project: developing global maps of malaria risk
Systematic review and meta-analysis: rapid diagnostic tests versus placental histology, microscopy and PCR for malaria in pregnant women	Scientific Article about Malaria from Malaria Journal	en:Systematic review and meta-analysis: rapid diagnostic tests versus placental histology, microscopy and PCR for malaria in pregnant women	2011	infectious disease	22035448	3228868	10.1186/1475-2875-10-321	The development of QUADAS: a tool for the quality assessment of studies of diagnostic accuracy included in systematic reviews
Determinants of relapse periodicity in Plasmodium vivax malaria	Scientific Article about Malaria from Malaria Journal	en:Determinants of relapse periodicity in Plasmodium vivax malaria	2011	infectious disease	21989376	3228849	10.1186/1475-2875-10-297	Experimental Malaria: Recurrence after Nine Months Comparative genomics of the neglected human malaria parasite Plasmodium vivax Endemic malaria: an 'indoor' disease in northern Europe. Historical data analysed Antimalarial drug resistance Therapeutic responses to different antimalarial drugs in vivax malaria Feeding behaviour and sporozoite ejection by infected Anopheles stephensi The hypnozoite and relapse in primate malaria
Creative Commons licenses and the non-commercial condition: Implications for the re-use of biodiversity information	academic article	en:Creative Commons licenses and the non-commercial condition: Implications for the re-use of biodiversity information	2011		22207810	3234435	10.3897/zookeys.150.2189	Biodiversity information platforms: From standards to interoperability Scratchpads 2.0: a Virtual Research Environment supporting scholarly collaboration, communication and data publication in biodiversity science Open access to the scientific journal literature: situation 2009 Taxonomic information exchange and copyright: the Plazi approach Open access: taking full advantage of the content When is open access not open access?
Anatomy and taxonomic status of the chasmosaurine ceratopsid Nedoceratops hatcheri from the upper Cretaceous Lance Formation of Wyoming, U.S.A	research article	en:Anatomy and taxonomic status of the chasmosaurine ceratopsid Nedoceratops hatcheri from the upper Cretaceous Lance Formation of Wyoming, U.S.A	2011	Nedoceratops hatcheri Lance Formation	21283763	3024410	10.1371/journal.pone.0016196	New horned dinosaurs from Utah provide evidence for intracontinental dinosaur endemism Major cranial changes during Triceratops ontogeny
A computational analysis of limb and body dimensions in Tyrannosaurus rex with implications for locomotion, ontogeny, and growth	scientific article	en:A computational analysis of limb and body dimensions in Tyrannosaurus rex with implications for locomotion, ontogeny, and growth	2011		22022500	3192160	10.1371/journal.pone.0026037	Was dinosaurian physiology inherited by birds? Reconciling slow growth in archaeopteryx Estimating mass properties of dinosaurs using laser imaging and 3D computer modelling Estimating dinosaur maximum running speeds using evolutionary robotics Tyrannosaur ageing Age and growth dynamics of Tyrannosaurus rex
The giant Cafeteria roenbergensis virus that infects a widespread marine phagocytic protist is a new member of the fourth domain of Life	scientific article	en:The giant Cafeteria roenbergensis virus that infects a widespread marine phagocytic protist is a new member of the fourth domain of Life	2011		21559486	3084725	10.1371/journal.pone.0018935	Giant virus with a remarkable complement of genes infects marine zooplankton DNA viruses: the really big ones (giruses) Eukaryotic large nucleo-cytoplasmic DNA viruses: clusters of orthologous genes and reconstruction of viral genome evolution Giant Marseillevirus highlights the role of amoebae as a melting pot in emergence of chimeric microorganisms GeneMark: web software for gene finding in prokaryotes, eukaryotes and viruses MUSCLE: a multiple sequence alignment method with reduced time and space complexity Common origin of four diverse families of large eukaryotic DNA viruses The COG database: new developments in phylogenetic classification of proteins from complete genomes Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
Identification of novel functional inhibitors of acid sphingomyelinase	scientific article	en:Identification of novel functional inhibitors of acid sphingomyelinase	2011		21909365	3166082	10.1371/journal.pone.0023852	Quantitative modeling of selective lysosomal targeting for drug design The complex life of simple sphingolipids
Outcomes of the 2011 Botanical Nomenclature Section at the XVIII International Botanical Congress	scientific article	en:Outcomes of the 2011 Botanical Nomenclature Section at the XVIII International Botanical Congress	2011		22171188	3174450	10.3897/phytokeys.5.1850	Fast, linked, and open - the future of taxonomic publishing for plants: launching the journal PhytoKeys
Candidate glutamatergic neurons in the visual system of Drosophila	scientific article	en:Candidate glutamatergic neurons in the visual system of Drosophila	2011		21573163	3088675	10.1371/journal.pone.0019472	Refined spatial manipulation of neuronal function by combinatorial restriction of transgene expression Cholinergic and GABAergic pathways in fly motion vision
Cross fostering experiments suggest that mice songs are innate	scientific article	en:Cross fostering experiments suggest that mice songs are innate	2011		21408017	3052373	10.1371/journal.pone.0017721	Abnormal behavior in a chromosome-engineered mouse model for human 15q11-13 duplication seen in autism Ultrasonic songs of male mice Altered ultrasonic vocalization in mice with a disruption in the Foxp2 gene
Characterization of bioactive recombinant human lysozyme expressed in milk of cloned transgenic cattle	scientific article	en:Characterization of bioactive recombinant human lysozyme expressed in milk of cloned transgenic cattle	2011		21436886	3059212	10.1371/journal.pone.0017593	Meat and milk compositions of bovine clones
Revision of the Southeast Asian millipede genus Orthomorpha Bollman, 1893, with the proposal of a new genus (Diplopoda, Polydesmida, Paradoxosomatidae)	scientific article	en:Revision of the Southeast Asian millipede genus Orthomorpha Bollman, 1893, with the proposal of a new genus (Diplopoda, Polydesmida, Paradoxosomatidae)	2011		22140329	3208436	10.3897/zookeys.131.1921	Review of the millipede genus Eutrichodesmus Silvestri, 1910, in China, with descriptions of new cavernicolous species (Diplopoda, Polydesmida, Haplodesmidae) Semantic tagging of and semantic enhancements to systematics papers: ZooKeys working examples A review of the millipede genus Sinocallipus Zhang, 1993 (Diplopoda, Callipodida, Sinocallipodidae), with notes on gonopods monotony vs. peripheral diversity in millipedes Interlinking journal and wiki publications through joint citation: Working examples from ZooKeys and Plazi on Species-ID Review of the genus Tylopus Jeekel, 1968, with descriptions of five new species from Thailand (Diplopoda, Polydesmida, Paradoxosomatidae)
Individual differences in sound-in-noise perception are related to the strength of short-latency neural responses to noise	scientific article	en:Individual differences in sound-in-noise perception are related to the strength of short-latency neural responses to noise	2011		21387016	3046163	10.1371/journal.pone.0017266	Updating P300: an integrative theory of P3a and P3b
Towards resolving the complete fern tree of life	scientific article	en:Towards resolving the complete fern tree of life	2011		22022365	3192703	10.1371/journal.pone.0024851	Mega-phylogeny approach for comparative biology: an alternative to supertree and supermatrix approaches MUSCLE: multiple sequence alignment with high accuracy and high throughput
A revised nomenclature for transcribed human endogenous retroviral loci	scientific article	en:A revised nomenclature for transcribed human endogenous retroviral loci	2011		21542922	3113919	10.1186/1759-8753-2-7	Ensembl 2011 Analysis of transcribed human endogenous retrovirus W env loci clarifies the origin of multiple sclerosis-associated retrovirus env sequences Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project Comprehensive search for intra- and inter-specific sequence polymorphisms among coding envelope genes of retroviral origin found in the human genome: genes and pseudogenes Comprehensive analysis of human endogenous retrovirus transcriptional activity in human tissues with a retrovirus-specific microarray Identification of endogenous retroviral reading frames in the human genome Genomewide screening for fusogenic human endogenous retrovirus envelopes identifies syncytin 2, a gene conserved on primate evolution Survey of human genes of retroviral origin: identification and transcriptome of the genes with coding capacity for complete envelope proteins Initial sequencing and analysis of the human genome Syncytin is a captive retroviral envelope protein involved in human placental morphogenesis Genome-wide screening, cloning, chromosomal assignment, and expression of full-length human endogenous retrovirus type K Identification of an active reverse transcriptase enzyme encoded by a human endogenous HERV-K retrovirus Molecular characterization and placental expression of HERV-W, a new human endogenous retrovirus family
Whole plant extracts versus single compounds for the treatment of malaria: synergy and positive interactions	scientific article	en:Whole plant extracts versus single compounds for the treatment of malaria: synergy and positive interactions	2011	infectious disease	21411015	3059462	10.1186/1475-2875-10-S1-S4	Artemisia annua as a herbal tea for malaria The relationship of physico-chemical properties and structure to the differential antiplasmodial activity of the cinchona alkaloids A mechanism for the synergistic antimalarial action of atovaquone and proguanil
Parasitostatic effect of maslinic acid. I. Growth arrest of Plasmodium falciparum intraerythrocytic stages	scientific article	en:Parasitostatic effect of maslinic acid. I. Growth arrest of Plasmodium falciparum intraerythrocytic stages	2011	infectious disease	21477369	3087696	10.1186/1475-2875-10-82	Expression profiling of the schizont and trophozoite stages of Plasmodium falciparum with a long-oligonucleotide microarray
Review of the clinical pharmacokinetics of artesunate and its active metabolite dihydroartemisinin following intravenous, intramuscular, oral or rectal administration	scientific article	en:Review of the clinical pharmacokinetics of artesunate and its active metabolite dihydroartemisinin following intravenous, intramuscular, oral or rectal administration	2011	infectious disease	21914160	3180444	10.1186/1475-2875-10-263	New fixed-dose artesunate-mefloquine formulation against multidrug-resistant Plasmodium falciparum in adults: a comparative phase IIb safety and pharmacokinetic study with standard-dose nonfixed artesunate plus mefloquine Pharmacokinetics of artesunate after single oral administration to rats
Alternative splicing of the Anopheles gambiae Dscam gene in diverse Plasmodium falciparum infections	scientific article	en:Alternative splicing of the Anopheles gambiae Dscam gene in diverse Plasmodium falciparum infections	2011	infectious disease	21651790	3118162	10.1186/1475-2875-10-156	AgDscam, a hypervariable immunoglobulin domain-containing receptor of the Anopheles gambiae innate immune system Toll-like receptor signalling
Innovative public-private partnerships to maximize the delivery of anti-malarial medicines: lessons learned from the ASAQ Winthrop experience	scientific article	en:Innovative public-private partnerships to maximize the delivery of anti-malarial medicines: lessons learned from the ASAQ Winthrop experience	2011	infectious disease	21605364	3117751	10.1186/1475-2875-10-143	The initial pharmaceutical development of an artesunate/amodiaquine oral formulation for the treatment of malaria: a public-private partnership Randomized, multicentre assessment of the efficacy and safety of ASAQ--a fixed-dose artesunate-amodiaquine combination therapy in the treatment of uncomplicated Plasmodium falciparum malaria
A "reverse pharmacology" approach for developing an anti-malarial phytomedicine	scientific article	en:A "reverse pharmacology" approach for developing an anti-malarial phytomedicine	2011	infectious disease	21411019	3059466	10.1186/1475-2875-10-S1-S8	Traditional herbal medicines for malaria
Vivax malaria in Mauritania includes infection of a Duffy-negative individual	scientific article	en:Vivax malaria in Mauritania includes infection of a Duffy-negative individual	2011	infectious disease	22050867	3228859	10.1186/1475-2875-10-336	Duffy negative antigen is no longer a barrier to Plasmodium vivax--molecular evidences from the African West Coast (Angola and Equatorial Guinea) The global distribution of the Duffy blood group The international limits and population at risk of Plasmodium vivax transmission in 2009 Plasmodium vivax clinical malaria is commonly observed in Duffy-negative Malagasy people Duffy antigen receptor for chemokines mediates trans-infection of HIV-1 from red blood cells to target cells and affects HIV-AIDS susceptibility Duffy blood group gene polymorphisms among malaria vivax patients in four areas of the Brazilian Amazon region Emergence of FY*A(null) in a Plasmodium vivax-endemic region of Papua New Guinea Cloning of glycoprotein D cDNA, which encodes the major subunit of the Duffy blood group system and the receptor for the Plasmodium vivax malaria parasite Postcapillary venule endothelial cells in kidney express a multispecific chemokine receptor that is structurally and functionally identical to the erythroid isoform, which is the Duffy blood group antigen The Duffy antigen/receptor for chemokines (DARC) is expressed in endothelial cells of Duffy negative individuals who lack the erythrocyte receptor A receptor for the malarial parasite Plasmodium vivax: the erythrocyte chemokine receptor Functional and biochemical analysis of the cloned Duffy antigen: identity with the red blood cell chemokine receptor
Mapping hypoendemic, seasonal malaria in rural Bandarban, Bangladesh: a prospective surveillance	scientific article	en:Mapping hypoendemic, seasonal malaria in rural Bandarban, Bangladesh: a prospective surveillance	2011	infectious disease	21569599	3112456	10.1186/1475-2875-10-124	Indigenous Plasmodium ovale malaria in Bangladesh Assembling a global database of malaria parasite prevalence for the Malaria Atlas Project
Prevalence of kidney disease in HIV-infected and uninfected Rwandan women	scientific article	en:Prevalence of kidney disease in HIV-infected and uninfected Rwandan women	2011	HIV	21464937	3065469	10.1371/journal.pone.0018352	Association of trypanolytic ApoL1 variants with kidney disease in African Americans A new equation to estimate glomerular filtration rate MYH9 is a major-effect risk gene for focal segmental glomerulosclerosis MYH9 is associated with nondiabetic end-stage renal disease in African Americans
Multiple ATR-Chk1 pathway proteins preferentially associate with checkpoint-inducing DNA substrates	scientific article	en:Multiple ATR-Chk1 pathway proteins preferentially associate with checkpoint-inducing DNA substrates	2011		21829571	3146532	10.1371/journal.pone.0022986	Characterization of functional domains in human Claspin An alternative form of replication protein a expressed in normal human tissues supports DNA repair The human Tim/Tipin complex coordinates an Intra-S checkpoint response to UV that slows replication fork displacement ATR kinase activation mediated by MutSalpha and MutLalpha in response to cytotoxic O6-methylguanine adducts Functional uncoupling of MCM helicase and DNA polymerase activities activates the ATR-dependent checkpoint Coupling of human circadian and cell cycles by the timeless protein ATRIP binding to replication protein A-single-stranded DNA promotes ATR-ATRIP localization but is dispensable for Chk1 phosphorylation MSH2 and ATR form a signaling module and regulate two branches of the damage response to DNA methylation Purification and characterization of human DNA damage checkpoint Rad complexes
Aerosols transmit prions to immunocompetent and immunodeficient mice	scientific article	en:Aerosols transmit prions to immunocompetent and immunodeficient mice	2011		21249178	3020930	10.1371/journal.ppat.1001257	Asymptomatic deer excrete infectious prions in faeces Prions
Man the fat hunter: the demise of Homo erectus and the emergence of a new hominin lineage in the Middle Pleistocene (ca. 400 kyr) Levant	scientific article	en:Man the fat hunter: the demise of Homo erectus and the emergence of a new hominin lineage in the Middle Pleistocene (ca. 400 kyr) Levant	2011		22174868	3235142	10.1371/journal.pone.0028689	Denisova admixture and the first modern human dispersals into Southeast Asia and Oceania On the earliest evidence for habitual use of fire in Europe Genetic history of an archaic hominin group from Denisova Cave in Siberia Out of Africa: modern human origins special feature: the origin of Neandertals Out of Africa: modern human origins special feature: isotopic evidence for the diets of European Neanderthals and early modern humans Cooperative hunting and meat sharing 400-200 kya at Qesem Cave, Israel Diet and the evolution of human amylase gene copy number variation Global archaeological evidence for proboscidean overkill Archaic African and Asian lineages in the genetic ancestry of modern humans
Outbreak of beriberi among African Union troops in Mogadishu, Somalia	scientific article	en:Outbreak of beriberi among African Union troops in Mogadishu, Somalia	2011		22205947	3244391	10.1371/journal.pone.0028345	Epidemic dropsy in India
Three-dimensionally preserved integument reveals hydrodynamic adaptations in the extinct marine lizard Ectenosaurus (Reptilia, Mosasauridae)	scientific article	en:Three-dimensionally preserved integument reveals hydrodynamic adaptations in the extinct marine lizard Ectenosaurus (Reptilia, Mosasauridae)	2011		22110629	3217950	10.1371/journal.pone.0027343	Convergent evolution in aquatic tetrapods: insights from an exceptional fossil mosasaur
A molecular phylogeny of the Chalcidoidea (Hymenoptera)	scientific article	en:A molecular phylogeny of the Chalcidoidea (Hymenoptera)	2011		22087244	3207832	10.1371/journal.pone.0027023	A new genus of fossil Mymaridae (Hymenoptera) from Cretaceous amber and key to Cretaceous mymarid genera Toward reconstructing the evolution of advanced moths and butterflies (Lepidoptera: Ditrysia): an initial molecular study MAFFT version 5: improvement in accuracy of multiple sequence alignment MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform
Suicidal behavior and depression in smoking cessation treatments	scientific article	en:Suicidal behavior and depression in smoking cessation treatments	2011		22073240	3206890	10.1371/journal.pone.0027016	Risk of serious adverse cardiovascular events associated with varenicline: a systematic review and meta-analysis The global research neglect of unassisted smoking cessation: causes and consequences Smoking and suicide: a brief overview Injury death excesses in smokers: a 1990-95 United States national cohort study
A new basal sauropodomorph (Dinosauria: Saurischia) from Quebrada del Barro Formation (Marayes-El Carrizal Basin), northwestern Argentina	scientific article	en:A new basal sauropodomorph (Dinosauria: Saurischia) from Quebrada del Barro Formation (Marayes-El Carrizal Basin), northwestern Argentina	2011		22096511	3212523	10.1371/journal.pone.0026964	A new herrerasaurid (Dinosauria, Saurischia) from the Upper Triassic Ischigualasto Formation of northwestern Argentina Dispersal and diversity in the earliest North American sauropodomorph dinosaurs, with a description of a new taxon A new Basal sauropodomorph dinosaur from the Lower Jurassic Navajo sandstone of Southern Utah A new transitional sauropodomorph dinosaur from the Early Jurassic of South Africa and the evolution of sauropod feeding and quadrupedalism A basal sauropodomorph (Dinosauria: Saurischia) from the Ischigualasto Formation (Triassic, Carnian) and the early evolution of Sauropodomorpha
Benefit from B-lymphocyte depletion using the anti-CD20 antibody rituximab in chronic fatigue syndrome. A double-blind and placebo-controlled study	scientific article	en:Benefit from B-lymphocyte depletion using the anti-CD20 antibody rituximab in chronic fatigue syndrome. A double-blind and placebo-controlled study	2011		22039471	3198463	10.1371/journal.pone.0026358	Serologic and PCR testing of persons with chronic fatigue syndrome in the United States shows no association with xenotropic or polytropic murine leukemia virus-related viruses Detection of MLV-related virus gene sequences in blood of patients with chronic fatigue syndrome and healthy blood donors Long-lived plasma cells and memory B cells produce pathogenic anti-GAD65 autoantibodies in Stiff Person Syndrome Clinical impact of B-cell depletion with the anti-CD20 antibody rituximab in chronic fatigue syndrome: a preliminary case series High levels of type 2 cytokine-producing cells in chronic fatigue syndrome
Multiple geographic origins of commensalism and complex dispersal history of Black Rats	scientific article	en:Multiple geographic origins of commensalism and complex dispersal history of Black Rats	2011		22073158	3206810	10.1371/journal.pone.0026357	Quantitative prediction of molecular clock and ka/ks at short timescales Phylogeny and biogeography of African Murinae based on mitochondrial and nuclear gene sequences, with a new tribal classification of the subfamily Relaxed phylogenetics and dating with confidence Tracing European founder lineages in the Near Eastern mtDNA pool Yersinia pestis, the cause of plague, is a recently emerged clone of Yersinia pseudotuberculosis Patterns of prehistoric human mobility in polynesia indicated by mtDNA from the Pacific rat Statistical tests of neutrality of mutations
MiR-221 influences effector functions and actin cytoskeleton in mast cells	scientific article	en:MiR-221 influences effector functions and actin cytoskeleton in mast cells	2011		22022537	3192147	10.1371/journal.pone.0026133	MicroRNA-221-222 regulate the cell cycle in mast cells Detecting microRNA binding and siRNA off-target effects from expression data The impact of microRNAs on protein output A dual task for the Xbp1-responsive OS-9 variants in the mammalian endoplasmic reticulum: inhibiting secretion of misfolded protein conformers and enhancing their disposal Regulation of the p27(Kip1) tumor suppressor by miR-221 and miR-222 promotes cancer cell proliferation miRBase: microRNA sequences, targets and gene nomenclature
Dancing for food in the deep sea: bacterial farming by a new species of Yeti crab	scientific article	en:Dancing for food in the deep sea: bacterial farming by a new species of Yeti crab	2011		22140426	3227565	10.1371/journal.pone.0026243	Mitochondrial gene rearrangements confirm the parallel evolution of the crab-like form
Dinosaur speed demon: the caudal musculature of Carnotaurus sastrei and implications for the evolution of South American abelisaurids	scientific article	en:Dinosaur speed demon: the caudal musculature of Carnotaurus sastrei and implications for the evolution of South American abelisaurids	2011		22043292	3197156	10.1371/journal.pone.0025763	Estimating impact forces of tail club strikes by ankylosaurid dinosaurs
The establishment of genetically engineered canola populations in the U.S	scientific article	en:The establishment of genetically engineered canola populations in the U.S	2011		21998689	3187797	10.1371/journal.pone.0025736	Evidence for landscape-level, pollen-mediated gene flow from genetically modified creeping bentgrass with CP4 EPSPS as a marker
The sail-backed reptile Ctenosauriscus from the latest Early Triassic of Germany and the timing and biogeography of the early archosaur radiation	scientific article	en:The sail-backed reptile Ctenosauriscus from the latest Early Triassic of Germany and the timing and biogeography of the early archosaur radiation	2011		22022431	3194824	10.1371/journal.pone.0025693	Footprints pull origin and diversification of dinosaur stem lineage deep into Early Triassic Extreme convergence in the body plans of an early suchian (Archosauria) and ornithomimid dinosaurs (Theropoda) Arizonasaurus and its implications for archosaur divergence
A test of the coordinated expression hypothesis for the origin and maintenance of the GAL cluster in yeast	scientific article	en:A test of the coordinated expression hypothesis for the origin and maintenance of the GAL cluster in yeast	2011		21966486	3178652	10.1371/journal.pone.0025290	Selfish operons: horizontal transfer may drive the evolution of gene clusters
Cranial growth and variation in edmontosaurs (Dinosauria: Hadrosauridae): implications for latest Cretaceous megaherbivore diversity in North America	scientific article	en:Cranial growth and variation in edmontosaurs (Dinosauria: Hadrosauridae): implications for latest Cretaceous megaherbivore diversity in North America	2011		21969872	3182183	10.1371/journal.pone.0025186	Anatomy and taxonomic status of the chasmosaurine ceratopsid Nedoceratops hatcheri from the upper Cretaceous Lance Formation of Wyoming, U.S.A Extreme cranial ontogeny in the upper cretaceous dinosaur pachycephalosaurus Estimating the diversity of dinosaurs
An unprecedented role reversal: ground beetle larvae (Coleoptera: Carabidae) lure amphibians and prey upon them	scientific article	en:An unprecedented role reversal: ground beetle larvae (Coleoptera: Carabidae) lure amphibians and prey upon them	2011		21957480	3177849	10.1371/journal.pone.0025161	Predation of amphibians by carabid beetles of the genus Epomis found in the central coastal plain of Israel
Analysis of VEGF--a regulated gene expression in endothelial cells to identify genes linked to angiogenesis	scientific article	en:Analysis of VEGF--a regulated gene expression in endothelial cells to identify genes linked to angiogenesis	2011		21931866	3172305	10.1371/journal.pone.0024887	Transcriptional profiling reveals a critical role for tyrosine phosphatase VE-PTP in regulation of VEGFR2 activity and endothelial cell morphogenesis Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles Metastasis suppressor CC3 inhibits angiogenic properties of tumor cells in vitro Interaction of endostatin with integrins implicated in angiogenesis Gene ontology: tool for the unification of biology. The Gene Ontology Consortium Angiopoietin-2, a natural antagonist for Tie2 that disrupts in vivo angiogenesis
Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry identification of mycobacteria in routine clinical practice	scientific article	en:Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry identification of mycobacteria in routine clinical practice	2011		21935444	3172293	10.1371/journal.pone.0024720	Probable zoonotic leprosy in the southern United States Microscopic-observation drug-susceptibility assay for the diagnosis of TB Identification of mycobacteria by matrix-assisted laser desorption ionization-time-of-flight mass spectrometry
Some like it hot: the influence and implications of climate change on coffee berry borer (Hypothenemus hampei) and coffee production in East Africa	scientific article	en:Some like it hot: the influence and implications of climate change on coffee berry borer (Hypothenemus hampei) and coffee production in East Africa	2011		21935419	3173381	10.1371/journal.pone.0024528	Thermal tolerance of the coffee berry borer Hypothenemus hampei: predictions of climate change impact on a tropical insect pest
A new troodontid theropod, Talos sampsoni gen. et sp. nov., from the Upper Cretaceous Western Interior Basin of North America	scientific article	en:A new troodontid theropod, Talos sampsoni gen. et sp. nov., from the Upper Cretaceous Western Interior Basin of North America	2011		21949721	3176273	10.1371/journal.pone.0024487	A new troodontid theropod dinosaur from the lower Cretaceous of Utah New horned dinosaurs from Utah provide evidence for intracontinental dinosaur endemism Growth patterns in brooding dinosaurs reveals the timing of sexual maturity in non-avian dinosaurs and genesis of the avian condition Dinosaurs, dragons, and dwarfs: the evolution of maximal body size
A new dolphin species, the Burrunan Dolphin Tursiops australis sp. nov., endemic to southern Australian coastal waters	scientific article	en:A new dolphin species, the Burrunan Dolphin Tursiops australis sp. nov., endemic to southern Australian coastal waters	2011		21935372	3173360	10.1371/journal.pone.0024047	Relict or colonizer? Extinction and range expansion of penguins in southern New Zealand
The Later Stone Age calvaria from Iwo Eleru, Nigeria: morphology and chronology	scientific article	en:The Later Stone Age calvaria from Iwo Eleru, Nigeria: morphology and chronology	2011		21949689	3174138	10.1371/journal.pone.0024024	Genetic evidence for archaic admixture in Africa The genetic structure and history of Africans and African Americans
Matrin 3 binds and stabilizes mRNA	scientific article	en:Matrin 3 binds and stabilizes mRNA	2011		21858232	3157474	10.1371/journal.pone.0023882	LARP7 is a stable component of the 7SK snRNP while P-TEFb, HEXIM1 and hnRNP A1 are reversibly associated RNA helicase A interacts with nuclear factor kappaB p65 and functions as a transcriptional coactivator Dual roles of RNA helicase A in CREB-dependent transcription BRCA1 protein is linked to the RNA polymerase II holoenzyme complex via RNA helicase A Molecular cloning of matrin 3. A 125-kilodalton protein of the nuclear matrix contains an extensive acidic domain
Nuttalliella namaqua: a living fossil and closest relative to the ancestral tick lineage: implications for the evolution of blood-feeding in ticks	scientific article	en:Nuttalliella namaqua: a living fossil and closest relative to the ancestral tick lineage: implications for the evolution of blood-feeding in ticks	2011		21858204	3157464	10.1371/journal.pone.0023675	Recovery from the most profound mass extinction of all time Survival without recovery after mass extinctions
Human pathogen shown to cause disease in the threatened eklhorn coral Acropora palmata	scientific article	en:Human pathogen shown to cause disease in the threatened eklhorn coral Acropora palmata	2011		21858132	3157384	10.1371/journal.pone.0023468	The etiology of white pox, a lethal disease of the Caribbean elkhorn coral, Acropora palmata
Protein X of hepatitis B virus: origin and structure similarity with the central domain of DNA glycosylase	scientific article	en:Protein X of hepatitis B virus: origin and structure similarity with the central domain of DNA glycosylase	2011		21850270	3153941	10.1371/journal.pone.0023392	A promiscuous alpha-helical motif anchors viral hijackers and substrate receptors to the CUL4-DDB1 ubiquitin ligase machinery I-TASSER server for protein 3D structure prediction Molecular evolution of hepatitis B virus over 25 years PatchDock and SymmDock: servers for rigid and symmetric docking ProbCons: Probabilistic consistency-based multiple sequence alignment The enigmatic X gene of hepatitis B virus Reconstruction of ancestral protein sequences and its applications MUSCLE: multiple sequence alignment with high accuracy and high throughput Crystal structure of a G:T/U mismatch-specific DNA glycosylase: mismatch recognition by complementary-strand interactions CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
Fukutin-related protein resides in the Golgi cisternae of skeletal muscle fibres and forms disulfide-linked homodimers via an N-terminal interaction	scientific article	en:Fukutin-related protein resides in the Golgi cisternae of skeletal muscle fibres and forms disulfide-linked homodimers via an N-terminal interaction	2011		21886772	3160285	10.1371/journal.pone.0022968	Mutations alter secretion of fukutin-related protein A comparative study of alpha-dystroglycan glycosylation in dystroglycanopathies suggests that the hypoglycosylation of alpha-dystroglycan does not consistently correlate with clinical severity POMT2 mutations cause alpha-dystroglycan hypoglycosylation and Walker-Warburg syndrome Subcellular localization of fukutin and fukutin-related protein in muscle cells Demonstration of mammalian protein O-mannosyltransferase activity: coexpression of POMT1 and POMT2 required for enzymatic activity Mutations in the O-mannosyltransferase gene POMT1 give rise to the severe neuronal migration disorder Walker-Warburg syndrome Muscular dystrophy and neuronal migration disorder caused by mutations in a glycosyltransferase, POMGnT1 Mutations in the fukutin-related protein gene (FKRP) cause a form of congenital muscular dystrophy with secondary laminin alpha2 deficiency and abnormal glycosylation of alpha-dystroglycan An ancient retrotransposal insertion causes Fukuyama-type congenital muscular dystrophy
A 33,000-year-old incipient dog from the Altai Mountains of Siberia: evidence of the earliest domestication disrupted by the Last Glacial Maximum	scientific article	en:A 33,000-year-old incipient dog from the Altai Mountains of Siberia: evidence of the earliest domestication disrupted by the Last Glacial Maximum	2011		21829526	3145761	10.1371/journal.pone.0022821	Genome-wide SNP and haplotype analyses reveal a rich history underlying dog domestication
Linking hydrothermal geochemistry to organismal physiology: physiological versatility in Riftia pachyptila from sedimented and basalt-hosted vents	scientific article	en:Linking hydrothermal geochemistry to organismal physiology: physiological versatility in Riftia pachyptila from sedimented and basalt-hosted vents	2011		21779334	3136470	10.1371/journal.pone.0021692	Evidence for autotrophic CO2 fixation via the reductive tricarboxylic acid cycle by members of the epsilon subdivision of proteobacteria The COG database: an updated version includes eukaryotes
The age of the 20 meter Solo River terrace, Java, Indonesia and the survival of Homo erectus in Asia	scientific article	en:The age of the 20 meter Solo River terrace, Java, Indonesia and the survival of Homo erectus in Asia	2011		21738710	3126814	10.1371/journal.pone.0021562	Pygmoid Australomelanesian Homo sapiens skeletal remains from Liang Bua, Flores: population affinities and pathological abnormalities
The reality of Neandertal symbolic behavior at the Grotte du Renne, Arcy-sur-Cure, France	scientific article	en:The reality of Neandertal symbolic behavior at the Grotte du Renne, Arcy-sur-Cure, France	2011		21738702	3126825	10.1371/journal.pone.0021545	Evolution, revolution or saltation scenario for the emergence of modern cultures? Neanderthal symbolism and ornament manufacture: the bursting of a bubble? Out of Africa: modern human origins special feature: explaining worldwide patterns of human genetic variation using a coalescent-based serial founder model of migration outward from Africa Out of Africa: modern human origins special feature: middle and later Pleistocene hominins in Africa and Southwest Asia Analysis of Aurignacian interstratification at the Chatelperronian-type site and implications for the behavioral modernity of Neandertals Revised direct radiocarbon dating of the Vindija G1 Upper Paleolithic Neandertals
The Drosophila gap gene network is composed of two parallel toggle switches	scientific article	en:The Drosophila gap gene network is composed of two parallel toggle switches	2011		21747931	3128594	10.1371/journal.pone.0021145	Spatial bistability generates hunchback expression sharpness in the Drosophila embryo Network evolution of body plans
Vitamin A and retinoid derivatives for lung cancer: a systematic review and meta analysis	scientific article	en:Vitamin A and retinoid derivatives for lung cancer: a systematic review and meta analysis	2011	lung cancer	21738614	3124481	10.1371/journal.pone.0021107	Long-term results for children with high-risk neuroblastoma treated on a randomized trial of myeloablative therapy followed by 13-cis-retinoic acid: a children's oncology group study
Efficient immunoglobulin gene disruption and targeted replacement in rabbit using zinc finger nucleases	scientific article	en:Efficient immunoglobulin gene disruption and targeted replacement in rabbit using zinc finger nucleases	2011		21695153	3113902	10.1371/journal.pone.0021045	Knockout rats via embryo microinjection of zinc-finger nucleases Progress and prospects: zinc-finger nucleases as gene therapy agents Targeted gene inactivation in zebrafish using engineered zinc-finger nucleases Heritable targeted gene disruption in zebrafish using designed zinc-finger nucleases
Improved phylogenetic analyses corroborate a plausible position of Martialis heureka in the ant tree of life	scientific article	en:Improved phylogenetic analyses corroborate a plausible position of Martialis heureka in the ant tree of life	2011		21731644	3123331	10.1371/journal.pone.0021031	The root of the East African cichlid radiations Newly discovered sister lineage sheds light on early ant evolution Evaluating alternative hypotheses for the early evolution and diversification of ants The accuracy of several multiple sequence alignment programs for proteins The rise of the ants: a phylogenetic and ecological explanation A formicine in New Jersey cretaceous amber (Hymenoptera: formicidae) and early evolution of the ants
The oldest anatomically modern humans from far southeast Europe: direct dating, culture and behavior	scientific article	en:The oldest anatomically modern humans from far southeast Europe: direct dating, culture and behavior	2011		21698105	3117838	10.1371/journal.pone.0020834	Genetic history of an archaic hominin group from Denisova Cave in Siberia Pego do Diabo (Loures, Portugal): dating the emergence of anatomical modernity in westernmost Eurasia Out of Africa: modern human origins special feature: isotopic evidence for the diets of European Neanderthals and early modern humans Out of Africa: modern human origins special feature: the spread of modern humans in Europe Neanderthal extinction by competitive exclusion Early modern humans from the Pestera Muierii, Baia de Fier, Romania An early modern human from the Peştera cu Oase, Romania
Phylogeography of a land snail suggests trans-Mediterranean neolithic transport	scientific article	en:Phylogeography of a land snail suggests trans-Mediterranean neolithic transport	2011		21731622	3120762	10.1371/journal.pone.0020734	Domestication and early agriculture in the Mediterranean Basin: Origins, diffusion, and impact CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
High-throughput sequencing of six bamboo chloroplast genomes: phylogenetic implications for temperate woody bamboos (Poaceae: Bambusoideae)	scientific article	en:High-throughput sequencing of six bamboo chloroplast genomes: phylogenetic implications for temperate woody bamboos (Poaceae: Bambusoideae)	2011		21655229	3105084	10.1371/journal.pone.0020596	Phylogenetic analysis of 83 plastid genes further resolves the early diversification of eudicots De novo assembly of human genomes with massively parallel short read sequencing Ultrafast and memory-efficient alignment of short DNA sequences to the human genome Analysis of 81 genes from 64 plastid genomes resolves relationships in angiosperms and identifies genome-scale evolutionary patterns Q24531822 MAFFT version 5: improvement in accuracy of multiple sequence alignment Model selection and model averaging in phylogenetics: advantages of akaike information criterion and bayesian approaches over likelihood ratio tests Uniparental inheritance of mitochondrial and chloroplast genes: mechanisms and evolution
Mycobacterium tuberculosis complex mycobacteria as amoeba-resistant organisms	scientific article	en:Mycobacterium tuberculosis complex mycobacteria as amoeba-resistant organisms	2011		21673985	3108610	10.1371/journal.pone.0020499	Isolation of Legionella anisa using an amoebic coculture procedure
Avian ultraviolet/violet cones identified as probable magnetoreceptors	scientific article	en:Avian ultraviolet/violet cones identified as probable magnetoreceptors	2011		21647441	3102070	10.1371/journal.pone.0020091	A visual pathway links brain structures active during magnetic compass orientation in migratory birds Diversification of Neoaves: integration of molecular sequence data and fossils The cryptochromes
Reevaluation of the value of autoparasitoids in biological control	scientific article	en:Reevaluation of the value of autoparasitoids in biological control	2011		21633501	3102091	10.1371/journal.pone.0020324	No need to discriminate? Reproductive diploid males in a parasitoid with complementary sex determination
What is new for an old molecule? Systematic review and recommendations on the use of resveratrol	scientific article	en:What is new for an old molecule? Systematic review and recommendations on the use of resveratrol	2011		21698226	3116821	10.1371/journal.pone.0019881	Small molecule activators of SIRT1 as therapeutics for the treatment of type 2 diabetes
Dissecting the specificity of protein-protein interaction in bacterial two-component signaling: orphans and crosstalks	scientific article	en:Dissecting the specificity of protein-protein interaction in bacterial two-component signaling: orphans and crosstalks	2011		21573011	3090404	10.1371/journal.pone.0019729	Disentangling direct from indirect co-evolution of residues in protein alignments The Pfam protein families database Two-component signal transduction pathways regulating growth and cell cycle progression in a bacterium: a system-level analysis Structural basis of activity and allosteric control of diguanylate cyclase Keeping signals straight in phosphorelay signal transduction
Global biodiversity and phylogenetic evaluation of remipedia (crustacea)	scientific article	en:Global biodiversity and phylogenetic evaluation of remipedia (crustacea)	2011		21625553	3098257	10.1371/journal.pone.0019627	Phylogenetic analysis of mitochondrial protein coding genes confirms the reciprocal paraphyly of Hexapoda and Crustacea THE CEPHALOCARIDA, A NEW SUBCLASS OF CRUSTACEA FROM LONG ISLAND SOUND Mitochondrial genomes suggest that hexapods and crustaceans are mutually paraphyletic Pancrustacean phylogeny: hexapods are terrestrial crustaceans and maxillopods are not monophyletic Phylogenetic position of the Pentastomida and (pan)crustacean relationships MUSCLE: multiple sequence alignment with high accuracy and high throughput
Citizen science reveals unexpected continental-scale evolutionary change in a model organism	scientific article	en:Citizen science reveals unexpected continental-scale evolutionary change in a model organism	2011		21556137	3083392	10.1371/journal.pone.0018927	Natural Selection in Cepaea
Inferences of diplodocoid (Sauropoda: Dinosauria) feeding behavior from snout shape and microwear analyses	scientific article	en:Inferences of diplodocoid (Sauropoda: Dinosauria) feeding behavior from snout shape and microwear analyses	2011		21494685	3071828	10.1371/journal.pone.0018304	First complete sauropod dinosaur skull from the Cretaceous of the Americas and the evolution of sauropod dentition Quantitative analysis of dental microwear in hadrosaurid dinosaurs, and the implications for hypotheses of jaw mechanics and feeding Estimating mass properties of dinosaurs using laser imaging and 3D computer modelling In vitro digestibility of fern and gymnosperm foliage: implications for sauropod feeding ecology and diet selection Ancestral feeding state of ruminants reconsidered: earliest grazing adaptation claims a mixed condition for Cervidae Structural extremes in a cretaceous dinosaur Dinosaur fossils predict body temperatures Complete mitochondrial genome suggests diapsid affinities of turtles
Ancient DNA suggests dwarf and 'giant' emu are conspecific	scientific article	en:Ancient DNA suggests dwarf and 'giant' emu are conspecific	2011		21494561	3073985	10.1371/journal.pone.0018728	Identification of Birds through DNA Barcodes
On the origin and trigger of the notothenioid adaptive radiation	scientific article	en:On the origin and trigger of the notothenioid adaptive radiation	2011		21533117	3078932	10.1371/journal.pone.0018911	Lateral transfer of a lectin-like antifreeze protein gene in fishes Relaxed phylogenetics and dating with confidence Out of Tanganyika: genesis, explosive speciation, key-innovations and phylogeography of the haplochromine cichlid fishes New dinosaurs link southern landmasses in the Mid-Cretaceous Convergent evolution of antifreeze glycoproteins in Antarctic notothenioid fish and Arctic cod Evolution of antifreeze glycoprotein gene from a trypsinogen gene in Antarctic notothenioid fish
A live-attenuated HSV-2 ICP0 virus elicits 10 to 100 times greater protection against genital herpes than a glycoprotein D subunit vaccine	scientific article	en:A live-attenuated HSV-2 ICP0 virus elicits 10 to 100 times greater protection against genital herpes than a glycoprotein D subunit vaccine	2011		21412438	3055896	10.1371/journal.pone.0017748	Herpes simplex virus 2 ICP0 mutant viruses are avirulent and immunogenic: implications for a genital herpes vaccine ICP0 dismantles microtubule networks in herpes simplex virus-infected cells ICP0 antagonizes ICP4-dependent silencing of the herpes simplex virus ICP0 gene The smallpox story: life and death of an old disease
Multiple invasions into freshwater by pufferfishes (teleostei: tetraodontidae): a mitogenomic perspective	scientific article	en:Multiple invasions into freshwater by pufferfishes (teleostei: tetraodontidae): a mitogenomic perspective	2011		21364898	3045446	10.1371/journal.pone.0017410	Nine exceptional radiations plus high turnover explain species diversity in jawed vertebrates A new perspective on phylogeny and evolution of tetraodontiform fishes (Pisces: Acanthopterygii) based on whole mitochondrial genome sequences: basal ecological diversification? Marine incursion: the freshwater herring of Lake Tanganyika are the product of a marine invasion into west Africa
Hidden diversity behind the zombie-ant fungus Ophiocordyceps unilateralis: four new species described from carpenter ants in Minas Gerais, Brazil	scientific article	en:Hidden diversity behind the zombie-ant fungus Ophiocordyceps unilateralis: four new species described from carpenter ants in Minas Gerais, Brazil	2011		21399679	3047535	10.1371/journal.pone.0017024	Phylogenetic classification of Cordyceps and the clavicipitaceous fungi
Time and origin of cichlid colonization of the lower Congo rapids	scientific article	en:Time and origin of cichlid colonization of the lower Congo rapids	2011		21799840	3140524	10.1371/journal.pone.0022380	The root of the East African cichlid radiations AFLP: a new technique for DNA fingerprinting
Involvement of the efflux pumps in chloramphenicol selected strains of Burkholderia thailandensis: proteomic and mechanistic evidence	scientific article	en:Involvement of the efflux pumps in chloramphenicol selected strains of Burkholderia thailandensis: proteomic and mechanistic evidence	2011		21347382	3036723	10.1371/journal.pone.0016892	The BpeAB-OprB efflux pump of Burkholderia pseudomallei 1026b does not play a role in quorum sensing, virulence factor production, or extrusion of aminoglycosides but is a broad-spectrum drug efflux system Molecular basis of rare aminoglycoside susceptibility and pathogenesis of Burkholderia pseudomallei clinical isolates from Thailand Pneumonia and septicemia caused by Burkholderia thailandensis in the United States Efflux-mediated aminoglycoside and macrolide resistance in Burkholderia pseudomallei
Sebacinales everywhere: previously overlooked ubiquitous fungal endophytes	scientific article	en:Sebacinales everywhere: previously overlooked ubiquitous fungal endophytes	2011		21347229	3039649	10.1371/journal.pone.0016793	The root endophytic fungus Piriformospora indica requires host cell death for proliferation during mutualistic symbiosis with barley The endophytic fungus Piriformospora indica reprograms barley to salt-stress tolerance, disease resistance, and higher yield Q24550558 Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
Novel allelic variants in the canine cyclooxgenase-2 (Cox-2) promoter are associated with renal dysplasia in dogs	scientific article	en:Novel allelic variants in the canine cyclooxgenase-2 (Cox-2) promoter are associated with renal dysplasia in dogs	2011		21346820	3035645	10.1371/journal.pone.0016684	RB1 gene mutation up-date, a meta-analysis based on 932 reported mutations available in a searchable database
A complete skull of an early cretaceous sauropod and the evolution of advanced titanosaurians	scientific article	en:A complete skull of an early cretaceous sauropod and the evolution of advanced titanosaurians	2011		21326881	3034730	10.1371/journal.pone.0016663	New Mid-Cretaceous (latest Albian) dinosaurs fromWinton, Queensland, Australia New dinosaurs link southern landmasses in the Mid-Cretaceous
Non-visual effects of light on melatonin, alertness and cognitive performance: can blue-enriched light keep us alert?	scientific article	en:Non-visual effects of light on melatonin, alertness and cognitive performance: can blue-enriched light keep us alert?	2011		21298068	3027693	10.1371/journal.pone.0016429	Circadian rhythm sleep disorders: part II, advanced sleep phase disorder, delayed sleep phase disorder, free-running disorder, and irregular sleep-wake rhythm. An American Academy of Sleep Medicine review Melanopsin-containing retinal ganglion cells: architecture, projections, and intrinsic photosensitivity A novel human opsin in the inner retina
The cryptic African wolf: Canis aureus lupaster is not a golden jackal and is not endemic to Egypt	scientific article	en:The cryptic African wolf: Canis aureus lupaster is not a golden jackal and is not endemic to Egypt	2011		21298107	3027653	10.1371/journal.pone.0016385	Ancient wolf lineages in India
Crocodiles in the Sahara desert: an update of distribution, habitats and population status for conservation planning in Mauritania	scientific article	en:Crocodiles in the Sahara desert: an update of distribution, habitats and population status for conservation planning in Mauritania	2011		21364897	3045445	10.1371/journal.pone.0014734	Lakeside cemeteries in the Sahara: 5000 years of holocene population and environmental change Simulation of Sahel drought in the 20th and 21st centuries
A new sauropodomorph dinosaur from the Early Jurassic of Patagonia and the origin and evolution of the sauropod-type sacrum	scientific article	en:A new sauropodomorph dinosaur from the Early Jurassic of Patagonia and the origin and evolution of the sauropod-type sacrum	2011		21298087	3027623	10.1371/journal.pone.0014572	Biology of the sauropod dinosaurs: the evolution of gigantism A new transitional sauropodomorph dinosaur from the Early Jurassic of South Africa and the evolution of sauropod feeding and quadrupedalism The earliest known sauropod dinosaur and the first steps towards sauropod locomotion
The in vivo kinetics of RNA polymerase II elongation during co-transcriptional splicing	scientific article	en:The in vivo kinetics of RNA polymerase II elongation during co-transcriptional splicing	2011		21264352	3019111	10.1371/journal.pbio.1000573	Stepwise RNP assembly at the site of H/ACA RNA transcription in human cells Splicing and transcription-associated proteins PSF and p54nrb/nonO bind to the RNA polymerase II CTD Initial sequencing and analysis of the human genome
Application of handheld devices to field research among underserved construction worker populations: a workplace health assessment pilot study	scientific article	en:Application of handheld devices to field research among underserved construction worker populations: a workplace health assessment pilot study	2011		21453552	3078837	10.1186/1476-069X-10-27	Obesity in US workers: The National Health Interview Survey, 1986 to 2002
Exposure to repetitive tasks induces motor changes related to skill acquisition and inflammation in rats	scientific article	en:Exposure to repetitive tasks induces motor changes related to skill acquisition and inflammation in rats	2011	biophysics	22087754	3727635	10.1080/00222895.2011.627897	Joint inflammation and early degeneration induced by high-force reaching are attenuated by ibuprofen in an animal model of work-related musculoskeletal disorder Exposure-dependent increases in IL-1beta, substance P, CTGF, and tendinosis in flexor digitorum tendons with upper extremity repetitive strain injury Peripheral and central changes combine to induce motor behavioral deficits in a moderate repetition task High force reaching task induces widespread inflammation, increased spinal cord neurochemicals and neuropathic pain Peripheral neuritis and increased spinal cord neurochemicals are induced in a model of repetitive motion injury with low force and repetition exposure Inflammation and the pathophysiology of work-related musculoskeletal disorders Randomized clinical trial of surgery versus conservative therapy for carpal tunnel syndrome [ISRCTN84286481] Median nerve trauma in a rat model of work-related musculoskeletal disorder Chronic repetitive reaching and grasping results in decreased motor performance and widespread tissue responses in a rat model of MSD
WORKPLACE SOCIAL SUPPORT AND WORK-FAMILY CONFLICT: A META-ANALYSIS CLARIFYING THE INFLUENCE OF GENERAL AND WORK-FAMILY-SPECIFIC SUPERVISOR AND ORGANIZATIONAL SUPPORT	scientific article	en:WORKPLACE SOCIAL SUPPORT AND WORK-FAMILY CONFLICT: A META-ANALYSIS CLARIFYING THE INFLUENCE OF GENERAL AND WORK-FAMILY-SPECIFIC SUPERVISOR AND ORGANIZATIONAL SUPPORT	2011		21691415	3116443	10.1111/j.1744-6570.2011.01211.x	Development and Validation of a Multidimensional Measure of Family Supportive Supervisor Behaviors (FSSB) Clarifying work-family intervention processes: the roles of work-family conflict and family-supportive supervisor behaviors
Cancer and noncancer mortality among American seafood workers	scientific article	en:Cancer and noncancer mortality among American seafood workers	2011		21467730	3899410	10.2188/jea.JE20100147	Potential exposure to PCBs, DDT, and PBDEs from sport-caught fish consumption in relation to breast cancer risk in Wisconsin
Social capital and women's reduced vulnerability to HIV infection in rural Zimbabwe		en:Social capital and women's reduced vulnerability to HIV infection in rural Zimbabwe	2011		22066129	3302682		The role of social capital in successful adherence to antiretroviral therapy in Africa
Low-level gestational lead exposure increases retinal progenitor cell proliferation and rod photoreceptor and bipolar cell neurogenesis in mice	scientific article	en:Low-level gestational lead exposure increases retinal progenitor cell proliferation and rod photoreceptor and bipolar cell neurogenesis in mice	2011-01		20840909	3018503	10.1289/ehp.1002524	Low-level human equivalent gestational lead exposure produces supernormal scotopic electroretinograms, increased retinal neurogenesis, and decreased retinal dopamine utilization in rats
Physical examination has a low yield in screening for carpal tunnel syndrome	scientific article	en:Physical examination has a low yield in screening for carpal tunnel syndrome	2011-01		21154516	3624757	10.1002/ajim.20915	Diagnostic tests 4: likelihood ratios Consensus criteria for the classification of carpal tunnel syndrome in epidemiologic studies The sensitivity and specificity of tests for carpal tunnel syndrome vary with the comparison subjects
Evaluation of the COSHH Essentials model with a mixture of organic chemicals at a medium-sized paint producer	scientific article	en:Evaluation of the COSHH Essentials model with a mixture of organic chemicals at a medium-sized paint producer	2011-01		21047985	3020673	10.1093/annhyg/meq067	Evaluation of COSHH Essentials for Vapor Degreasing and Bag Filling Operations
Detection of airborne lactococcal bacteriophages in cheese manufacturing plants	scientific article	en:Detection of airborne lactococcal bacteriophages in cheese manufacturing plants	2011-01-15	food science Applied Microbiology and Biotechnology	21115712	3020544	10.1128/AEM.01391-10	Measurement of Airborne Influenza Virus in a Hospital Emergency Department Milk contamination and resistance to processing conditions determine the fate of Lactococcus lactis bacteriophages in dairies
A fresh look at the origin of Plasmodium falciparum, the most malignant malaria agent	Scientific Article about Malaria from PLoS Pathogens	en:A fresh look at the origin of Plasmodium falciparum, the most malignant malaria agent	2011-02-24	malaria	21383971	3044689	10.1371/journal.ppat.1001283	Origin of the human malaria parasite Plasmodium falciparum in gorillas African apes as reservoirs of Plasmodium falciparum and the origin and diversification of the Laverania subgenus On the diversity of malaria parasites in African apes and the origin of Plasmodium falciparum from Bonobos African great apes are natural hosts of multiple related malaria species, including Plasmodium falciparum Identification of Plasmodium malariae, a human malaria parasite, in imported chimpanzees The origin of malignant malaria A new malaria agent in African hominids Chimpanzee malaria parasites related to Plasmodium ovale in Africa Plasmodium knowlesi malaria in humans is widely distributed and potentially life threatening Evolutionary origin of Plasmodium and other Apicomplexa based on rRNA genes
Airborne nanoparticle concentrations in the manufacturing of polytetrafluoroethylene (PTFE) apparel	scientific article	en:Airborne nanoparticle concentrations in the manufacturing of polytetrafluoroethylene (PTFE) apparel	2011-03		21347955	4773197	10.1080/15459624.2011.554317	Ultrafine and Respirable Particles in an Automotive Grey Iron Foundry The Mapping of Fine and Ultrafine Particle Concentrations in an Engine Machining and Assembly Facility
Hierarchical latency models for dose-time-response associations	scientific article	en:Hierarchical latency models for dose-time-response associations	2011-03-15		21303803	3105259	10.1093/aje/kwq387	Follow-up study of chrysotile textile workers: cohort mortality and exposure-response
Changing Workplaces to Reduce Work-Family Conflict: Schedule Control in a White-Collar Organization	scientific article	en:Changing Workplaces to Reduce Work-Family Conflict: Schedule Control in a White-Collar Organization	2011-04		21580799	3094103	10.1177/0003122411400056	Clarifying work-family intervention processes: the roles of work-family conflict and family-supportive supervisor behaviors Gendered Challenge, Gendered Response: Confronting the Ideal Worker Norm in a White-Collar Organization 7 Getting There from Here: Research on the Effects of Work–Family Initiatives on Work–Family Conflict and Business Outcomes Work, family and life-course fit: Does control over work time matter?
Evaluation of microwave steam bags for the decontamination of filtering facepiece respirators	scientific article	en:Evaluation of microwave steam bags for the decontamination of filtering facepiece respirators	2011-04-15		21525995	3078131	10.1371/journal.pone.0018585	Evaluation of five decontamination methods for filtering facepiece respirators Development of a test system to evaluate procedures for decontamination of respirators containing viral droplets Development of a test system to apply virus-containing particles to filtering facepiece respirators for the evaluation of decontamination procedures
Probable non-vector-borne transmission of Zika virus, Colorado, USA	scientific article	en:Probable non-vector-borne transmission of Zika virus, Colorado, USA	2011-05	Zika virus Zika fever pathogen transmission	21529401	3321795	10.3201/eid1705.101939	Zika virus. I. Isolations and serological specificity
Impact of endofungal bacteria on infection biology, food safety, and drug development	scientific article	en:Impact of endofungal bacteria on infection biology, food safety, and drug development	2011-06		21738468	3128126	10.1371/journal.ppat.1002096	Characterization of Burkholderia rhizoxinica and B. endofungorum isolated from clinical specimens Multicentre phase II pharmacological evaluation of rhizoxin. Eortc early clinical studies (ECSG)/pharmacology and molecular mechanisms (PAMM) groups
E6 and E7 from beta HPV38 cooperate with ultraviolet light in the development of actinic keratosis-like lesions and squamous cell carcinoma in mice	scientific article	en:E6 and E7 from beta HPV38 cooperate with ultraviolet light in the development of actinic keratosis-like lesions and squamous cell carcinoma in mice	2011-07		21779166	3136451	10.1371/journal.ppat.1002125	Genus beta human papillomaviruses and incidence of basal cell and squamous cell carcinomas of skin: population based case-control study
In silico evidence for gluconeogenesis from fatty acids in humans	scientific article	en:In silico evidence for gluconeogenesis from fatty acids in humans	2011-07		21814506	3140964	10.1371/journal.pcbi.1002116	Global reconstruction of the human metabolic network based on genomic and bibliomic data Evolution of glyoxylate cycle enzymes in Metazoa: evidence of multiple horizontal transfer events and pseudogene formation Q24562858 Energy conservation in chemotrophic anaerobic bacteria
Antagonism of LIN-17/Frizzled and LIN-18/Ryk in nematode vulva induction reveals evolutionary alterations in core developmental pathways	scientific article	en:Antagonism of LIN-17/Frizzled and LIN-18/Ryk in nematode vulva induction reveals evolutionary alterations in core developmental pathways	2011-07		21814488	3144188	10.1371/journal.pbio.1001110	The Pristionchus pacificus genome provides a unique perspective on nematode lifestyle and parasitism Two functionally distinct Axin-like proteins regulate canonical Wnt signaling in C. elegans Mammalian Ryk is a Wnt coreceptor required for stimulation of neurite outgrowth
Impact of pesticide exposure misclassification on estimates of relative risks in the Agricultural Health Study	scientific article	en:Impact of pesticide exposure misclassification on estimates of relative risks in the Agricultural Health Study	2011-07		21257983	3566632	10.1136/oem.2010.059469	Pesticide use and adult-onset asthma among male farmers in the Agricultural Health Study Epidemiologic studies in agricultural populations: observations and future directions
Direct effects of carbon nanotubes on dendritic cells induce immune suppression upon pulmonary exposure	scientific article	en:Direct effects of carbon nanotubes on dendritic cells induce immune suppression upon pulmonary exposure	2011-07-26		21657201	3170729	10.1021/nn2014479	Dispersion of single-walled carbon nanotubes by a natural lung surfactant for pulmonary in vitro and in vivo toxicity studies Phosphatidylserine targets single-walled carbon nanotubes to professional phagocytes in vitro and in vivo Inhalation vs. aspiration of single-walled carbon nanotubes in C57BL/6 mice: inflammation, fibrosis, oxidative stress, and mutagenesis Sustained Effect of Inhaled Diesel Exhaust Particles on T-Lymphocyte-Mediated Immune Responses Against Listeria monocytogenes Unusual inflammatory and fibrogenic pulmonary responses to single-walled carbon nanotubes in mice
Phosphodiesterase-4 inhibition alters gene expression and improves isoniazid-mediated clearance of Mycobacterium tuberculosis in rabbit lungs	scientific article	en:Phosphodiesterase-4 inhibition alters gene expression and improves isoniazid-mediated clearance of Mycobacterium tuberculosis in rabbit lungs	2011-09		21949656	3174258	10.1371/journal.ppat.1002262	PDE4 inhibitors: current status Insights into the regulation of TNF-alpha production in human mononuclear cells: the effects of non-specific phosphodiesterase inhibition False beliefs about fattening foods can have healthy consequences Toll-like receptor signalling
A blind circadian clock in cavefish reveals that opsins mediate peripheral clock photoreception	scientific article	en:A blind circadian clock in cavefish reveals that opsins mediate peripheral clock photoreception	2011-09		21909239	3167789	10.1371/journal.pbio.1001142	Evolution of melanopsin photoreceptors: discovery and characterization of a new melanopsin in nonmammalian vertebrates ON TEMPERATURE INDEPENDENCE IN THE CLOCK SYSTEM CONTROLLING EMERGENCE TIME IN DROSOPHILA Temperature regulates transcription in the zebrafish circadian clock A nuclear isoform of the focal adhesion LIM-domain protein Trip6 integrates activating and repressing signals at AP-1- and NF-kappaB-regulated promoters Melanopsin: An opsin in melanophores, brain, and eye
Monoclonal antibodies to hyphal exoantigens derived from the opportunistic pathogen Aspergillus terreus	scientific article	en:Monoclonal antibodies to hyphal exoantigens derived from the opportunistic pathogen Aspergillus terreus	2011-09	Clinical Biochemistry	21734068	3165237	10.1128/CVI.05163-11	Production and characterization of IgM monoclonal antibodies against hyphal antigens of Stachybotrys species Epidemiology of Aspergillus terreus at a university hospital
Topography of tyrosine residues and their involvement in peroxidation of polyunsaturated cardiolipin in cytochrome c/cardiolipin peroxidase complexes	scientific article	en:Topography of tyrosine residues and their involvement in peroxidation of polyunsaturated cardiolipin in cytochrome c/cardiolipin peroxidase complexes	2011-09	biophysics cell biology	21550335	3321730	10.1016/j.bbamem.2011.04.009	Cytochrome c/cardiolipin relations in mitochondria: a kiss of death Peroxidase activity and structural transitions of cytochrome c bound to cardiolipin-containing membranes
Estimation of RF energy absorbed in the brain from mobile phones in the Interphone Study	scientific article	en:Estimation of RF energy absorbed in the brain from mobile phones in the Interphone Study	2011-09		21659468	3158331	10.1136/oemed-2011-100065	Risk of brain tumours in relation to estimated RF dose from mobile phones: results from five Interphone countries Mobile phone use, exposure to radiofrequency electromagnetic field, and brain tumour: a case-control study
Risk of brain tumours in relation to estimated RF dose from mobile phones: results from five Interphone countries	scientific article	en:Risk of brain tumours in relation to estimated RF dose from mobile phones: results from five Interphone countries	2011-09		21659469	3158328	10.1136/oemed-2011-100155	Estimation of RF energy absorbed in the brain from mobile phones in the Interphone Study Mobile phone use, exposure to radiofrequency electromagnetic field, and brain tumour: a case-control study
Antioxidant c-FLIP inhibits Fas ligand-induced NF-kappaB activation in a phosphatidylinositol 3-kinase/Akt-dependent manner	scientific article	en:Antioxidant c-FLIP inhibits Fas ligand-induced NF-kappaB activation in a phosphatidylinositol 3-kinase/Akt-dependent manner	2011-09-15		21856935	3169770	10.4049/jimmunol.1002915	Role of S-nitrosylation in apoptosis resistance and carcinogenesis The Fas Death Signaling Pathway Connecting Reactive Oxygen Species Generation and FLICE Inhibitory Protein Down-Regulation Phosphatidylinositol 3-Kinase/Akt Positively Regulates Fas (CD95)-Mediated Apoptosis in Epidermal Cl41 Cells Regulation of Fas (CD95)-induced apoptosis by nuclear factor-kappa B and tumor necrosis factor-alpha in macrophages FLICE-inhibitory proteins: regulators of death receptor-mediated apoptosis MRIT, a novel death-effector domain-containing protein, interacts with caspases and BclXL and initiates cell death Inhibition of death receptor signals by cellular FLIP The NF-kappa B and I kappa B proteins: new discoveries and insights
Pubertal delay in male nonhuman primates (Macaca mulatta) treated with methylphenidate	scientific article	en:Pubertal delay in male nonhuman primates (Macaca mulatta) treated with methylphenidate	2011-09-27		21930929	3182701	10.1073/pnas.1102187108	Narrative review: the role of leptin in human physiology: emerging clinical applications
Discovery of an ebolavirus-like filovirus in europe	scientific article	en:Discovery of an ebolavirus-like filovirus in europe	2011-10		22039362	3197594	10.1371/journal.ppat.1002304	Proposal for a revised taxonomy of the family Filoviridae: classification, names of taxa and viruses, and virus abbreviations Unexpected inheritance: multiple integrations of ancient bornavirus and ebolavirus/marburgvirus sequences in vertebrate genomes Filoviruses are ancient and integrated into mammalian genomes Large serological survey showing cocirculation of Ebola and Marburg viruses in Gabonese bat populations, and a high seroprevalence of both viruses in Rousettus aegyptiacus Isolation of genetically diverse Marburg viruses from Egyptian fruit bats Newly discovered ebola virus associated with hemorrhagic fever outbreak in Uganda Marburg virus infection detected in a common African bat Ecologic and geographic distribution of filovirus disease Experimental inoculation of plants and animals with Ebola virus
Population genetics of malaria resistance in humans	scientific article	en:Population genetics of malaria resistance in humans	2011-10	malaria	21427751	3182497	10.1038/hdy.2011.16	Widespread divergence between incipient Anopheles gambiae species revealed by whole genome sequences Origin of the human malaria parasite Plasmodium falciparum in gorillas The international limits and population at risk of Plasmodium vivax transmission in 2009 Evidence that adaptation in Drosophila is not limited by mutation at single sites Candidate malaria susceptibility/protective SNPs in hospital and population-based studies: the effect of sub-structuring Plasmodium vivax clinical malaria is commonly observed in Duffy-negative Malagasy people Genome-wide and fine-resolution association analysis of malaria in West Africa Plasmodium knowlesi malaria in humans is widely distributed and potentially life threatening TLR4 polymorphisms, infectious diseases, and evolutionary pressure during migration of modern humans Heritability of malaria in Africa How malaria has affected the human genome and what human genetics can teach us about malaria Sickle-cell anemia hemoglobin: the molecular biology of the first "molecular disease"--the crucial importance of serendipity Extended linkage disequilibrium surrounding the hemoglobin E variant due to malarial selection Protection afforded by sickle-cell trait against subtertian malareal infection Evidence for balancing selection from nucleotide sequence analyses of human G6PD Evolutionary and historical aspects of the burden of malaria Complex signatures of natural selection at the Duffy blood group locus Detection of the signature of natural selection in humans: evidence from the Duffy blood group locus Emergence of FY*A(null) in a Plasmodium vivax-endemic region of Papua New Guinea Protection against malaria morbidity: near-fixation of the alpha-thalassemia gene in a Nepalese population Deletion in erythrocyte band 3 gene in malaria-resistant Southeast Asian ovalocytosis
Oldest known pantherine skull and evolution of the tiger	scientific article	en:Oldest Known Pantherine Skull and Evolution of the Tiger	2011-10-10		22016768	3189913	10.1371/journal.pone.0025483	Mitochondrial phylogeography illuminates the origin of the extinct caspian tiger and its relationship to the amur tiger A primitive Late Pliocene cheetah, and evolution of the cheetah lineage Phylogeography and genetic ancestry of tigers (Panthera tigris)
Vaccines against malaria	Scientific Article about Malaria in Biological Sciences Journal	en:Vaccines against malaria	2011-10-12	malaria	21893544	3146776	10.1098/rstb.2011.0091	Efficacy of RTS,S/AS01E vaccine against malaria in children 5 to 17 months of age A malaria vaccine that elicits in humans antibodies able to kill Plasmodium falciparum
Toluene diisocyanate reactivity with glutathione across a vapor/liquid interface and subsequent transcarbamoylation of human albumin	scientific article	en:Toluene diisocyanate reactivity with glutathione across a vapor/liquid interface and subsequent transcarbamoylation of human albumin	2011-10-17		21806041	3321232	10.1021/tx2002433	Monoclonal antibodies against toluene diisocyanate haptenated proteins from vapor-exposed mice
The pore-forming toxin listeriolysin O mediates a novel entry pathway of L. monocytogenes into human hepatocytes	scientific article	en:The pore-forming toxin listeriolysin O mediates a novel entry pathway of L. monocytogenes into human hepatocytes	2011-11		22072970	3207921	10.1371/journal.ppat.1002356	Cholesterol-dependent cytolysins, a family of versatile pore-forming toxins Redefining cholesterol's role in the mechanism of the cholesterol-dependent cytolysins Actin filaments and the growth, movement, and spread of the intracellular bacterial parasite, Listeria monocytogenes
Gestational lead exposure selectively decreases retinal dopamine amacrine cells and dopamine content in adult mice	scientific article	en:Gestational lead exposure selectively decreases retinal dopamine amacrine cells and dopamine content in adult mice	2011-11-01		21703292	3205288	10.1016/j.taap.2011.05.021	Low-level gestational lead exposure increases retinal progenitor cell proliferation and rod photoreceptor and bipolar cell neurogenesis in mice Low-level human equivalent gestational lead exposure produces supernormal scotopic electroretinograms, increased retinal neurogenesis, and decreased retinal dopamine utilization in rats Mice deficient in TNF receptors are protected against dopaminergic neurotoxicity: Implications for Parkinson's disease
Recent clinical and molecular insights into emerging artemisinin resistance in Plasmodium falciparum	scientific article	en:Recent clinical and molecular insights into emerging artemisinin resistance in Plasmodium falciparum	2011-12	infectious disease	22001944	3268008	10.1097/QCO.0b013e32834cd3ed	Artemisinin-based combination therapies: a vital tool in efforts to eliminate malaria Changes in the treatment responses to artesunate-mefloquine on the northwestern border of Thailand during 13 years of continuous deployment A collaborative epidemiological investigation into the criminal fake artesunate trade in South East Asia
SAMHD1-deficient CD14+ cells from individuals with Aicardi-Goutières syndrome are highly susceptible to HIV-1 infection	scientific article	en:SAMHD1-deficient CD14+ cells from individuals with Aicardi-Goutières syndrome are highly susceptible to HIV-1 infection	2011-12	HIV	22174685	3234228	10.1371/journal.ppat.1002425	Vpx relieves inhibition of HIV-1 infection of macrophages mediated by the SAMHD1 protein SAMHD1 is the dendritic- and myeloid-cell-specific HIV-1 restriction factor counteracted by Vpx Inhibition of the type I interferon response in human dendritic cells by dengue virus infection requires a catalytically active NS2B3 complex Mutations involved in Aicardi-Goutières syndrome implicate SAMHD1 as regulator of the innate immune response The human immunodeficiency virus type 2 Vpx protein usurps the CUL4A-DDB1 DCAF1 ubiquitin ligase to overcome a postentry block in macrophage infection TRIM E3 ligases interfere with early and late stages of the retroviral life cycle
Intramodality and intermodality comparisons of storage phosphor computed radiography and conventional film-screen radiography in the recognition of small pneumoconiotic opacities	scientific article	en:Intramodality and intermodality comparisons of storage phosphor computed radiography and conventional film-screen radiography in the recognition of small pneumoconiotic opacities	2011-12		21622551	3231963	10.1378/chest.11-0629	Coal workers' pneumoconiosis and progressive massive fibrosis are increasingly more prevalent among workers in small underground coal mines in the United States Comparison of storage phosphor computed radiography with conventional film-screen radiography in the recognition of pneumoconiosis Rapidly progressive coal workers' pneumoconiosis in the United States: geographic clustering and other factors
At the lower size limit for tetrapods, two new species of the miniaturized frog genus Paedophryne (Anura, Microhylidae)	scientific article	en:At the lower size limit for tetrapods, two new species of the miniaturized frog genus Paedophryne (Anura, Microhylidae)	2011-12-12	Paedophryne dekot Paedophryne verrucosa	22287916	3238040	10.3897/zookeys.154.1963	Paedocypris, a new genus of Southeast Asian cyprinid fish with a remarkable sexual dimorphism, comprises the world's smallest vertebrate
Circular permutation in proteins	scientific article	en:Circular permutation in proteins	2012	circular permutation in proteins	22496628	3320104	10.1371/journal.pcbi.1002445	Quantitative in vivo solubility and reconstitution of truncated circular permutants of green fluorescent protein Experimental support for the evolution of symmetric protein architecture from a simple peptide motif Pre-calculated protein structure alignments at the RCSB PDB website CPDB: a database of circular permutation in proteins Backtracking on the folding landscape of the beta-trefoil protein interleukin-1beta? CPSARST: an efficient circular permutation search tool applied to the detection of novel protein structural relationships SISYPHUS--structural alignments for proteins with non-trivial relationships A short guided tour through functional and structural features of saposin-like proteins Sequence permutations in the molecular evolution of DNA methyltransferases Circularly permuted proteins in the protein structure database Random circular permutation leading to chain disruption within and near alpha helices in the catalytic chains of aspartate transcarbamoylase: effects on assembly, stability, and function Circular permutation of 5-aminolevulinate synthase. Mapping the polypeptide chain to its function In vivo formation of allosteric aspartate transcarbamoylase containing circularly permuted catalytic polypeptide chains: implications for protein folding and assembly Nicotinamide nucleotide transhydrogenase: a model for utilization of substrate binding energy for proton translocation The crystal structure of pea lectin at 3.0-A resolution
Understanding the population genetics of Plasmodium vivax is essential for malaria control and elimination	Scientific Article about Malaria from Malaria Journal	en:Understanding the population genetics of Plasmodium vivax is essential for malaria control and elimination	2012	infectious disease	22233585	3298510	10.1186/1475-2875-11-14	The international limits and population at risk of Plasmodium vivax transmission in 2009 Assembling a global database of malaria parasite prevalence for the Malaria Atlas Project Recombination hotspots and population structure in Plasmodium falciparum Practical PCR genotyping protocols for Plasmodium vivax using Pvcs and Pvmsp1
A systematic review of the safety and efficacy of artemether-lumefantrine against uncomplicated Plasmodium falciparum malaria during pregnancy	Scientific Article about Malaria from Malaria Journal	en:A systematic review of the safety and efficacy of artemether-lumefantrine against uncomplicated Plasmodium falciparum malaria during pregnancy	2012	infectious disease	22548983	3405476	10.1186/1475-2875-11-141	The clinical efficacy of artemether/lumefantrine (Coartem)
Malaria control in Bhutan: case study of a country embarking on elimination	Scientific Article about Malaria from Malaria Journal	en:Malaria control in Bhutan: case study of a country embarking on elimination	2012	infectious disease	22230355	3278342	10.1186/1475-2875-11-9	Malaria control in Bhutan: case study of a country embarking on elimination Establishing the extent of malaria transmission and challenges facing pre-elimination in the Republic of Djibouti Shrinking the malaria map: progress and prospects
Triclocarban mediates induction of xenobiotic metabolism through activation of the constitutive androstane receptor and the estrogen receptor alpha	scientific article	en:Triclocarban mediates induction of xenobiotic metabolism through activation of the constitutive androstane receptor and the estrogen receptor alpha	2012		22761658	3376094	10.1371/journal.pone.0037705	Investigation of human exposure to triclocarban after showering and preliminary evaluation of its biological effects In vitro biologic activities of the antimicrobials triclocarban, its analogs, and triclosan in bioassay screens: receptor-based bioassay screens Control of steroid, heme, and carcinogen metabolism by nuclear pregnane X receptor and constitutive androstane receptor Vitamin D receptor as an intestinal bile acid sensor Reciprocal activation of xenobiotic response genes by nuclear receptors SXR/PXR and CAR Androstane metabolites bind to and deactivate the nuclear receptor CAR-beta LXR, a nuclear receptor that defines a distinct retinoid response pathway
A new tetraploid species of Solanum L. sect. Solanum (Solanaceae) from Tanzania	scientific article	en:A new tetraploid species of Solanum L. sect. Solanum (Solanaceae) from Tanzania	2012		23233812	3492932	10.3897/phytokeys.16.2884	AFLP: a new technique for DNA fingerprinting
Rivaling the world's smallest reptiles: discovery of miniaturized and microendemic new species of leaf chameleons (Brookesia) from northern Madagascar	scientific article	en:Rivaling the world's smallest reptiles: discovery of miniaturized and microendemic new species of leaf chameleons (Brookesia) from northern Madagascar	2012		22348069	3279364	10.1371/journal.pone.0031314	CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
A new species of Euscorpius Thorell, 1876 (Scorpiones, Euscorpiidae) from Turkey	scientific article	en:A new species of Euscorpius Thorell, 1876 (Scorpiones, Euscorpiidae) from Turkey	2012		22977350	3433697	10.3897/zookeys.219.3597	A new species of Euscorpius Thorell, 1876 (Scorpiones, Euscorpiidae) from Turkey
Cuban Calisto (Lepidoptera, Nymphalidae, Satyrinae), a review based on morphological and DNA data	scientific article	en:Cuban Calisto (Lepidoptera, Nymphalidae, Satyrinae), a review based on morphological and DNA data	2012		22328857	3272634	10.3897/zookeys.165.2206	Timing major conflict between mitochondrial and nuclear genes in species relationships of Polygonia butterflies (Nymphalidae: Nymphalini) Ten species in one: DNA barcoding reveals cryptic species in the neotropical skipper butterfly Astraptes fulgerator Biological identifications through DNA barcodes
A new species of Schrankia Hübner, 1825 from China (Lepidoptera, Erebidae, Hypenodinae)	scientific article	en:A new species of Schrankia Hübner, 1825 from China (Lepidoptera, Erebidae, Hypenodinae)	2012		23378796	3561679	10.3897/zookeys.242.3856	Additions and corrections to the check list of the Noctuoidea (Insecta, Lepidoptera) of North America north of Mexico
An illustrated key to the genera and subgenera of the Recent azooxanthellate Scleractinia (Cnidaria, Anthozoa), with an attached glossary	scientific article	en:An illustrated key to the genera and subgenera of the Recent azooxanthellate Scleractinia (Cnidaria, Anthozoa), with an attached glossary	2012		23166463	3487648	10.3897/zookeys.227.3612	A comprehensive phylogenetic analysis of the Scleractinia (Cnidaria, Anthozoa) based on mitochondrial CO1 sequence data
Determining biophysical protein stability in lysates by a fast proteolysis assay, FASTpp	scientific article	en:Determining biophysical protein stability in lysates by a fast proteolysis assay, FASTpp	2012		23056252	3463568	10.1371/journal.pone.0046147	Messing up disorder: how do missense mutations in the tumor suppressor protein APC lead to cancer? α-Synuclein occurs physiologically as a helically folded tetramer that resists aggregation A peptide that binds and stabilizes p53 core domain: chaperone strategy for rescue of oncogenic mutants
Social implications of malaria and their relationships with poverty	scientific article	en:Social implications of malaria and their relationships with poverty	2012	malaria	22973492	3435125	10.4084/MJHID.2012.048	Hidden burden of malaria in Indian women
Clinical aspects of uncomplicated and severe malaria	scientific article	en:Clinical aspects of uncomplicated and severe malaria	2012	malaria	22708041	3375727	10.4084/MJHID.2012.026	Lung injury in vivax malaria: pathophysiological evidence for pulmonary vascular sequestration and posttreatment alveolar-capillary inflammation
Resistance to malaria in humans: the impact of strong, recent selection	scientific article	en:Resistance to malaria in humans: the impact of strong, recent selection	2012	infectious disease	23088866	3502258	10.1186/1475-2875-11-349	Global malaria mortality between 1980 and 2010: a systematic analysis Multiple independent introductions of Plasmodium falciparum in South America The global distribution of the Duffy blood group Population genetics of malaria resistance in humans A plethora of Plasmodium species in wild apes: a source of human infection? Global distribution of the sickle cell gene and geographical confirmation of the malaria hypothesis Origin of the human malaria parasite Plasmodium falciparum in gorillas How malaria has affected the human genome and what human genetics can teach us about malaria Extended linkage disequilibrium surrounding the hemoglobin E variant due to malarial selection Protection afforded by sickle-cell trait against subtertian malareal infection Evolutionary and historical aspects of the burden of malaria Detection of the signature of natural selection in humans: evidence from the Duffy blood group locus Emergence of FY*A(null) in a Plasmodium vivax-endemic region of Papua New Guinea Deletion in erythrocyte band 3 gene in malaria-resistant Southeast Asian ovalocytosis
Prevalence and clinical features of HIV and malaria co-infection in hospitalized adults in Beira, Mozambique	scientific article	en:Prevalence and clinical features of HIV and malaria co-infection in hospitalized adults in Beira, Mozambique	2012	infectious disease	22835018	3439710	10.1186/1475-2875-11-241	Potencies of human immunodeficiency virus protease inhibitors in vitro against Plasmodium falciparum and in vivo against murine malaria
Implementation of basic quality control tests for malaria medicines in Amazon Basin countries: results for the 2005-2010 period	scientific article	en:Implementation of basic quality control tests for malaria medicines in Amazon Basin countries: results for the 2005-2010 period	2012	infectious disease	22704680	3433375	10.1186/1475-2875-11-202	Antimalarial drug quality in the most severely malarious parts of Africa - a six country study
Treatment outcome of intravenous artesunate in patients with severe malaria in the Netherlands and Belgium	scientific article	en:Treatment outcome of intravenous artesunate in patients with severe malaria in the Netherlands and Belgium	2012	infectious disease	22462806	3364861	10.1186/1475-2875-11-102	Artesunate versus quinine in the treatment of severe falciparum malaria in African children (AQUAMAT): an open-label, randomised trial
The evolutionary host switches of Polychromophilus: a multi-gene phylogeny of the bat malaria genus suggests a second invasion of mammals by a haemosporidian parasite	scientific article	en:The evolutionary host switches of Polychromophilus: a multi-gene phylogeny of the bat malaria genus suggests a second invasion of mammals by a haemosporidian parasite	2012	infectious disease	22356874	3342143	10.1186/1475-2875-11-53	Episodic radiations in the fly tree of life Relaxed phylogenetics and dating with confidence
CYP450 phenotyping and accurate mass identification of metabolites of the 8-aminoquinoline, anti-malarial drug primaquine	scientific article	en:CYP450 phenotyping and accurate mass identification of metabolites of the 8-aminoquinoline, anti-malarial drug primaquine	2012	infectious disease	22856549	3438098	10.1186/1475-2875-11-259	Pharmacokinetics of primaquine in man. I. Studies of the absolute bioavailability and effects of dose size
A review of malaria vaccine clinical projects based on the WHO rainbow table	scientific article	en:A review of malaria vaccine clinical projects based on the WHO rainbow table	2012	infectious disease	22230255	3286401	10.1186/1475-2875-11-11	Safety and immunogenicity of a malaria vaccine, Plasmodium falciparum AMA-1/MSP-1 chimeric protein formulated in montanide ISA 720 in healthy adults A malaria vaccine that elicits in humans antibodies able to kill Plasmodium falciparum A randomised, double-blind, controlled vaccine efficacy trial of DNA/MVA ME-TRAP against malaria infection in Gambian adults
Analysis of variation at transcription factor binding sites in Drosophila and humans	scientific article	en:Analysis of variation at transcription factor binding sites in Drosophila and humans	2012		22950968	3491393	10.1186/gb-2012-13-9-r49	An integrated encyclopedia of DNA elements in the human genome Phased whole-genome genetic risk in a family quartet using a major allele reference sequence Does positive selection drive transcription factor binding site turnover? A test with Drosophila cis-regulatory modules A map of human genome variation from population-scale sequencing Dynamic evolution of precise regulatory encodings creates the clustered site signature of enhancers Five-vertebrate ChIP-seq reveals the evolutionary dynamics of transcription factor binding Evolution acts on enhancer organization to fine-tune gradient threshold readouts Transcription factors bind thousands of active and inactive regions in the Drosophila blastoderm Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes Position specific variation in the rate of evolution in transcription factor binding sites
Open by default: a proposed copyright license and waiver agreement for open access research and data in peer-reviewed journals	scientific article	en:Open by default: a proposed copyright license and waiver agreement for open access research and data in peer-reviewed journals	2012		22958225	3465200	10.1186/1756-0500-5-494	Why full open access matters Sharing research data to improve public health Computational morphometry for detecting changes in brain structure due to development, aging, learning, disease and evolution
New Dromaeosaurids (Dinosauria: Theropoda) from the lower cretaceous of Utah, and the evolution of the Dromaeosaurid tail	scientific article	en:New Dromaeosaurids (Dinosauria: Theropoda) from the lower cretaceous of Utah, and the evolution of the Dromaeosaurid tail	2012		22615813	3352940	10.1371/journal.pone.0036790	The predatory ecology of Deinonychus and the origin of flapping in birds A new troodontid theropod dinosaur from the lower Cretaceous of Utah New basal iguanodonts from the Cedar Mountain formation of Utah and the evolution of thumb-spiked dinosaurs A short-armed dromaeosaurid from the Jehol Group of China with implications for early dromaeosaurid evolution A microraptorine (Dinosauria-Dromaeosauridae) from the Late Cretaceous of North America A bizarre Cretaceous theropod dinosaur from Patagonia and the evolution of Gondwanan dromaeosaurids Dinosaur killer claws or climbing crampons?
The genome of the obligate intracellular parasite Trachipleistophora hominis: new insights into microsporidian genome dynamics and reductive evolution	scientific article	en:The genome of the obligate intracellular parasite Trachipleistophora hominis: new insights into microsporidian genome dynamics and reductive evolution	2012		23133373	3486916	10.1371/journal.ppat.1002979	Dicer recognizes the 5' end of RNA for efficient and accurate processing Database resources of the National Center for Biotechnology Information The complete sequence of the smallest known nuclear genome from the microsporidian Encephalitozoon intestinalis The reduced genome of the parasitic microsporidian Enterocytozoon bieneusi lacks genes for core carbon metabolism The Pfam protein families database Draft genome sequence of the Daphnia pathogen Octosporea bayeri: insights into the gene content of a large microsporidian genome and a model for host-parasite interactions Genomic analyses of the microsporidian Nosema ceranae, an emergent pathogen of honey bees Evolution of pathogenicity and sexual reproduction in eight Candida genomes SHRiMP: accurate mapping of short color-space reads Genomic survey of the non-cultivatable opportunistic human pathogen, Enterocytozoon bieneusi The Transporter Classification Database: recent advances SMART 6: recent updates and new developments Microsporidia evolved from ancestral sexual fungi The evolution of RNAi as a defence against viruses and transposable elements Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis NCBI reference sequences (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins MEME: discovering and analyzing DNA and protein sequence motifs metaSHARK: software for automated metabolic network prediction from DNA sequence and its application to the genomes of Plasmodium falciparum and Eimeria tenella Enzyme-specific profiles for genome annotation: PRIAM The COG database: an updated version includes eukaryotes The TIGRFAMs database of protein families The Protein Data Bank KEGG: Kyoto Encyclopedia of Genes and Genomes Prefoldin, a chaperone that delivers unfolded proteins to cytosolic chaperonin Major facilitator superfamily
Vaccines: from empirical development to rational design	scientific article	en:Vaccines: from empirical development to rational design	2012		23144616	3493475	10.1371/journal.ppat.1003001	Unbiased reconstruction of a mammalian transcriptional network mediating pathogen responses Strategies and mechanisms for host and pathogen survival in acute and persistent viral infections A Toll-like receptor recognizes bacterial DNA
Emerging roles for the influenza A virus nuclear export protein (NEP)	scientific article	en:Emerging roles for the influenza A virus nuclear export protein (NEP)	2012		23236273	3516560	10.1371/journal.ppat.1003019	Structural basis for leucine-rich nuclear export signal recognition by CRM1 Genomic signatures of human versus avian influenza A viruses Influenza virus PB1-F2 protein induces cell death through mitochondrial ANT3 and VDAC1 MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform
Lactic acid bacteria convert human fibroblasts to multipotent cells	scientific article	en:Lactic acid bacteria convert human fibroblasts to multipotent cells	2012		23300571	3530539	10.1371/journal.pone.0051866	Multilineage-differentiating stress-enduring (Muse) cells are a primary source of induced pluripotent stem cells in human fibroblasts Unique multipotent cells in adult human mesenchymal cell populations Core transcriptional regulatory circuitry in human embryonic stem cells Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya
Early Neolithic water wells reveal the world's oldest wood architecture	scientific article	en:Early Neolithic water wells reveal the world's oldest wood architecture	2012		23284685	3526582	10.1371/journal.pone.0051374	Ancient DNA from European early neolithic farmers reveals their near eastern affinities
Chemoinformatic analysis of GRAS (Generally Recognized as Safe) flavor chemicals and natural products	scientific article	en:Chemoinformatic analysis of GRAS (Generally Recognized as Safe) flavor chemicals and natural products	2012		23226386	3511266	10.1371/journal.pone.0050798	DrugBank: a knowledgebase for drugs, drug actions and drug targets
Methamphetamine administration targets multiple immune subsets and induces phenotypic alterations suggestive of immunosuppression	scientific article	en:Methamphetamine administration targets multiple immune subsets and induces phenotypic alterations suggestive of immunosuppression	2012		23227154	3515581	10.1371/journal.pone.0049897	Identification of splenic reservoir monocytes and their deployment to inflammatory sites Methamphetamine toxicity and messengers of death Methamphetamine inhibits antigen processing, presentation, and phagocytosis Trends in production, trafficking, and consumption of methamphetamine and cocaine in Mexico Killer cell lectin-like receptor G1 binds three members of the classical cadherin family to inhibit NK cell cytotoxicity
Fetal alcohol exposure and IQ at age 8: evidence from a population-based birth-cohort study	scientific article	en:Fetal alcohol exposure and IQ at age 8: evidence from a population-based birth-cohort study	2012		23166662	3498109	10.1371/journal.pone.0049407	Associations of ADH and ALDH2 gene variation with self report alcohol reactions, consumption and dependence: an integrated analysis A global perspective on genetic variation at the ADH genes reveals unusual patterns of linkage disequilibrium and diversity
Kretzoiarctos gen. nov., the oldest member of the giant panda clade	scientific article	en:Kretzoiarctos gen. nov., the oldest member of the giant panda clade	2012		23155439	3498366	10.1371/journal.pone.0048985	Updated chronology for the Miocene hominoid radiation in Western Eurasia Mitochondrial genomes reveal an explosive radiation of extinct and extant bears near the Miocene-Pliocene boundary The first skull of the earliest giant panda
North African populations carry the signature of admixture with Neandertals	scientific article	en:North African populations carry the signature of admixture with Neandertals	2012		23082212	3474783	10.1371/journal.pone.0047765	The date of interbreeding between Neandertals and modern humans A high-coverage genome sequence from an archaic Denisovan individual Genomic ancestry of North Africans supports back-to-Africa migrations Denisova admixture and the first modern human dispersals into Southeast Asia and Oceania Genetic evidence for archaic admixture in Africa The shaping of modern human immune systems by multiregional admixture with archaic humans Genetic history of an archaic hominin group from Denisova Cave in Siberia Reconstructing Indian population history Genes mirror geography within Europe
The first mitochondrial genome for the fishfly subfamily Chauliodinae and implications for the higher phylogeny of Megaloptera	scientific article	en:The first mitochondrial genome for the fishfly subfamily Chauliodinae and implications for the higher phylogeny of Megaloptera	2012		23056623	3467237	10.1371/journal.pone.0047302	Episodic radiations in the fly tree of life Mitochondrial genome sequences effectively reveal the phylogeny of Hylobates gibbons 9-genes reinforce the phylogeny of holometabola and yield alternate views on the phylogenetic placement of Strepsiptera Mitochondrial genomes suggest that hexapods and crustaceans are mutually paraphyletic PHYML Online--a web server for fast maximum likelihood-based phylogenetic inference The comparative RNA web (CRW) site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs The CLUSTAL X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence
A new rhynchocephalian from the late jurassic of Germany with a dentition that is unique amongst tetrapods	scientific article	en:A new rhynchocephalian from the late jurassic of Germany with a dentition that is unique amongst tetrapods	2012		23118861	3485277	10.1371/journal.pone.0046839	A sphenodontine (Rhynchocephalia) from the Miocene of New Zealand and palaeobiogeography of the tuatara (Sphenodon)
Testosterone administration reduces lying in men	scientific article	en:Testosterone administration reduces lying in men	2012		23071635	3468628	10.1371/journal.pone.0046774	Testosterone administration decreases generosity in the ultimatum game
Framing the Salmonidae family phylogenetic portrait: a more complete picture from increased taxon sampling	scientific article	en:Framing the Salmonidae family phylogenetic portrait: a more complete picture from increased taxon sampling	2012		23071608	3465342	10.1371/journal.pone.0046662	Nine exceptional radiations plus high turnover explain species diversity in jawed vertebrates A salmonid EST genomic study: genes, duplications, phylogeny and microarrays Model selection and model averaging in phylogenetics: advantages of akaike information criterion and bayesian approaches over likelihood ratio tests CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
Earliest porotic hyperostosis on a 1.5-million-year-old hominin, olduvai gorge, Tanzania	scientific article	en:Earliest porotic hyperostosis on a 1.5-million-year-old hominin, olduvai gorge, Tanzania	2012		23056303	3463614	10.1371/journal.pone.0046414	Diet of Paranthropus boisei in the early Pleistocene of East Africa
Gavialis from the Pleistocene of Thailand and its relevance for drainage connections from India to Java	scientific article	en:Gavialis from the Pleistocene of Thailand and its relevance for drainage connections from India to Java	2012		23028557	3445548	10.1371/journal.pone.0044541	A gharial from the Oligocene of Puerto Rico: transoceanic dispersal in the history of a non-marine reptile
The forgotten role of alcohol: a systematic review and meta-analysis of the clinical efficacy and perceived role of chlorhexidine in skin antisepsis	scientific article	en:The forgotten role of alcohol: a systematic review and meta-analysis of the clinical efficacy and perceived role of chlorhexidine in skin antisepsis	2012		22984485	3434203	10.1371/journal.pone.0044277	Effects of preoperative skin preparation on postoperative wound infection rates: a prospective study of 3 skin preparation protocols The PRISMA statement for reporting systematic reviews and meta-analyses of studies that evaluate health care interventions: explanation and elaboration Insufficient neutralization in testing a chlorhexidine-containing ethanol-based hand rub can result in a false positive efficacy assessment THE ENVIRONMENT AND DISEASE: ASSOCIATION OR CAUSATION?
Intestinal tissues induce an SNP mutation in Pseudomonas aeruginosa that enhances its virulence: possible role in anastomotic leak	scientific article	en:Intestinal tissues induce an SNP mutation in Pseudomonas aeruginosa that enhances its virulence: possible role in anastomotic leak	2012		22952955	3432121	10.1371/journal.pone.0044326	The RAST Server: rapid annotations using subsystems technology
Lesula: a new species of Cercopithecus monkey endemic to the Democratic Republic of Congo and implications for conservation of Congo's central basin	scientific article	en:Lesula: a new species of Cercopithecus monkey endemic to the Democratic Republic of Congo and implications for conservation of Congo's central basin	2012		22984482	3440422	10.1371/journal.pone.0044271	Relaxed phylogenetics and dating with confidence
The first record of a trans-oceanic sister-group relationship between obligate vertebrate troglobites	scientific article	en:The first record of a trans-oceanic sister-group relationship between obligate vertebrate troglobites	2012		22937155	3429432	10.1371/journal.pone.0044083	Global biodiversity and phylogenetic evaluation of remipedia (crustacea) MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform
Abdominal contents from two large early cretaceous compsognathids (Dinosauria: Theropoda) demonstrate feeding on confuciusornithids and dromaeosaurids	scientific article	en:Abdominal contents from two large early cretaceous compsognathids (Dinosauria: Theropoda) demonstrate feeding on confuciusornithids and dromaeosaurids	2012		22952855	3430630	10.1371/journal.pone.0044012	A short-armed dromaeosaurid from the Jehol Group of China with implications for early dromaeosaurid evolution
Early invasion of brain parenchyma by African trypanosomes	scientific article	en:Early invasion of brain parenchyma by African trypanosomes	2012		22952808	3432051	10.1371/journal.pone.0043913	Release of hepatic Plasmodium yoelii merozoites into the pulmonary microvasculature Intravital observation of Plasmodium berghei sporozoite infection of the liver The blood-brain barrier: bottleneck in brain drug development
Rediscovery of Leptoxis compacta (Anthony, 1854) (Gastropoda: Cerithioidea: Pleuroceridae)	scientific article	en:Rediscovery of Leptoxis compacta (Anthony, 1854) (Gastropoda: Cerithioidea: Pleuroceridae)	2012		22905139	3414462	10.1371/journal.pone.0042499	Conservation genetics of a critically endangered limpet genus and rediscovery of an extinct species
Association of the maternal MTHFR C677T polymorphism with susceptibility to neural tube defects in offsprings: evidence from 25 case-control studies	scientific article	en:Association of the maternal MTHFR C677T polymorphism with susceptibility to neural tube defects in offsprings: evidence from 25 case-control studies	2012		23056169	3463537	10.1371/journal.pone.0041689	The "thermolabile" variant of methylenetetrahydrofolate reductase and neural tube defects: An evaluation of genetic risk and the relative importance of the genotypes of the embryo and the mother Bias in meta-analysis detected by a simple, graphical test
Prior knowledge, older age, and higher allowance are risk factors for self-medication with antibiotics among university students in southern China	scientific article	en:Prior knowledge, older age, and higher allowance are risk factors for self-medication with antibiotics among university students in southern China	2012		22911779	3401104	10.1371/journal.pone.0041314	Emergence of a new antibiotic resistance mechanism in India, Pakistan, and the UK: a molecular, biological, and epidemiological study Self-medication with antibiotics in rural population in Greece: a cross-sectional multicenter study
Ancient migratory events in the Middle East: new clues from the Y-chromosome variation of modern Iranians	scientific article	en:Ancient migratory events in the Middle East: new clues from the Y-chromosome variation of modern Iranians	2012		22815981	3399854	10.1371/journal.pone.0041252	In search of the genetic footprints of Sumerians: a survey of Y-chromosome and mtDNA variation in the Marsh Arabs of Iraq Y-chromosome variation in Altaian Kazakhs reveals a common paternal gene pool for Kazakhs and the influence of Mongolian expansions The coming of the Greeks to Provence and Corsica: Y-chromosome models of archaic Greek colonization of the western Mediterranean A major Y-chromosome haplogroup R1b Holocene era founder effect in Central and Western Europe A predominantly neolithic origin for European paternal lineages Human Y chromosome haplogroup R-V88: a paternal genetic record of early mid Holocene trans-Saharan connections and the spread of Chadic languages Separating the post-Glacial coancestry of European and Asian Y chromosomes within haplogroup R1a The emergence of Y-chromosome haplogroup J1e among Arabic-speaking populations Saudi Arabian Y-Chromosome diversity and its relationship with nearby regions Correcting for purifying selection: an improved human mitochondrial molecular clock Y-chromosomal evidence of the cultural diffusion of agriculture in Southeast Europe New binary polymorphisms reshape and increase resolution of the human Y chromosomal haplogroup tree Revealing the prehistoric settlement of Australia by Y chromosome and mtDNA analysis Polarity and temporality of high-resolution y-chromosome distributions in India identify both indigenous and exogenous expansions and reveal minor genetic influence of Central Asian pastoralists A predominantly neolithic origin for Y-chromosomal DNA variation in North Africa Origin, diffusion, and differentiation of Y-chromosome haplogroups E and J: inferences on the neolithization of Europe and later migratory events in the Mediterranean area The Levant versus the Horn of Africa: evidence for bidirectional corridors of human migrations The effective mutation rate at Y chromosome short tandem repeats, with application to human population-divergence time The genetic heritage of the earliest settlers persists both in Indian tribal and caste populations A nomenclature system for the tree of human Y-chromosomal binary haplogroups Ethiopians and Khoisan share the deepest clades of the human Y-chromosome phylogeny The Eurasian heartland: a continental perspective on Y-chromosome diversity Y-chromosome lineages trace diffusion of people and languages in southwestern Asia Population genetic implications from sequence variation in four Y chromosome genes Jewish and Middle Eastern non-Jewish populations share a common pool of Y-chromosome biallelic haplotypes Y-Chromosome evidence for a northward migration of modern humans into Eastern Asia during the last Ice Age Mitochondrial portraits of human populations using median networks Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data
Emergence of a novel avian pox disease in British tit species	scientific article	en:Emergence of a novel avian pox disease in British tit species	2012		23185231	3504035	10.1371/journal.pone.0040176	Emerging infectious disease leads to rapid population declines of common British birds
The completeness of the fossil record of mesozoic birds: implications for early avian evolution	scientific article	en:The completeness of the fossil record of mesozoic birds: implications for early avian evolution	2012		22761723	3382576	10.1371/journal.pone.0039056	Likelihood reinstates Archaeopteryx as a primitive bird Insight into diversity, body size and morphological evolution from the largest Early Cretaceous enantiornithine bird Strong mitochondrial DNA support for a Cretaceous origin of modern avian lineages Nuclear DNA does not reconcile 'rocks' and 'clocks' in Neoaves: a comment on Ericson et al Diversification of Neoaves: integration of molecular sequence data and fossils Discovery of an ornithurine bird and its implication for Early Cretaceous avian radiation
A new non-pterodactyloid pterosaur from the Late Jurassic of southern Germany	scientific article	en:A new non-pterodactyloid pterosaur from the Late Jurassic of southern Germany	2012		22792168	3390345	10.1371/journal.pone.0039312	Life history of Rhamphorhynchus inferred from bone histology and the diversity of pterosaurian growth strategies The extent of the preserved feathers on the four-winged dinosaur Microraptor gui under ultraviolet light Evidence for modular evolution in a long-tailed pterosaur with a pterodactyloid skull Respiratory evolution facilitated the origin of pterosaur flight and aerial gigantism Discovery of a rare arboreal forest-dwelling flying reptile (Pterosauria, Pterodactyloidea) from China
Thermostable DNA polymerase from a viral metagenome is a potent RT-PCR enzyme	scientific article	en:Thermostable DNA polymerase from a viral metagenome is a potent RT-PCR enzyme	2012		22675552	3366922	10.1371/journal.pone.0038371	Quantitative comparison of EST libraries requires compensation for systematic biases in cDNA generation PCR inhibition by reverse transcriptase leads to an overestimation of amplification efficiency Isothermal reactions for the amplification of oligonucleotides Loop-mediated isothermal amplification of DNA Chemotactic properties of angiopoietin-1 and -2, ligands for the endothelial-specific receptor tyrosine kinase Tie2 PCR fidelity of pfu DNA polymerase and other thermostable DNA polymerases
Theropod fauna from southern Australia indicates high polar diversity and climate-driven dinosaur provinciality	scientific article	en:Theropod fauna from southern Australia indicates high polar diversity and climate-driven dinosaur provinciality	2012		22615916	3353904	10.1371/journal.pone.0037122	New Mid-Cretaceous (latest Albian) dinosaurs fromWinton, Queensland, Australia A longirostrine tyrannosauroid from the Early Cretaceous of China Evidence for avian intrathoracic air sacs in a new predatory dinosaur from Argentina Crocodyliform biogeography during the Cretaceous: evidence of Gondwanan vicariance from biogeographical analysis New dinosaurs link southern landmasses in the Mid-Cretaceous
Microsatellite and mitochondrial data provide evidence for a single major introduction for the Neartic leafhopper Scaphoideus titanus in Europe	scientific article	en:Microsatellite and mitochondrial data provide evidence for a single major introduction for the Neartic leafhopper Scaphoideus titanus in Europe	2012		22629338	3356346	10.1371/journal.pone.0036882	Bridgehead effect in the worldwide invasion of the biocontrol harlequin ladybird The evolutionary impact of invasive species Inference of population structure using multilocus genotype data Description and power analysis of two tests for detecting recent population bottlenecks from allele frequency data
Global diversity and phylogeny of the Asteroidea (Echinodermata)	scientific article	en:Global diversity and phylogeny of the Asteroidea (Echinodermata)	2012		22563389	3338738	10.1371/journal.pone.0035644	Elevated water temperature and carbon dioxide concentration increase the growth of a keystone echinoderm
Limited genetic diversity preceded extinction of the Tasmanian tiger	scientific article	en:Limited genetic diversity preceded extinction of the Tasmanian tiger	2012		22530022	3329426	10.1371/journal.pone.0035433	The mitochondrial genome sequence of the Tasmanian tiger (Thylacinus cynocephalus) Resurrection of DNA function in vivo from an extinct genome Transmission of a fatal clonal tumor by biting occurs due to depleted MHC diversity in a threatened carnivorous marsupial A detailed picture of the origin of the Australian dingo, obtained from the study of mitochondrial DNA Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
Antibiotic resistance is prevalent in an isolated cave microbiome	scientific article	en:Antibiotic resistance is prevalent in an isolated cave microbiome	2012		22509370	3324550	10.1371/journal.pone.0034953	Sublethal antibiotic treatment leads to multidrug resistance via radical-induced mutagenesis Inhibition of mutation and combating the evolution of antibiotic resistance
Going solo: discovery of the first parthenogenetic gordiid (Nematomorpha: Gordiida)	scientific article	en:Going solo: discovery of the first parthenogenetic gordiid (Nematomorpha: Gordiida)	2012		22529916	3329510	10.1371/journal.pone.0034472	Windows .NET Network Distributed Basic Local Alignment Search Toolkit (W.ND-BLAST) The evolutionary advantage of recombination
The multipartite mitochondrial genome of Liposcelis bostrychophila: insights into the evolution of mitochondrial genomes in bilateral animals	scientific article	en:The multipartite mitochondrial genome of Liposcelis bostrychophila: insights into the evolution of mitochondrial genomes in bilateral animals	2012		22479490	3316519	10.1371/journal.pone.0033973	The single mitochondrial chromosome typical of animals has evolved into 18 minichromosomes in the human body louse, Pediculus humanus Multiple origins of parasitism in lice Organization of the mitochondrial genomes of whiteflies, aphids, and psyllids (Hemiptera, Sternorrhyncha) The CLUSTAL X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence
A revision of male ants of the Malagasy Amblyoponinae (Hymenoptera: Formicidae) with resurrections of the genera Stigmatomma and Xymmer	scientific article	en:A revision of male ants of the Malagasy Amblyoponinae (Hymenoptera: Formicidae) with resurrections of the genera Stigmatomma and Xymmer	2012		22496722	3320654	10.1371/journal.pone.0033325	Evaluating alternative hypotheses for the early evolution and diversification of ants
New insights into the skull of Istiodactylus latidens (Ornithocheiroidea, Pterodactyloidea)	scientific article	en:New insights into the skull of Istiodactylus latidens (Ornithocheiroidea, Pterodactyloidea)	2012		22470442	3310040	10.1371/journal.pone.0033170	Evidence for modular evolution in a long-tailed pterosaur with a pterodactyloid skull
Uncoupling protein-4 (UCP4) increases ATP supply by interacting with mitochondrial Complex II in neuroblastoma cells	scientific article	en:Uncoupling protein-4 (UCP4) increases ATP supply by interacting with mitochondrial Complex II in neuroblastoma cells	2012		22427795	3303587	10.1371/journal.pone.0032810	UCP4, a novel brain-specific mitochondrial protein that reduces membrane potential in mammalian cells
Nicotine-like effects of the neonicotinoid insecticides acetamiprid and imidacloprid on cerebellar neurons from neonatal rats	scientific article	en:Nicotine-like effects of the neonicotinoid insecticides acetamiprid and imidacloprid on cerebellar neurons from neonatal rats	2012		22393406	3290564	10.1371/journal.pone.0032432	Prevalence of maternal smoking and environmental tobacco smoke exposure during pregnancy and impact on birth weight: retrospective study using Millennium Cohort
A rapid FACS-based strategy to isolate human gene knockin and knockout clones	scientific article	en:A rapid FACS-based strategy to isolate human gene knockin and knockout clones	2012		22393430	3290580	10.1371/journal.pone.0032646	Systematic analysis of human protein complexes identifies chromosome segregation proteins Facile methods for generating human somatic cell gene knockouts using recombinant adeno-associated viruses Assembly of CENP-A into centromeric chromatin requires a cooperative array of nucleosomal DNA contact sites Human CENP-A contains a histone H3 related histone fold domain that is required for targeting to the centromere
Food chain transport of nanoparticles affects behaviour and fat metabolism in fish	scientific article	en:Food chain transport of nanoparticles affects behaviour and fat metabolism in fish	2012		22384193	3284555	10.1371/journal.pone.0032254	Distribution of nanoparticles in the see-through medaka (Oryzias latipes) Manufactured nanomaterials (fullerenes, C60) induce oxidative stress in the brain of juvenile largemouth bass
Higher level phylogeny and the first divergence time estimation of Heteroptera (Insecta: Hemiptera) based on multiple genes	scientific article	en:Higher level phylogeny and the first divergence time estimation of Heteroptera (Insecta: Hemiptera) based on multiple genes	2012		22384163	3288068	10.1371/journal.pone.0032152	Episodic radiations in the fly tree of life The CLUSTAL X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
Anatomy and cranial functional morphology of the small-bodied dinosaur Fruitadens haagarorum from the Upper Jurassic of the USA	scientific article	en:Anatomy and cranial functional morphology of the small-bodied dinosaur Fruitadens haagarorum from the Upper Jurassic of the USA	2012		22509242	3324477	10.1371/journal.pone.0031556	Lower limits of ornithischian dinosaur body size inferred from a new Upper Jurassic heterodontosaurid from North America A primitive ornithischian dinosaur from the Late Triassic of South Africa, and the early evolution and diversification of Ornithischia A basal ceratopsian with transitional features from the Late Jurassic of northwestern China
New specimens of Nemegtomaia from the Baruungoyot and Nemegt Formations (Late Cretaceous) of Mongolia	scientific article	en:New specimens of Nemegtomaia from the Baruungoyot and Nemegt Formations (Late Cretaceous) of Mongolia	2012		22347465	3275628	10.1371/journal.pone.0031330	Growth patterns in brooding dinosaurs reveals the timing of sexual maturity in non-avian dinosaurs and genesis of the avian condition
Repeated parallel evolution of parental care strategies within Xenotilapia, a genus of cichlid fishes from Lake Tanganyika	scientific article	en:Repeated parallel evolution of parental care strategies within Xenotilapia, a genus of cichlid fishes from Lake Tanganyika	2012		22347454	3275620	10.1371/journal.pone.0031236	Nuclear and mitochondrial data reveal different evolutionary processes in the Lake Tanganyika cichlid genus Tropheus Q24804511 AFLP: a new technique for DNA fingerprinting Mathematical model for studying genetic variation in terms of restriction endonucleases
Human remains from the Pleistocene-Holocene transition of southwest China suggest a complex evolutionary history for East Asians	scientific article	en:Human remains from the Pleistocene-Holocene transition of southwest China suggest a complex evolutionary history for East Asians	2012		22431968	3303470	10.1371/journal.pone.0031918	The Later Stone Age calvaria from Iwo Eleru, Nigeria: morphology and chronology Denisova admixture and the first modern human dispersals into Southeast Asia and Oceania The shaping of modern human immune systems by multiregional admixture with archaic humans Genetic history of an archaic hominin group from Denisova Cave in Siberia European early modern humans and the fate of the Neandertals An early modern human from Tianyuan Cave, Zhoukoudian, China
A new eusuchian crocodyliform with novel cranial integument and its significance for the origin and evolution of Crocodylia	scientific article	en:A new eusuchian crocodyliform with novel cranial integument and its significance for the origin and evolution of Crocodylia	2012		22303441	3269432	10.1371/journal.pone.0030471	A new pterosaur (Pterodactyloidea: Azhdarchidae) from the Upper Cretaceous of Morocco Crocodyliform biogeography during the Cretaceous: evidence of Gondwanan vicariance from biogeographical analysis
Insights into the ecology and evolutionary success of crocodilians revealed through bite-force and tooth-pressure experimentation	scientific article	en:Insights into the ecology and evolutionary success of crocodilians revealed through bite-force and tooth-pressure experimentation	2012		22431965	3303775	10.1371/journal.pone.0031781	A new horned crocodile from the Plio-Pleistocene hominid sites at Olduvai Gorge, Tanzania
Implications of extreme life span in clonal organisms: millenary clones in meadows of the threatened seagrass Posidonia oceanica	scientific article	en:Implications of extreme life span in clonal organisms: millenary clones in meadows of the threatened seagrass Posidonia oceanica	2012		22312426	3270012	10.1371/journal.pone.0030454	Rates of spontaneous mutation
Circadian patterns of Wikipedia editorial activity: a demographic analysis	scientific article	en:Circadian patterns of Wikipedia editorial activity: a demographic analysis	2012		22272279	3260192	10.1371/journal.pone.0030091	Dynamics of conflicts in Wikipedia
Late replication domains in polytene and non-polytene cells of Drosophila melanogaster	scientific article	en:Late replication domains in polytene and non-polytene cells of Drosophila melanogaster	2012		22253867	3254639	10.1371/journal.pone.0030035	Drosophila double parked: a conserved, essential replication protein that colocalizes with the origin recognition complex and links DNA replication with mitosis and the down-regulation of S phase transcripts
A new threat to honey bees, the parasitic phorid fly Apocephalus borealis	scientific article	en:A new threat to honey bees, the parasitic phorid fly Apocephalus borealis	2012		22235317	3250467	10.1371/journal.pone.0029639	Temporal analysis of the honey bee microbiome reveals four novel viruses and seasonal prevalence of known viruses, Nosema, and Crithidia Changes in transcript abundance relating to colony collapse disorder in honey bees (Apis mellifera) Colony collapse disorder: a descriptive study Modulation of social interactions by immune stimulation in honey bee, Apis mellifera, workers Does pathogen spillover from commercially reared bumble bees threaten wild pollinators? What's killing American honey bees? Prevalence and transmission of honeybee viruses Cluster analysis and display of genome-wide expression patterns
A new stalked filter-feeder from the middle Cambrian Burgess Shale, British Columbia, Canada	scientific article	en:A new stalked filter-feeder from the middle Cambrian Burgess Shale, British Columbia, Canada	2012		22279532	3261148	10.1371/journal.pone.0029233	Tentaculate fossils from the Cambrian of Canada (British Columbia) and China (Yunnan) interpreted as primitive deuterostomes The first tunicate from the Early Cambrian of South China
Recombinant vesicular stomatitis virus vaccine vectors expressing filovirus glycoproteins lack neurovirulence in nonhuman primates	scientific article	en:Recombinant vesicular stomatitis virus vaccine vectors expressing filovirus glycoproteins lack neurovirulence in nonhuman primates	2012	infectious disease	22448291	3308941	10.1371/journal.pntd.0001567	Mucosal immunization of cynomolgus macaques with the VSVDeltaG/ZEBOVGP vaccine stimulates strong ebola GP-specific immune responses Vesicular stomatitis virus-based ebola vaccine is well-tolerated and protects immunocompromised nonhuman primates Newly discovered ebola virus associated with hemorrhagic fever outbreak in Uganda Effective post-exposure treatment of Ebola infection
Simulations of long-term community dynamics in coral reefs--how perturbations shape trajectories	scientific article	en:Simulations of long-term community dynamics in coral reefs--how perturbations shape trajectories	2012		23209397	3510096	10.1371/journal.pcbi.1002791	Rethinking ecosystem resilience in the face of climate change
From dynamic expression patterns to boundary formation in the presomitic mesoderm	scientific article	en:From dynamic expression patterns to boundary formation in the presomitic mesoderm	2012		22761566	3386180	10.1371/journal.pcbi.1002586	The cyclic gene Hes1 contributes to diverse differentiation responses of embryonic stem cells Wnt/beta-catenin signaling: components, mechanisms, and diseases Dual regulation of Snail by GSK-3beta-mediated phosphorylation in control of epithelial-mesenchymal transition Transcriptional oscillation of lunatic fringe is essential for somitogenesis Hes7: a bHLH-type repressor gene regulated by Notch and expressed in the presomitic mesoderm Structure, chromosomal locus, and promoter analysis of the gene encoding the mouse helix-loop-helix factor HES-1. Negative autoregulation through the multiple N box elements
The date of interbreeding between Neandertals and modern humans	scientific article	en:The date of interbreeding between Neandertals and modern humans	2012		23055938	3464203	10.1371/journal.pgen.1002947	The history of African gene flow into Southern Europeans, Levantines, and Jews Genetic history of an archaic hominin group from Denisova Cave in Siberia A map of human genome variation from population-scale sequencing Out of Africa: modern human origins special feature: the origin of Neandertals Sensitive detection of chromosomal segments of distinct ancestry in admixed populations Detecting ancient admixture and estimating demographic parameters in multiple human populations The genetic structure and history of Africans and African Americans Mapping short DNA sequencing reads and calling variants using mapping quality scores A complete Neandertal mitochondrial genome sequence determined by high-throughput sequencing Population genetic analysis of the N-acylsphingosine amidohydrolase gene associated with mental activity in humans Evidence that the adaptive allele of the brain size gene microcephalin introgressed into Homo sapiens from an archaic Homo lineage Possible ancestral structure in human populations Deciphering the ancient and complex evolutionary history of human arylamine N-acetyltransferase genes Fixation of the human-specific CMP-N-acetylneuraminic acid hydroxylase pseudogene and implications of haplotype diversity for human evolution Deep haplotype divergence and long-range linkage disequilibrium at xp21.1 provide evidence that humans descend from a structured ancestral population Modern humans did not admix with Neanderthals during their range expansion into Europe No evidence of Neandertal mtDNA contribution to early modern humans X chromosome evidence for ancient human histories
Genetic characterization of Zika virus strains: geographic expansion of the Asian lineage	scientific article	en:Genetic characterization of Zika virus strains: geographic expansion of the Asian lineage	2012	infectious disease Zika virus Zika fever	22389730	3289602	10.1371/journal.pntd.0001477	Zika virus. I. Isolations and serological specificity Twelve isolations of Zika virus from Aedes (Stegomyia) africanus (Theobald) taken in and above a Uganda forest A simple technique for infection of mosquitoes with viruses; transmission of Zika virus A yellow fever epizootic in Zika Forest, Uganda, during 1972: Part 2: Monkey serology Yellow fever and Zika virus epizootics and enzootics in Uganda Zika Virus Outbreak on Yap Island, Federated States of Micronesia A sero-epidemiological survey for certain arboviruses (Togaviridae) in Pakistan Zika Virus Infection in Man Laboratory infection with Zika virus after vaccination against yellow fever Zika virus, a cause of fever in Central Java, Indonesia Probable non-vector-borne transmission of Zika virus, Colorado, USA Zika virus infection, Cambodia, 2010 Full-length sequencing and genomic characterization of Bagaza, Kedougou, and Zika viruses Genetic and serologic properties of Zika virus associated with an epidemic, Yap State, Micronesia, 2007 The flaviviruses (group B arboviruses): a cross-neutralization study Phylogeny of the genus Flavivirus Genomics and evolution of Aedes-borne flaviviruses Chikungunya and dengue: a case of mistaken identity? Transoceanic flight of mosquitoes on the Northwest Pacific West Nile virus envelope proteins: nucleotide sequence analysis of strains differing in mouse neuroinvasiveness Isolation of Zika virus from Aedes aegypti mosquitoes in Malaysia Sylvatic transmission of arboviruses among Bornean orangutans Neutralizing antibodies against arthropod-borne viruses in the sera of long-time residents of Malaya and Borneo One-step RT-PCR for detection of Zika virus Silent circulation of arboviruses in Cameroon Serological survey for the prevalence of certain arboviruses in the human population of the south-east area of Central African Republic Investigation surrounding a fatal case of yellow fever in Côte d'Ivoire in 1999 Immunity to certain arthropod-borne viruses among indigenous residents of Egypt Serological survey for arbovirus antibodies in the human and simian populations of the South-East of Gabon Neutralizing antibodies against certain viruses in the sera of residents of India A survey for arboviral antibodies in sera of humans and animals in Lombok, Republic of Indonesia Arthropod-borne virus antibodies in sera from residents of south-east Asia A multipurpose serological survey in Kenya. 2. Results of arbovirus serological tests Arthropod-borne virus antibodies in sera of residents of Kainji Lake Basin, Nigeria 1980 Yellow fever immunity surveys in northern Uganda and Kenya and eastern Somalia, 1966-67 Epidemiological aspects of the 1969 yellow fever epidemic in Nigeria Zika virus infections in Nigeria: virological and seroepidemiological investigations in Oyo State Arthropod-borne viral infections of man in Nigeria, 1964-1970 Vectors of the 1969 yellow fever epidemic on the Jos Plateau, Nigeria Serological survey for a arthropod-borne virus infections in the Philippines Surveillance of the circulation of arbovirus of medical interest in the region of eastern Senegal Serological and entomological study on yellow fever in Sierra Leone Zika virus. II. Pathogenicity and physical properties Neutralizing antibodies against certain recently isolated viruses in the sera of human beings residing in East Africa Arbovirus infections and viral haemorrhagic fevers in Uganda: a serological survey in Karamoja district, 1984 Zika virus: further isolations in the Zika area, and some studies on the strains isolated Serological survey for arboviruses in Uganda, 1967-69
Digitoxin and its analogs as novel cancer therapeutics	scientific article	en:Digitoxin and its analogs as novel cancer therapeutics	2012		23210930	3506989	10.1186/2162-3619-1-4	Digitoxin and a synthetic monosaccharide analog inhibit cell viability in lung cancer cells Na/K-ATPase tethers phospholipase C and IP3 receptor into a calcium-regulatory complex Digitoxin mimics gene therapy with CFTR and suppresses hypersecretion of IL-8 from cystic fibrosis lung epithelial cells Survivin is required for a sustained spindle checkpoint arrest in response to lack of tension Control of apoptosis and mitotic spindle checkpoint by survivin
The Upper Midwest Health Study: a case-control study of pesticide applicators and risk of glioma	scientific article	en:The Upper Midwest Health Study: a case-control study of pesticide applicators and risk of glioma	2012		22691464	3406961	10.1186/1476-069X-11-39	Exposure to Farm Crops, Livestock, and Farm Tasks and Risk of Glioma: The Upper Midwest Health Study Captan Exposure and Evaluation of a Pesticide Exposure Algorithm among Orchard Pesticide Applicators in the Agricultural Health Study Occupational exposure to pesticides and risk of adult brain tumors Gliomas and farm pesticide exposure in women: the Upper Midwest Health Study Mortality in a cohort of licensed pesticide applicators in Florida
Oral susceptibility of Singapore Aedes (Stegomyia) aegypti (Linnaeus) to Zika virus	scientific article	en:Oral susceptibility of Singapore Aedes (Stegomyia) aegypti (Linnaeus) to Zika virus	2012	Zika virus Zika fever	22953014	3429392	10.1371/journal.pntd.0001792	Zika virus. I. Isolations and serological specificity Yellow fever and Zika virus epizootics and enzootics in Uganda
Type I interferon and pattern recognition receptor signaling following particulate matter inhalation	scientific article	en:Type I interferon and pattern recognition receptor signaling following particulate matter inhalation	2012		22776377	3537608	10.1186/1743-8977-9-25	Response of the mouse lung transcriptome to welding fume: effects of stainless and mild steel fumes on lung gene expression in A/J and C57BL/6J mice Vascular function, inflammation, and variations in cardiac autonomic responses to particulate matter among welders Silica crystals and aluminum salts activate the NALP3 inflammasome through phagosomal destabilization The Nalp3 inflammasome is essential for the development of silicosis Innate immune activation through Nalp3 inflammasome sensing of asbestos and silica Effects of Welding Fumes of Differing Composition and Solubility on Free Radical Production and Acute Lung Injury and Inflammation in Rats
A qualitative examination of health and health care utilization after the September 11th terror attacks among World Trade Center Health Registry enrollees	scientific article	en:A qualitative examination of health and health care utilization after the September 11th terror attacks among World Trade Center Health Registry enrollees	2012		22935548	3490950	10.1186/1471-2458-12-721	An overview of 9/11 experiences and respiratory and mental health conditions among World Trade Center Health Registry enrollees
Factoring-in agglomeration of carbon nanotubes and nanofibers for better prediction of their toxicity versus asbestos	scientific article	en:Factoring-in agglomeration of carbon nanotubes and nanofibers for better prediction of their toxicity versus asbestos	2012		22490147	3379937	10.1186/1743-8977-9-10	Global phospholipidomics analysis reveals selective pulmonary peroxidation profiles upon inhalation of single-walled carbon nanotubes Direct effects of carbon nanotubes on dendritic cells induce immune suppression upon pulmonary exposure Comparative proteomics and pulmonary toxicity of instilled single-walled carbon nanotubes, crocidolite asbestos, and ultrafine carbon black in mice Dispersion of single-walled carbon nanotubes by a natural lung surfactant for pulmonary in vitro and in vivo toxicity studies Particle length-dependent titanium dioxide nanomaterials toxicity and bioactivity Phosphatidylserine targets single-walled carbon nanotubes to professional phagocytes in vitro and in vivo Inhalation vs. aspiration of single-walled carbon nanotubes in C57BL/6 mice: inflammation, fibrosis, oxidative stress, and mutagenesis Alteration of deposition pattern and pulmonary response as a result of improved dispersion of aspirated single-walled carbon nanotubes in a mouse model Unusual inflammatory and fibrogenic pulmonary responses to single-walled carbon nanotubes in mice Critical role of glass fiber length in TNF-alpha production and transcription factor activation in macrophages
Working memory related brain network connectivity in individuals with schizophrenia and their siblings		en:Working memory related brain network connectivity in individuals with schizophrenia and their siblings	2012		22654746	3358772	10.3389/fnhum.2012.00137	Brain network connectivity in individuals with schizophrenia and their siblings
Impact of individual-level social capital on quality of life among AIDS patients in China		en:Impact of individual-level social capital on quality of life among AIDS patients in China	2012		23139823	3490922	10.1371/journal.pone.0048888	The role of social capital in successful adherence to antiretroviral therapy in Africa
Evaluating portable infrared spectrometers for measuring the silica content of coal dust	scientific article	en:Evaluating portable infrared spectrometers for measuring the silica content of coal dust	2012-01		22130611	4689602	10.1039/c1em10678c	Performance of high flow rate samplers for respirable particle collection Rapidly progressive coal workers' pneumoconiosis in the United States: geographic clustering and other factors
Ecological guild evolution and the discovery of the world's smallest vertebrate	scholarly article	en:Ecological Guild Evolution and the Discovery of the World's Smallest Vertebrate	2012-01-11	Paedophryne swiftorum Paedophryne amauensis	22253785	3256195	10.1371/journal.pone.0029797	Biology of the sauropod dinosaurs: the evolution of gigantism Paedocypris, a new genus of Southeast Asian cyprinid fish with a remarkable sexual dimorphism, comprises the world's smallest vertebrate
Zika virus infection, Cambodia, 2010	scientific article	en:Zika virus infection, Cambodia, 2010	2012-02	Zika virus Zika fever	22305269	3310457	10.3201/eid1802.111224	Zika virus. I. Isolations and serological specificity
Malaria in the Greater Mekong Subregion: heterogeneity and complexity	scientific article	en:Malaria in the Greater Mekong Subregion: heterogeneity and complexity	2012-03	infectious disease	21382335	3132579	10.1016/j.actatropica.2011.02.016	Shrinking the malaria map: progress and prospects Costs and financial feasibility of malaria elimination Changes in the treatment responses to artesunate-mefloquine on the northwestern border of Thailand during 13 years of continuous deployment Declining artesunate-mefloquine efficacy against falciparum malaria on the Cambodia-Thailand border A collaborative epidemiological investigation into the criminal fake artesunate trade in South East Asia The Anopheles dirus complex: spatial distribution and environmental drivers Naturally acquired Plasmodium knowlesi malaria in human, Thailand Antimalarial drug resistance
Impaired clearance and enhanced pulmonary inflammatory/fibrotic response to carbon nanotubes in myeloperoxidase-deficient mice	scientific article	en:Impaired clearance and enhanced pulmonary inflammatory/fibrotic response to carbon nanotubes in myeloperoxidase-deficient mice	2012-03-30		22479306	3316527	10.1371/journal.pone.0030923	Close Encounters of the Small Kind: Adverse Effects of Man-Made Materials Interfacing with the Nano-Cosmos of Biological Systems Inhalation vs. aspiration of single-walled carbon nanotubes in C57BL/6 mice: inflammation, fibrosis, oxidative stress, and mutagenesis Unusual inflammatory and fibrogenic pulmonary responses to single-walled carbon nanotubes in mice
Development of monoclonal antibodies to recombinant terrelysin and characterization of expression in Aspergillus terreus	scientific article	en:Development of monoclonal antibodies to recombinant terrelysin and characterization of expression in Aspergillus terreus	2012-04		22160315	3348537	10.1099/jmm.0.039511-0	Monoclonal antibodies to hyphal exoantigens derived from the opportunistic pathogen Aspergillus terreus Epidemiology of Aspergillus terreus at a university hospital
Adsorption of surfactant lipids by single-walled carbon nanotubes in mouse lung upon pharyngeal aspiration	scientific article	en:Adsorption of surfactant lipids by single-walled carbon nanotubes in mouse lung upon pharyngeal aspiration	2012-05-22		22463369	3358590	10.1021/nn300626q	Impaired clearance and enhanced pulmonary inflammatory/fibrotic response to carbon nanotubes in myeloperoxidase-deficient mice Phosphatidylserine targets single-walled carbon nanotubes to professional phagocytes in vitro and in vivo Inhalation vs. aspiration of single-walled carbon nanotubes in C57BL/6 mice: inflammation, fibrosis, oxidative stress, and mutagenesis Hydrophobic surfactant-associated polypeptides: SP-C is a lipopeptide with two palmitoylated cysteine residues, whereas SP-B lacks covalently linked fatty acyl groups
Multifunctional role of Bcl-2 in malignant transformation and tumorigenesis of Cr(VI)-transformed lung cells	scientific article	en:Multifunctional role of Bcl-2 in malignant transformation and tumorigenesis of Cr(VI)-transformed lung cells	2012-05-29		22666341	3362580	10.1371/journal.pone.0037045	Carbon nanotubes induce malignant transformation and tumorigenesis of human lung epithelial cells Regulation of lung cancer cell migration and invasion by reactive oxygen species and caveolin-1
Systems immunology of human malaria	scientific article	en:Systems immunology of human malaria	2012-06	infectious disease	22592005	3361535	10.1016/j.pt.2012.03.006	Global malaria mortality between 1980 and 2010: a systematic analysis Single-cell mass cytometry of differential immune and drug responses across a human hematopoietic continuum Advances and challenges in malaria vaccine development Acquired immunity to malaria RNA-Seq: a revolutionary tool for transcriptomics Rapid cloning of high-affinity human monoclonal antibodies against influenza virus Genome sequence of the human malaria parasite Plasmodium falciparum
Mechanisms of carbon nanotube-induced toxicity: focus on oxidative stress	scientific article	en:Mechanisms of carbon nanotube-induced toxicity: focus on oxidative stress	2012-06-01		22513272	4686133	10.1016/j.taap.2012.03.023	Impaired clearance and enhanced pulmonary inflammatory/fibrotic response to carbon nanotubes in myeloperoxidase-deficient mice Single-walled carbon nanotube-induced mitotic disruption The inflammasome: in memory of Dr. Jurg Tschopp Global phospholipidomics analysis reveals selective pulmonary peroxidation profiles upon inhalation of single-walled carbon nanotubes Nanomaterials in humans: identification, characteristics, and potential damage Carbon nanotubes induce malignant transformation and tumorigenesis of human lung epithelial cells Direct effects of carbon nanotubes on dendritic cells induce immune suppression upon pulmonary exposure Airborne nanoparticle concentrations in the manufacturing of polytetrafluoroethylene (PTFE) apparel Comparative proteomics and pulmonary toxicity of instilled single-walled carbon nanotubes, crocidolite asbestos, and ultrafine carbon black in mice Mass-spectrometry based oxidative lipidomics and lipid imaging: applications in traumatic brain injury Lung Function in Rescue Workers at the World Trade Center after 7 Years Reactive oxygen species-independent activation of the IL-1beta inflammasome in cells from patients with chronic granulomatous disease Close Encounters of the Small Kind: Adverse Effects of Man-Made Materials Interfacing with the Nano-Cosmos of Biological Systems Mitochondrial targeting of electron scavenging antioxidants: Regulation of selective oxidation vs random chain reactions Chronic granulomatous disease: the European experience Mass-spectrometric analysis of hydroperoxy- and hydroxy-derivatives of cardiolipin and phosphatidylserine in cells and tissues induced by pro-apoptotic and pro-inflammatory stimuli Airborne monitoring to distinguish engineered nanomaterials from incidental particles for environmental health and safety Mitochondria-targeted disruptors and inhibitors of cytochrome c/cardiolipin peroxidase complexes: a new strategy in anti-apoptotic drug discovery Raw single-wall carbon nanotubes induce oxidative stress and activate MAPKs, AP-1, NF-kappaB, and Akt in normal and malignant human mesothelial cells The Nalp3 inflammasome is essential for the development of silicosis Innate immune activation through Nalp3 inflammasome sensing of asbestos and silica Vitamin E deficiency enhances pulmonary inflammatory response and oxidative stress induced by single-walled carbon nanotubes in C57BL/6 mice Unusual inflammatory and fibrogenic pulmonary responses to single-walled carbon nanotubes in mice Appetizing rancidity of apoptotic cells for macrophages: oxidation, externalization, and recognition of phosphatidylserine
WNT16 influences bone mineral density, cortical bone thickness, bone strength, and osteoporotic fracture risk	scientific article	en:WNT16 influences bone mineral density, cortical bone thickness, bone strength, and osteoporotic fracture risk	2012-07	mineralogy	22792071	3390364	10.1371/journal.pgen.1002745	Genome-wide association study identifies ALDH7A1 as a novel susceptibility gene for osteoporosis Twenty bone-mineral-density loci identified by large-scale meta-analysis of genome-wide association studies A flexible and accurate genotype imputation method for the next generation of genome-wide association studies Genome-wide association with bone mass and geometry in the Framingham Heart Study Large-scale evidence for the effect of the COLIA1 Sp1 polymorphism on osteoporosis outcomes: the GENOMOS study
Analysis of Plasmodium falciparum diversity in natural infections by deep sequencing		en:Analysis of Plasmodium falciparum diversity in natural infections by deep sequencing	2012-07-19	Deep sequencing Plasmodium falciparum genetic variation	22722859	3738909	10.1038/nature11174	African great apes are natural hosts of multiple related malaria species, including Plasmodium falciparum Plasmodium falciparum genome-wide scans for positive selection, recombination hot spots and resistance to antimalarial drugs Accurate whole human genome sequencing using reversible terminator chemistry The Interaction of Selection and Linkage. I. General Considerations; Heterotic Models The 'permeome' of the malaria parasite: an overview of the membrane transport proteins of Plasmodium falciparum Genome sequence of the human malaria parasite Plasmodium falciparum
Artemisinin-resistant malaria: research challenges, opportunities, and public health implications	scientific article	en:Artemisinin-resistant malaria: research challenges, opportunities, and public health implications	2012-08	infectious disease	22855752	3414557	10.4269/ajtmh.2012.12-0025	Emergence of artemisinin-resistant malaria on the western border of Thailand: a longitudinal study Artesunate versus quinine in the treatment of severe falciparum malaria in African children (AQUAMAT): an open-label, randomised trial Plasmodium falciparum genome-wide scans for positive selection, recombination hot spots and resistance to antimalarial drugs Changes in the treatment responses to artesunate-mefloquine on the northwestern border of Thailand during 13 years of continuous deployment
A quantitative comparison of the similarity between genes and geography in worldwide human populations	scientific article	en:A quantitative comparison of the similarity between genes and geography in worldwide human populations	2012-08		22927824	3426559	10.1371/journal.pgen.1002886	Hunter-gatherer genomic diversity suggests a southern African origin for modern humans Swedish population substructure revealed by genome-wide single nucleotide polymorphism data Genome-wide patterns of population structure and admixture in West Africans and African Americans Genetic structure of the Han Chinese population revealed by genome-wide SNP variation The impact of divergence time on the nature of population structure: an example from Iceland Genome-wide insights into the patterns and determinants of fine-scale population structure in humans The genetic structure and history of Africans and African Americans Global distribution of genomic diversity underscores rich complex history of continental human populations Analysis of East Asia genetic substructure using genome-wide SNP arrays Japanese population structure, based on SNP genotypes from 7003 individuals compared to other ethnic groups: effects on population-based association studies Genes mirror geography within Europe The NCBI dbGaP database of genotypes and phenotypes Population structure and eigenanalysis Clines, clusters, and the effect of study design on the inference of human population structure Support from the relationship of genetic and geographic distance in human populations for a serial founder effect originating in Africa
Inflammatory biomarkers predict airflow obstruction after exposure to World Trade Center dust	scientific article	en:Inflammatory biomarkers predict airflow obstruction after exposure to World Trade Center dust	2012-08		21998260	3425337	10.1378/chest.11-1202	Accelerated spirometric decline in New York City firefighters with α₁-antitrypsin deficiency Lung Function in Rescue Workers at the World Trade Center after 7 Years Obstructive airways disease with air trapping among firefighters exposed to World Trade Center dust Trends in respiratory symptoms of firefighters exposed to the world trade center disaster: 2001-2005 The World Trade Center disaster and the health of workers: five-year assessment of a unique medical screening program The World Trade Center residents' respiratory health study: new-onset respiratory symptoms and pulmonary function Cough and Bronchial Responsiveness in Firefighters at the World Trade Center Site
Using epidemiology and neurotoxicology to reduce risks to young workers	scientific article	en:Using epidemiology and neurotoxicology to reduce risks to young workers	2012-08		22394482	3400703	10.1016/j.neuro.2012.02.012	Efficacy of the North American guidelines for children's agricultural tasks in reducing childhood agricultural injuries Nontraditional work factors in farmworker adolescent populations: implications for health research and interventions
Development of risk-based nanomaterial groups for occupational exposure control	scientific article	en:Development of risk-based nanomaterial groups for occupational exposure control	2012-08-07	bioengineering condensed matter physics	26504427	4618785	10.1007/s11051-012-1029-8	Factoring-in agglomeration of carbon nanotubes and nanofibers for better prediction of their toxicity versus asbestos The Diesel Exhaust in Miners study: a cohort mortality study with emphasis on lung cancer Single-walled carbon nanotube-induced mitotic disruption Concept of assessing nanoparticle hazards considering nanoparticle dosemetric and chemical/biological response metrics An epidemiological study of the role of chrysotile asbestos fibre dimensions in determining respiratory disease risk in exposed workers Ethical and scientific issues of nanotechnology in the workplace Principles for characterizing the potential human health effects from exposure to nanomaterials: elements of a screening strategy Margins of Safety Provided by COSHH Essentials and the ILO Chemical Control Toolkit Nanotoxicology: an emerging discipline evolving from studies of ultrafine particles Unusual inflammatory and fibrogenic pulmonary responses to single-walled carbon nanotubes in mice
Brain resuscitation in the drowning victim	scientific article	en:Brain resuscitation in the drowning victim	2012-09-06		22956050	3677166	10.1007/s12028-012-9747-4	Chest-compression-only versus standard cardiopulmonary resuscitation: a meta-analysis Infections caused by Scedosporium spp Mild hypothermia after near drowning in twin toddlers Dramatic neuronal rescue with prolonged selective head cooling after ischemia in fetal lambs
The cellular and molecular basis for malaria parasite invasion of the human red blood cell	scientific article	en:The cellular and molecular basis for malaria parasite invasion of the human red blood cell	2012-09-17	cell biology	22986493	3444787	10.1083/jcb.201206112	Basigin is a receptor essential for erythrocyte invasion by Plasmodium falciparum The international limits and population at risk of Plasmodium vivax transmission in 2009 Plasmodium vivax clinical malaria is commonly observed in Duffy-negative Malagasy people Identification of the moving junction complex of Toxoplasma gondii: a collaboration between distinct secretory organelles The global distribution of clinical episodes of Plasmodium falciparum malaria Genome sequence of the human malaria parasite Plasmodium falciparum Receptor-like specificity of a Plasmodium knowlesi malarial protein that binds to Duffy antigen ligands on erythrocytes A malaria invasion receptor, the 175-kilodalton erythrocyte binding antigen of Plasmodium falciparum recognizes the terminal Neu5Ac(alpha 2-3)Gal- sequences of glycophorin A
The revised classification of eukaryotes	taxonomic paper	en:The revised classification of Eukaryotes	2012-09-28	Diaphoretickes Sar Amorphea	23020233	3483872	10.1111/j.1550-7408.2012.00644.x	How many species are there on Earth and in the ocean? Large-scale phylogenomic analyses reveal that two enigmatic protist lineages, telonemia and centroheliozoa, are related to photosynthetic chromalveolates Phylogenomic analyses support the monophyly of Excavata and resolve relationships among eukaryotic "supergroups" Evolutionary position of breviate amoebae and the primary eukaryote divergence Phylogenomics reveals a new 'megagroup' including most photosynthetic eukaryotes Phylogenomics reshuffles the eukaryotic supergroups
Oxidized phospholipids as biomarkers of tissue and cell damage with a focus on cardiolipin	scientific article	en:Oxidized phospholipids as biomarkers of tissue and cell damage with a focus on cardiolipin	2012-10	biophysics cell biology	22464971	3398793	10.1016/j.bbamem.2012.03.014	Lipidomics identifies cardiolipin oxidation as a mitochondrial target for redox therapy of brain injury Global phospholipidomics analysis reveals selective pulmonary peroxidation profiles upon inhalation of single-walled carbon nanotubes Cytochrome c/cardiolipin relations in mitochondria: a kiss of death
Aging contributes to inflammation in upper extremity tendons and declines in forelimb agility in a rat model of upper extremity overuse	scientific article	en:Aging contributes to inflammation in upper extremity tendons and declines in forelimb agility in a rat model of upper extremity overuse	2012-10-03		23056540	3463562	10.1371/journal.pone.0046954	Exposure to repetitive tasks induces motor changes related to skill acquisition and inflammation in rats Joint inflammation and early degeneration induced by high-force reaching are attenuated by ibuprofen in an animal model of work-related musculoskeletal disorder Exposure-dependent increases in IL-1beta, substance P, CTGF, and tendinosis in flexor digitorum tendons with upper extremity repetitive strain injury Peripheral and central changes combine to induce motor behavioral deficits in a moderate repetition task High force reaching task induces widespread inflammation, increased spinal cord neurochemicals and neuropathic pain Inflammatory biomarkers increase with severity of upper-extremity overuse disorders Median nerve trauma in a rat model of work-related musculoskeletal disorder Chronic repetitive reaching and grasping results in decreased motor performance and widespread tissue responses in a rat model of MSD
Incidence and costs of family member hospitalization following injuries of workers' compensation claimants	scientific article	en:Incidence and costs of family member hospitalization following injuries of workers' compensation claimants	2012-11		22968927	4581427	10.1002/ajim.22110	Economic burden of occupational injury and illness in the United States
Toward Developing A New Occupational Exposure Metric Approach for Characterization of Diesel Aerosols	scientific article	en:Toward Developing A New Occupational Exposure Metric Approach for Characterization of Diesel Aerosols	2012-12		26361400	4562385	10.1080/02786826.2012.715781	Aerosol monitoring during carbon nanofiber production: mobile direct-reading sampling Surface area of particle administered versus mass in determining the pulmonary toxicity of ultrafine and fine carbon black: comparison to ultrafine titanium dioxide Pulmonary response to intratracheal instillation of ultrafine versus fine titanium dioxide: role of particle surface area Meeting report: hazard assessment for nanoparticles--report from an interdisciplinary workshop Nanotoxicology: an emerging discipline evolving from studies of ultrafine particles
Approximate Bayesian computation	scientific article	en:Approximate Bayesian computation	2013	Approximate Bayesian computation	23341757	3547661	10.1371/journal.pcbi.1002803	Lack of confidence in approximate Bayesian computation model choice Simulation-based model selection for dynamical systems in systems and population biology
Mitogenomic evidence for an Indo-West Pacific origin of the Clupeoidei (Teleostei: Clupeiformes)	scientific article	en:Mitogenomic evidence for an Indo-West Pacific origin of the Clupeoidei (Teleostei: Clupeiformes)	2013		23431379	3576394	10.1371/journal.pone.0056485	A new Chanidae (Ostariophysii: Gonorynchiformes) from the Cretaceous of Brazil with affinities to Laurasian gonorynchiforms from Spain Comparable ages for the independent origins of electrogenesis in African and South American weakly electric fishes Bayesian phylogenetics with BEAUti and the BEAST 1.7 Nine exceptional radiations plus high turnover explain species diversity in jawed vertebrates Marine incursion: the freshwater herring of Lake Tanganyika are the product of a marine invasion into west Africa
Mate choice and the origin of menopause	scientific article	en:Mate choice and the origin of menopause	2013		23785268	3681637	10.1371/journal.pcbi.1003092	Menopause in nonhuman primates? Reproductive conflict and the separation of reproductive generations in humans Mortality rate acceleration and post-reproductive lifespan in matrilineal whale species Older age becomes common late in human evolution Grandmothering, menopause, and the evolution of human life histories
Malagasyprinus, a new genus of the Saprininae from Madagascar with description of two new species (Coleoptera, Histeridae, Saprininae) (First contribution to the knowledge of the Histeridae of Madagascar)	scientific article	en:Malagasyprinus, a new genus of the Saprininae from Madagascar with description of two new species (Coleoptera, Histeridae, Saprininae) (First contribution to the knowledge of the Histeridae of Madagascar)	2013		24146560	3800834	10.3897/zookeys.333.5909	Afroprinus cavicola gen. et sp. n. from the Afrotropical region with notes on cave-dwelling Saprininae (Coleoptera, Histeridae)
Are Namibian "fairy circles" the consequence of self-organizing spatial vegetation patterning?	scientific article	en:Are Namibian "fairy circles" the consequence of self-organizing spatial vegetation patterning?	2013		23976962	3744476	10.1371/journal.pone.0070876	The life cycle and life span of Namibian fairy circles The nest architecture of the Florida harvester ant, Pogonomyrmex badius
Brain volume of the newly-discovered species Rhynchocyon udzungwensis (Mammalia: Afrotheria: Macroscelidea): implications for encephalization in sengis	scientific article	en:Brain volume of the newly-discovered species Rhynchocyon udzungwensis (Mammalia: Afrotheria: Macroscelidea): implications for encephalization in sengis	2013		23516530	3596274	10.1371/journal.pone.0058667	Phylogeny and taxonomy of the round-eared sengis or elephant-shrews, genus Macroscelides (Mammalia, Afrotheria, Macroscelidea) A phylogenetic estimate for golden moles (Mammalia, Afrotheria, Chrysochloridae) Molecular evidence for multiple origins of Insectivora and for a new order of endemic African insectivore mammals
Dabrafenib; preclinical characterization, increased efficacy when combined with trametinib, while BRAF/MEK tool combination reduced skin lesions	scientific article	en:Dabrafenib; preclinical characterization, increased efficacy when combined with trametinib, while BRAF/MEK tool combination reduced skin lesions	2013		23844038	3701070	10.1371/journal.pone.0067583	Combined BRAF and MEK inhibition in melanoma with BRAF V600 mutations Improved survival with vemurafenib in melanoma with BRAF V600E mutation Melanomas acquire resistance to B-RAF(V600E) inhibition by RTK or N-RAS upregulation Clinical efficacy of a RAF inhibitor needs broad target blockade in BRAF-mutant melanoma Kinase-dead BRAF and oncogenic RAS cooperate to drive tumor progression through CRAF Discovery of a selective inhibitor of oncogenic B-Raf kinase with potent antimelanoma activity
Five new species and three new subspecies of Erebidae and Noctuidae (Insecta, Lepidoptera) from Northwestern North America, with notes on Chytolita Grote (Erebidae) and Hydraecia Guenée (Noctuidae)	scientific article	en:Five new species and three new subspecies of Erebidae and Noctuidae (Insecta, Lepidoptera) from Northwestern North America, with notes on Chytolita Grote (Erebidae) and Hydraecia Guenée (Noctuidae)	2013		23730179	3668377	10.3897/zookeys.264.4304	Additions and corrections to the check list of the Noctuoidea (Insecta, Lepidoptera) of North America north of Mexico
Zyzyura, a new genus of Eupatorieae (Asteraceae) from Belize	scientific article	en:Zyzyura, a new genus of Eupatorieae (Asteraceae) from Belize	2013		23730194	3668368	10.3897/phytokeys.20.4033	A new species of Fleischmannia (asteraceae, eupatorieae) from el salvador
A new species from Thailand and Burma, Dracaena kaweesakii Wilkin & Suksathan (Asparagaceae subfamily Nolinoideae)	scientific article	en:A new species from Thailand and Burma, Dracaena kaweesakii Wilkin & Suksathan (Asparagaceae subfamily Nolinoideae)	2013		24194672	3817424	10.3897/phytokeys.26.5335	Supporting Red List threat assessments with GeoCAT: geospatial conservation assessment tool
Additions and corrections to the check list of the Noctuoidea (Insecta, Lepidoptera) of North America north of Mexico	scientific article	en:Additions and corrections to the check list of the Noctuoidea (Insecta, Lepidoptera) of North America north of Mexico	2013		23730184	3668382	10.3897/zookeys.264.4443	Lepidoptera family-group names proposed by Thaddeus William Harris in 1841 Comments on differences in classification of the superfamily Noctuoidea (Insecta, Lepidoptera) between Eurasia and North America A revision of the genus Ufeus Grote with the description of a new species from Arizona (Lepidoptera, Noctuidae, Noctuinae, Xylenini, Ufeina) A review of the Paectes arcigera species complex (Guenée) (Lepidoptera, Euteliidae) Five new species and three new subspecies of Erebidae and Noctuidae (Insecta, Lepidoptera) from Northwestern North America, with notes on Chytolita Grote (Erebidae) and Hydraecia Guenée (Noctuidae) A review of the genus Ogdoconta Butler (Lepidoptera, Noctuidae, Condicinae, Condicini) from North America north of Mexico with descriptions of three new species Additions and corrections to the check list of the Noctuoidea (Insecta, Lepidoptera) of North America north of Mexico
The history of 20th century malaria control in Peru	scientific article	en:The history of 20th century malaria control in Peru	2013	infectious disease	24001096	3766208	10.1186/1475-2875-12-303	Clustered local transmission and asymptomatic Plasmodium falciparum and Plasmodium vivax malaria infections in a recently emerged, hypoendemic Peruvian Amazon community
Bad air, amulets and mosquitoes: 2,000 years of changing perspectives on malaria	scientific article	en:Bad air, amulets and mosquitoes: 2,000 years of changing perspectives on malaria	2013	infectious disease	23835014	3723432	10.1186/1475-2875-12-232	History of the discovery of the malaria parasites and their vectors Perceptions of malaria transmission before Ross' discovery in 1897 Alphonse Laveran's discovery 100 years ago and today's global fight against malaria John Macculloch, M.D., F.R.S. (1773-1835) (The precursor of the discipline of malariology)
Identification of minimal human MHC-restricted CD8+ T-cell epitopes within the Plasmodium falciparum circumsporozoite protein (CSP)	scientific article	en:Identification of minimal human MHC-restricted CD8+ T-cell epitopes within the Plasmodium falciparum circumsporozoite protein (CSP)	2013	infectious disease	23738590	3683343	10.1186/1475-2875-12-185	Use of massively parallel pyrosequencing to evaluate the diversity of and selection on Plasmodium falciparum csp T-cell epitopes in Lilongwe, Malawi Structure of the Plasmodium falciparum circumsporozoite protein, a leading malaria vaccine candidate
Prevalence of congenital malaria in high-risk Ghanaian newborns: a cross-sectional study	scientific article	en:Prevalence of congenital malaria in high-risk Ghanaian newborns: a cross-sectional study	2013	infectious disease	23311646	3565937	10.1186/1475-2875-12-17	An analysis of malaria in pregnancy in Africa
Biochemical and immunological mechanisms by which sickle cell trait protects against malaria	scientific article	en:Biochemical and immunological mechanisms by which sickle cell trait protects against malaria	2013	infectious disease	24025776	3847285	10.1186/1475-2875-12-317	Hemoglobinopathies: slicing the Gordian knot of Plasmodium falciparum malaria pathogenesis Global distribution of the sickle cell gene and geographical confirmation of the malaria hypothesis Genome-wide and fine-resolution association analysis of malaria in West Africa Impaired cytoadherence of Plasmodium falciparum-infected erythrocytes containing sickle hemoglobin The effect of alpha+-thalassaemia on the incidence of malaria and other diseases in children living on the coast of Kenya Heritability of malaria in Africa Sickle cell trait and the risk of Plasmodium falciparum malaria and other childhood diseases An immune basis for malaria protection by the sickle cell trait Protection afforded by sickle-cell trait against subtertian malareal infection
Malaria and protective behaviours: is there a malaria trap?	scientific article	en:Malaria and protective behaviours: is there a malaria trap?	2013	infectious disease	23758967	3691867	10.1186/1475-2875-12-200	Insecticide-treated net coverage in Africa: mapping progress in 2000-07 Statics and dynamics of malaria infection in Anopheles mosquitoes
Natural Plasmodium infection in monkeys in the state of Rondônia (Brazilian Western Amazon)	scientific article	en:Natural Plasmodium infection in monkeys in the state of Rondônia (Brazilian Western Amazon)	2013	infectious disease	23731624	3680335	10.1186/1475-2875-12-180	On the diversity of malaria parasites in African apes and the origin of Plasmodium falciparum from Bonobos A new malaria agent in African hominids Comparative genomics of the neglected human malaria parasite Plasmodium vivax Genome sequence of the human malaria parasite Plasmodium falciparum
Prevention of mother-to-child transmission of HIV: cost-effectiveness of antiretroviral regimens and feeding options in Rwanda	scientific article	en:Prevention of mother-to-child transmission of HIV: cost-effectiveness of antiretroviral regimens and feeding options in Rwanda	2013	HIV	23437040	3577801	10.1371/journal.pone.0054180	Cost-effectiveness of models for prevention of vertical HIV transmission - voluntary counseling and testing and choices of drug regimen
Combatting substandard and falsified medicines: a view from Rwanda	scientific article	en:Combatting substandard and falsified medicines: a view from Rwanda	2013		23843747	3699445	10.1371/journal.pmed.1001476	Antimalarial drug quality in the most severely malarious parts of Africa - a six country study
Flow cytometry bioinformatics	scientific article	en:Flow cytometry bioinformatics	2013	flow cytometry bioinformatics	24363631	3867282	10.1371/journal.pcbi.1003365	Contribution of multiparameter flow cytometry immunophenotyping to the diagnostic screening and classification of pediatric cancer High-throughput microfluidic single-cell RT-qPCR Single-cell mass cytometry of differential immune and drug responses across a human hematopoietic continuum Automated pattern-guided principal component analysis vs expert-based immunophenotypic classification of B-cell chronic lymphoproliferative disorders: a step forward in the standardization of clinical immunophenotyping Elucidation of seventeen human peripheral blood B-cell subsets and quantification of the tetanus response using a density-based method for the automated identification of cell populations in multidimensional flow cytometry data Data reduction for spectral clustering to analyze high throughput flow cytometry data MIFlowCyt: the minimum information about a Flow Cytometry Experiment Standardization of cytokine flow cytometry assays Bioconductor: open software development for computational biology and bioinformatics
Viral phylodynamics	scientific article	en:Viral phylodynamics	2013	viral phylodynamics	23555203	3605911	10.1371/journal.pcbi.1002947	Global migration dynamics underlie evolution and persistence of human influenza A (H3N2) Pandemic potential of a strain of influenza A (H1N1): early findings Direct evidence of extensive diversity of HIV-1 in Kinshasa by 1960 The genomic and epidemiological dynamics of human influenza A virus Long intervals of stasis punctuated by bursts of positive selection in the seasonal evolution of influenza A virus The molecular population genetics of HIV-1 group O Long term trends in the evolution of H(3) HA1 human influenza type A Rates of spontaneous mutation among RNA viruses Evolution and ecology of influenza A viruses
Cooperative binding	scientific article	en:Cooperative binding	2013	cooperative binding	23843752	3699289	10.1371/journal.pcbi.1003106	The application of the law of mass action to binding by proteins; interactions with calcium Computing phenomenologic Adair-Klotz constants from microscopic MWC parameters Application of a Theory of Enzyme Specificity to Protein Synthesis
Aspergillus fumigatus--what makes the species a ubiquitous human fungal pathogen?	scientific article	en:Aspergillus fumigatus--what makes the species a ubiquitous human fungal pathogen?	2013		24348239	3857757	10.1371/journal.ppat.1003743	Identification and characterization of an Aspergillus fumigatus "supermater" pair Pathogenesis of Aspergillus fumigatus in Invasive Aspergillosis Aspergillus fumigatus: principles of pathogenesis and host defense
The biology and taxonomy of head and body lice--implications for louse-borne disease prevention	scientific article	en:The biology and taxonomy of head and body lice--implications for louse-borne disease prevention	2013		24244157	3828170	10.1371/journal.ppat.1003724	Genome sequences of the human body louse and its primary endosymbiont provide insights into the permanent parasitic lifestyle
Alternative roles for CRISPR/Cas systems in bacterial pathogenesis	scientific article	en:Alternative roles for CRISPR/Cas systems in bacterial pathogenesis	2013		24146613	3798603	10.1371/journal.ppat.1003621	CRISPR RNA maturation by trans-encoded small RNA and host factor RNase III
Evidence for novel hepaciviruses in rodents	scientific article	en:Evidence for novel hepaciviruses in rodents	2013		23818848	3688547	10.1371/journal.ppat.1003438	Molecular and paleontological evidence for a post-Cretaceous origin of rodents Serology-enabled discovery of genetically diverse hepaciviruses in a new host Bayesian phylogenetics with BEAUti and the BEAST 1.7 Characterization of a canine homolog of hepatitis C virus The GB viruses: a review and proposed classification of GBV-A, GBV-C (HGV), and GBV-D in genus Pegivirus within the family Flaviviridae Identification of GBV-D, a novel GB-like flavivirus from old world frugivorous bats (Pteropus giganteus) in Bangladesh Mfold web server for nucleic acid folding and hybridization prediction MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform An analysis of vertebrate mRNA sequences: intimations of translational control
Yersinia pestis DNA from skeletal remains from the 6(th) century AD reveals insights into Justinianic Plague	scientific article	en:Yersinia pestis DNA from skeletal remains from the 6(th) century AD reveals insights into Justinianic Plague	2013		23658525	3642051	10.1371/journal.ppat.1003349	A draft genome of Yersinia pestis from victims of the Black Death Yersinia pestis genome sequencing identifies patterns of global phylogenetic diversity Distinct clones of Yersinia pestis caused the black death Genotyping and phylogenetic analysis of Yersinia pestis by MLVA: insights into the worldwide expansion of Central Asia plague foci Yersinia pestis Orientalis in remains of ancient plague patients Microevolution and history of the plague bacillus, Yersinia pestis Genotyping, Orientalis-like Yersinia pestis, and plague pandemics Yersinia pestis, the cause of plague, is a recently emerged clone of Yersinia pseudotuberculosis
A mechanistic paradigm for broad-spectrum antivirals that target virus-cell fusion	scientific article	en:A mechanistic paradigm for broad-spectrum antivirals that target virus-cell fusion	2013		23637597	3630091	10.1371/journal.ppat.1003297	Broad-spectrum antiviral therapeutics
A new species of Euscorpius Thorell, 1876 (Scorpiones, Euscorpiidae) from south western Turkey	scientific article	en:A new species of Euscorpius Thorell, 1876 (Scorpiones, Euscorpiidae) from south western Turkey	2013		24294072	3837409	10.3897/zookeys.348.5943	A new species of Euscorpius Thorell, 1876 (Scorpiones, Euscorpiidae) from Marmara Region of Turkey A new species of Euscorpius Thorell, 1876 (Scorpiones, Euscorpiidae) from Turkey
A relict lineage and new species of green palm-pitviper (Squamata, Viperidae, Bothriechis) from the Chortís Highlands of Mesoamerica	scientific article	en:A relict lineage and new species of green palm-pitviper (Squamata, Viperidae, Bothriechis) from the Chortís Highlands of Mesoamerica	2013		23794885	3689108	10.3897/zookeys.298.4834	MUSCLE: multiple sequence alignment with high accuracy and high throughput The herpetofauna of the cloud forests of Honduras Q24798980
The amphibians and reptiles of Luzon Island, Philippines, VIII: the herpetofauna of Cagayan and Isabela Provinces, northern Sierra Madre Mountain Range	scientific article	en:The amphibians and reptiles of Luzon Island, Philippines, VIII: the herpetofauna of Cagayan and Isabela Provinces, northern Sierra Madre Mountain Range	2013		23653519	3591760	10.3897/zookeys.266.3982	Is chytridiomycosis an emerging infectious disease in Asia? A spectacular new Philippine monitor lizard reveals a hidden biogeographic boundary and a novel flagship species for conservation
Tracing the rise of ants - out of the ground	scientific article	en:Tracing the rise of ants - out of the ground	2013		24386323	3873401	10.1371/journal.pone.0084012	Improved phylogenetic analyses corroborate a plausible position of Martialis heureka in the ant tree of life Newly discovered sister lineage sheds light on early ant evolution Evaluating alternative hypotheses for the early evolution and diversification of ants The rise of the ants: a phylogenetic and ecological explanation In search of ant ancestors A formicine in New Jersey cretaceous amber (Hymenoptera: formicidae) and early evolution of the ants
A critical meta-analysis of lens model studies in human judgment and decision-making	scientific article	en:A critical meta-analysis of lens model studies in human judgment and decision-making	2013		24391781	3877076	10.1371/journal.pone.0083528	Report on Certain Enteric Fever Inoculation Statistics
DNA barcoding and species boundary delimitation of selected species of Chinese Acridoidea (Orthoptera: Caelifera)	scientific article	en:DNA barcoding and species boundary delimitation of selected species of Chinese Acridoidea (Orthoptera: Caelifera)	2013		24376533	3869712	10.1371/journal.pone.0082400	Does the DNA barcoding gap exist? - a case study in blue butterflies (Lepidoptera: Lycaenidae) DNA barcodes reveal cryptic host-specificity within the presumed polyphagous members of a genus of parasitoid flies (Diptera: Tachinidae) DNA barcoding: error rates based on comprehensive sampling Problems with mitochondrial DNA as a marker in population, phylogeographic and phylogenetic studies: the effects of inherited symbionts Reconstructing the tempo and mode of evolution in an extinct clade of birds with ancient DNA: the giant moas of New Zealand DNA barcoding: promise and pitfalls Barcoding animal life: cytochrome c oxidase subunit 1 divergences among closely related species Biological identifications through DNA barcodes The CLUSTAL X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
Healthy lifestyles reduce the incidence of chronic diseases and dementia: evidence from the Caerphilly cohort study	scientific article	en:Healthy lifestyles reduce the incidence of chronic diseases and dementia: evidence from the Caerphilly cohort study	2013		24349147	3857242	10.1371/journal.pone.0081877	Toward defining the preclinical stages of Alzheimer's disease: recommendations from the National Institute on Aging-Alzheimer's Association workgroups on diagnostic guidelines for Alzheimer's disease The preventable causes of death in the United States: comparative risk assessment of dietary, lifestyle, and metabolic risk factors Combined impact of health behaviours and mortality in men and women: the EPIC-Norfolk prospective population study Smoking, drinking, and other life style factors and cognitive function in men in the Caerphilly cohort Caerphilly and Speedwell collaborative heart disease studies. The Caerphilly and Speedwell Collaborative Group
A fluorescence-based thermal shift assay identifies inhibitors of mitogen activated protein kinase kinase 4	scientific article	en:A fluorescence-based thermal shift assay identifies inhibitors of mitogen activated protein kinase kinase 4	2013		24339940	3855329	10.1371/journal.pone.0081504	Identification of a dual specificity kinase that activates the Jun kinases and p38-Mpk2
Prenatal glucocorticoid treatment and later mental health in children and adolescents	scientific article	en:Prenatal glucocorticoid treatment and later mental health in children and adolescents	2013		24278432	3838350	10.1371/journal.pone.0081394	ADHD: clinical practice guideline for the diagnosis, evaluation, and treatment of attention-deficit/hyperactivity disorder in children and adolescents
Curcuma longa extract associated with white pepper lessens high fat diet-induced inflammation in subcutaneous adipose tissue	scientific article	en:Curcuma longa extract associated with white pepper lessens high fat diet-induced inflammation in subcutaneous adipose tissue	2013		24260564	3834320	10.1371/journal.pone.0081252	A human gut microbial gene catalogue established by metagenomic sequencing
Cryptic speciation patterns in Iranian rock lizards uncovered by integrative taxonomy	scientific article	en:Cryptic speciation patterns in Iranian rock lizards uncovered by integrative taxonomy	2013		24324611	3851173	10.1371/journal.pone.0080563	Ecological niche modelling and nDNA sequencing support a new, morphologically cryptic beetle species unveiled by DNA barcoding Ernst Mayr and the modern concept of species MUSCLE: multiple sequence alignment with high accuracy and high throughput
Tyrant dinosaur evolution tracks the rise and fall of Late Cretaceous oceans	scientific article	en:Tyrant dinosaur evolution tracks the rise and fall of Late Cretaceous oceans	2013		24223179	3819173	10.1371/journal.pone.0079420	Mountain building triggered late cretaceous North American megaherbivore dinosaur radiation Reanalysis of "Raptorex kriegsteini": a juvenile tyrannosaurid dinosaur from Mongolia A new leptoceratopsid (Ornithischia: Ceratopsia) from the Upper Cretaceous of Shandong, China and its implications for neoceratopsian evolution New horned dinosaurs from Utah provide evidence for intracontinental dinosaur endemism A long-snouted, multihorned tyrannosaurid from the Late Cretaceous of Mongolia A longirostrine tyrannosauroid from the Early Cretaceous of China The impact of the species-area relationship on estimates of paleodiversity
Soothing the threatened brain: leveraging contact comfort with emotionally focused therapy	scientific article	en:Soothing the threatened brain: leveraging contact comfort with emotionally focused therapy	2013		24278126	3835900	10.1371/journal.pone.0079314	Loneliness matters: a theoretical and empirical review of consequences and mechanisms
Are characiform fishes Gondwanan in origin? Insights from a time-scaled molecular phylogeny of the Citharinoidei (Ostariophysi: Characiformes)	scientific article	en:Are characiform fishes Gondwanan in origin? Insights from a time-scaled molecular phylogeny of the Citharinoidei (Ostariophysi: Characiformes)	2013		24116219	3792904	10.1371/journal.pone.0077269	The tree of life and a new classification of bony fishes The first record of a trans-oceanic sister-group relationship between obligate vertebrate troglobites Bayesian phylogenetics with BEAUti and the BEAST 1.7 Cryptic diversity of African tigerfish (genus Hydrocynus) reveals palaeogeographic signatures of linked neogene geotectonic events Phylogenetic relationships within the speciose family Characidae (Teleostei: Ostariophysi: Characiformes) based on multilocus analysis and extensive ingroup sampling Relaxed phylogenetics and dating with confidence Divergence time estimates for the early history of animal phyla and the origin of plants, animals and fungi
Altered cardiac electrophysiology and SUDEP in a model of Dravet syndrome	scientific article	en:Altered cardiac electrophysiology and SUDEP in a model of Dravet syndrome	2013		24155976	3796479	10.1371/journal.pone.0077843	SAP97 and dystrophin macromolecular complexes determine two pools of cardiac sodium channels Nav1.5 in cardiomyocytes Addition of positive charges at the C-terminal peptide region of CssII, a mammalian scorpion peptide toxin, improves its affinity for sodium channels Nav1.6 Voltage-gated Nav channel targeting in the heart requires an ankyrin-G dependent cellular pathway Sodium channel Scn1b null mice exhibit prolonged QT and RR intervals Ankyrin-B coordinates the Na/K ATPase, Na/Ca exchanger, and InsP3 receptor in a cardiac T-tubule/SR microdomain A cardiac arrhythmia syndrome caused by loss of ankyrin-B function Ankyrin-B mutation causes type 4 long-QT cardiac arrhythmia and sudden cardiac death De novo mutations in the sodium-channel gene SCN1A cause severe myoclonic epilepsy of infancy
The pattern of complaints about Australian wind farms does not match the establishment and distribution of turbines: support for the psychogenic, 'communicated disease' hypothesis	scientific article	en:The pattern of complaints about Australian wind farms does not match the establishment and distribution of turbines: support for the psychogenic, 'communicated disease' hypothesis	2013		24146893	3797792	10.1371/journal.pone.0076584	Health effects and wind turbines: a review of the literature
Can environment predict cryptic diversity? The case of Niphargus inhabiting Western Carpathian groundwater	scientific article	en:Can environment predict cryptic diversity? The case of Niphargus inhabiting Western Carpathian groundwater	2013		24204671	3804523	10.1371/journal.pone.0076760	Unsuspected diversity of Niphargus amphipods in the chemoautotrophic cave ecosystem of Frasassi, central Italy Shrimps down under: evolutionary relationships of subterranean crustaceans from Western Australia (Decapoda: Atyidae: Stygiocaris) PATRISTIC: a program for calculating patristic distances and graphically comparing the components of genetic change
MEK inhibitor U0126 reverses protection of axons from Wallerian degeneration independently of MEK-ERK signaling	scientific article	en:MEK inhibitor U0126 reverses protection of axons from Wallerian degeneration independently of MEK-ERK signaling	2013		24124570	3790678	10.1371/journal.pone.0076505	Endogenous Nmnat2 is an essential survival factor for maintenance of healthy axons The selectivity of protein kinase inhibitors: a further update
The role of conspiracist ideation and worldviews in predicting rejection of science	scientific article	en:The role of conspiracist ideation and worldviews in predicting rejection of science	2013		24098391	3788812	10.1371/journal.pone.0075637	Understanding libertarian morality: the psychological dispositions of self-identified libertarians Social psychological origins of conspiracy theories: the case of the jewish conspiracy theory in malaysia Conspiracy theories in science
Mice infected with low-virulence strains of Toxoplasma gondii lose their innate aversion to cat urine, even after extensive parasite clearance	scientific article	en:Mice infected with low-virulence strains of Toxoplasma gondii lose their innate aversion to cat urine, even after extensive parasite clearance	2013		24058668	3776761	10.1371/journal.pone.0075246	Toxoplasma gondii infection and behaviour - location, location, location? Predator cat odors activate sexual arousal pathways in brains of Toxoplasma gondii infected rats Behavioral changes induced by Toxoplasma infection of rodents are highly specific to aversion of cat odors Composite genome map and recombination parameters derived from three archetypal lineages of Toxoplasma gondii Toxoplasma gondii: from animals to humans Fatal attraction in rats infected with Toxoplasma gondii
Ascitic microbiota composition is correlated with clinical severity in cirrhosis with portal hypertension	scientific article	en:Ascitic microbiota composition is correlated with clinical severity in cirrhosis with portal hypertension	2013		24086392	3783492	10.1371/journal.pone.0074884	Guidelines on the management of ascites in cirrhosis Diversity of the human intestinal microbial flora
Chronology of Ksar Akil (Lebanon) and implications for the colonization of Europe by anatomically modern humans	scientific article	en:Chronology of Ksar Akil (Lebanon) and implications for the colonization of Europe by anatomically modern humans	2013		24039825	3770606	10.1371/journal.pone.0072931	An early modern human from the Peştera cu Oase, Romania
Evolutionary history of the grey-faced Sengi, Rhynchocyon udzungwensis, from Tanzania: a molecular and species distribution modelling approach	scientific article	en:Evolutionary history of the grey-faced Sengi, Rhynchocyon udzungwensis, from Tanzania: a molecular and species distribution modelling approach	2013		24015252	3754996	10.1371/journal.pone.0072506	Phylogeny and taxonomy of the round-eared sengis or elephant-shrews, genus Macroscelides (Mammalia, Afrotheria, Macroscelidea) A new estimate of afrotherian phylogeny based on simultaneous analysis of genomic, morphological, and fossil evidence MUSCLE: multiple sequence alignment with high accuracy and high throughput Bayes estimation of species divergence times and ancestral population sizes using DNA sequences from multiple loci The Sahara as a vicariant agent, and the role of Miocene climatic events, in the diversification of the mammalian order Macroscelidea (elephant shrews) Molecular evidence for multiple origins of Insectivora and for a new order of endemic African insectivore mammals
Phytoliths in pottery reveal the use of spice in European prehistoric cuisine	scientific article	en:Phytoliths in pottery reveal the use of spice in European prehistoric cuisine	2013		23990910	3749173	10.1371/journal.pone.0070583	Earliest domestication of common millet (Panicum miliaceum) in East Asia extended to 10,000 years ago
Molecular phylogeny and biogeography of Petaurista inferred from the cytochrome b gene, with implications for the taxonomic status of P. caniceps, P. marica and P. sybilla	scientific article	en:Molecular phylogeny and biogeography of Petaurista inferred from the cytochrome b gene, with implications for the taxonomic status of P. caniceps, P. marica and P. sybilla	2013		23922995	3724786	10.1371/journal.pone.0070461	Bayesian phylogenetics with BEAUti and the BEAST 1.7 Relaxed phylogenetics and dating with confidence CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
Gastrin: a distinct fate of neurogenin3 positive progenitor cells in the embryonic pancreas	scientific article	en:Gastrin: a distinct fate of neurogenin3 positive progenitor cells in the embryonic pancreas	2013		23940571	3734289	10.1371/journal.pone.0070397	Cre reporter strains produced by targeted insertion of EYFP and ECFP into the ROSA26 locus neurogenin3 is required for the development of the four endocrine cell lineages of the pancreas
The hymenopteran tree of life: evidence from protein-coding genes and objectively aligned ribosomal data	scientific article	en:The hymenopteran tree of life: evidence from protein-coding genes and objectively aligned ribosomal data	2013		23936325	3732274	10.1371/journal.pone.0069344	A molecular phylogeny of the Chalcidoidea (Hymenoptera) The antiquity and evolutionary history of social behavior in bees Resolving difficult phylogenetic questions: why more sequences are not enough Recent evolutions of multiple sequence alignment algorithms Bayesian coestimation of phylogeny and sequence alignment
Lujiatun Psittacosaurids: understanding individual and taphonomic variation using 3D geometric morphometrics	scientific article	en:Lujiatun Psittacosaurids: understanding individual and taphonomic variation using 3D geometric morphometrics	2013		23950887	3739782	10.1371/journal.pone.0069265	Cranial growth and variation in edmontosaurs (Dinosauria: Hadrosauridae): implications for latest Cretaceous megaherbivore diversity in North America A basal ceratopsian with transitional features from the Late Jurassic of northwestern China
Vitamin D supplementation and breast cancer prevention: a systematic review and meta-analysis of randomized clinical trials	scientific article	en:Vitamin D supplementation and breast cancer prevention: a systematic review and meta-analysis of randomized clinical trials	2013	breast cancer	23894438	3718745	10.1371/journal.pone.0069269	The VITamin D and OmegA-3 TriaL (VITAL): rationale and design of a large randomized controlled trial of vitamin D and marine omega-3 fatty acid supplements for the primary prevention of cancer and cardiovascular disease Calcium plus vitamin D supplementation and the risk of breast cancer
Homo floresiensis contextualized: a geometric morphometric comparative analysis of fossil and pathological human samples	scientific article	en:Homo floresiensis contextualized: a geometric morphometric comparative analysis of fossil and pathological human samples	2013		23874886	3707875	10.1371/journal.pone.0069119	Post-cranial skeletons of hypothyroid cretins show a similar anatomical mosaic as Homo floresiensis Insular dwarfism in hippos and a model for brain size reduction in Homo floresiensis Are the small human-like fossils found on Flores human endemic cretins? Brain shape in human microcephalics and Homo floresiensis Pygmoid Australomelanesian Homo sapiens skeletal remains from Liang Bua, Flores: population affinities and pathological abnormalities A centrosomal mechanism involving CDK5RAP2 and CENPJ controls brain size
The rationale for consuming cognitive enhancement drugs in university students and teachers	scientific article	en:The rationale for consuming cognitive enhancement drugs in university students and teachers	2013		23874778	3714277	10.1371/journal.pone.0068821	Illicit use of specific prescription stimulants among college students: prevalence, motives, and routes of administration
Reduced prevalence of oral human papillomavirus (HPV) 4 years after bivalent HPV vaccination in a randomized clinical trial in Costa Rica	scientific article	en:Reduced prevalence of oral human papillomavirus (HPV) 4 years after bivalent HPV vaccination in a randomized clinical trial in Costa Rica	2013		23873171	3714284	10.1371/journal.pone.0068329	Human papillomavirus and rising oropharyngeal cancer incidence in the United States Efficacy of quadrivalent HPV vaccine against HPV Infection and disease in males
The ambiguous base-pairing and high substrate efficiency of T-705 (Favipiravir) Ribofuranosyl 5'-triphosphate towards influenza A virus polymerase	scientific article	en:The ambiguous base-pairing and high substrate efficiency of T-705 (Favipiravir) Ribofuranosyl 5'-triphosphate towards influenza A virus polymerase	2013		23874596	3707847	10.1371/journal.pone.0068347	T-705 (favipiravir) inhibition of arenavirus replication in cell culture RNA virus error catastrophe: direct molecular test by using ribavirin
The role of glycoprotein 130 family of cytokines in fetal rat lung development	scientific article	en:The role of glycoprotein 130 family of cytokines in fetal rat lung development	2013		23826327	3691159	10.1371/journal.pone.0067607	Preparing for the first breath: genetic and cellular mechanisms in lung development Q24803709 Principles of interleukin (IL)-6-type cytokine signalling and its regulation
Subglacial Lake Vostok (Antarctica) accretion ice contains a diverse set of sequences from aquatic, marine and sediment-inhabiting bacteria and eukarya	scientific article	en:Subglacial Lake Vostok (Antarctica) accretion ice contains a diverse set of sequences from aquatic, marine and sediment-inhabiting bacteria and eukarya	2013		23843994	3700977	10.1371/journal.pone.0067221	Regeneration of whole fertile plants from 30,000-y-old fruit tissue buried in Siberian permafrost Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences The metagenomics RAST server - a public resource for the automatic phylogenetic and functional analysis of metagenomes Isolation of microbes from Lake Vostok accretion ice An obligately photosynthetic bacterial anaerobe from a deep-sea hydrothermal vent
Ascorbic Acid Biosynthesis and Brackish Water Acclimation in the Euryhaline Freshwater White-Rimmed Stingray, Himantura signifer	scientific article	en:Ascorbic Acid Biosynthesis and Brackish Water Acclimation in the Euryhaline Freshwater White-Rimmed Stingray, Himantura signifer	2013		23825042	3688944	10.1371/journal.pone.0066691	The genetics of vitamin C loss in vertebrates Vitamin C: update on physiology and pharmacology Protein structure prediction servers at University College London ExPASy: The proteomics server for in-depth protein knowledge and analysis
EffiCiency and Safety of an eLectronic cigAreTte (ECLAT) as tobacco cigarettes substitute: a prospective 12-month randomized control design study	scientific article	en:EffiCiency and Safety of an eLectronic cigAreTte (ECLAT) as tobacco cigarettes substitute: a prospective 12-month randomized control design study	2013		23826093	3691171	10.1371/journal.pone.0066317	Effect of an electronic nicotine delivery device (e-Cigarette) on smoking reduction and cessation: a prospective 6-month pilot study Electronic nicotine delivery systems: a research agenda Electronic cigarettes: a survey of users
A giant pliosaurid skull from the late Jurassic of England	scientific article	en:A giant pliosaurid skull from the late Jurassic of England	2013		23741520	3669260	10.1371/journal.pone.0065989	Why the long face? The mechanics of mandibular symphysis proportions in crocodiles High diversity, low disparity and small body size in plesiosaurs (Reptilia, Sauropterygia) from the Triassic-Jurassic boundary An archaic crested plesiosaur in opal from the Lower Cretaceous high-latitude deposits of Australia
The Campanian Ignimbrite eruption: new data on volcanic ash dispersal and its potential impact on human evolution	scientific article	en:The Campanian Ignimbrite eruption: new data on volcanic ash dispersal and its potential impact on human evolution	2013		23799050	3684589	10.1371/journal.pone.0065839	Out of Africa: modern human origins special feature: the spread of modern humans in Europe An early modern human from the Peştera cu Oase, Romania
Variation in lithic technological strategies among the Neanderthals of Gibraltar	scientific article	en:Variation in lithic technological strategies among the Neanderthals of Gibraltar	2013		23762312	3675147	10.1371/journal.pone.0065185	Neanderthal exploitation of marine mammals in Gibraltar
The phage lytic proteins from the Staphylococcus aureus bacteriophage vB SauS-phiIPLA88 display multiple active catalytic domains and do not trigger staphylococcal resistance	scientific article	en:The phage lytic proteins from the Staphylococcus aureus bacteriophage vB_SauS-phiIPLA88 display multiple active catalytic domains and do not trigger staphylococcal resistance	2013		23724076	3665550	10.1371/journal.pone.0064671	Bacteriophage lysins as effective antibacterials Molecular evolution of lytic enzymes of Streptococcus pneumoniae and its bacteriophages
A leafhopper-transmissible DNA virus with novel evolutionary lineage in the family geminiviridae implicated in grapevine redleaf disease by next-generation sequencing	scientific article	en:A leafhopper-transmissible DNA virus with novel evolutionary lineage in the family geminiviridae implicated in grapevine redleaf disease by next-generation sequencing	2013		23755117	3673993	10.1371/journal.pone.0064194	Complete genome sequence of a new circular DNA virus from grapevine MUSCLE: multiple sequence alignment with high accuracy and high throughput
Psychedelics and mental health: a population study	scientific article	en:Psychedelics and mental health: a population study	2013		23976938	3747247	10.1371/journal.pone.0063972	Personality, psychopathology, life attitudes and neuropsychological performance among ritual users of Ayahuasca: a longitudinal study Quantifying the RR of harm to self and others from substance misuse: results from a survey of clinical experts across Scotland Psilocybin occasioned mystical-type experiences: immediate and persisting dose-related effects Mystical-type experiences occasioned by psilocybin mediate the attribution of personal meaning and spiritual significance 14 months later
The complete mitochondrial genome of bean goose (Anser fabalis) and implications for anseriformes taxonomy	scientific article	en:The complete mitochondrial genome of bean goose (Anser fabalis) and implications for anseriformes taxonomy	2013		23717412	3662773	10.1371/journal.pone.0063334	Complete mitochondrial genome sequence of Urechis caupo, a representative of the phylum Echiura
An abelisauroid theropod dinosaur from the Turonian of Madagascar	scientific article	en:An abelisauroid theropod dinosaur from the Turonian of Madagascar	2013		23637961	3630149	10.1371/journal.pone.0062047	A Middle Jurassic abelisaurid from Patagonia and the early diversification of theropod dinosaurs
Scales and dermal skeletal histology of an early bony fish Psarolepis romeri and their bearing on the evolution of rhombic scales and hard tissues	scientific article	en:Scales and dermal skeletal histology of an early bony fish Psarolepis romeri and their bearing on the evolution of rhombic scales and hard tissues	2013		23585902	3621673	10.1371/journal.pone.0061485	Fossil fishes from china provide first evidence of dermal pelvic girdles in osteichthyans
CISA: contig integrator for sequence assembly of bacterial genomes	scientific article	en:CISA: contig integrator for sequence assembly of bacterial genomes	2013		23556006	3610655	10.1371/journal.pone.0060843	De novo assembly of human genomes with massively parallel short read sequencing Velvet: algorithms for de novo short read assembly using de Bruijn graphs Minimus: a fast, lightweight genome assembler Versatile and open software for comparing large genomes
A molecular phylogeny of Plesiorycteropus reassigns the extinct mammalian order 'Bibymalagasia'	scientific article	en:A molecular phylogeny of Plesiorycteropus reassigns the extinct mammalian order 'Bibymalagasia'	2013		23555726	3608660	10.1371/journal.pone.0059614	Dinosaurian soft tissues interpreted as bacterial biofilms Molecular phylogeny and divergence times of Malagasy tenrecs: influence of data partitioning and taxon sampling on dating analyses A new estimate of afrotherian phylogeny based on simultaneous analysis of genomic, morphological, and fossil evidence A web-database of mammalian morphology and a reanalysis of placental phylogeny Molecular evidence for multiple origins of Insectivora and for a new order of endemic African insectivore mammals
An enlarged parietal foramen in the late archaic Xujiayao 11 neurocranium from Northern China, and rare anomalies among Pleistocene Homo	scientific article	en:An enlarged parietal foramen in the late archaic Xujiayao 11 neurocranium from Northern China, and rare anomalies among Pleistocene Homo	2013		23527224	3601107	10.1371/journal.pone.0059587	Enlarged parietal foramina caused by mutations in the homeobox genes ALX4 and MSX2: from genotype to phenotype The ALX4 homeobox gene is mutated in patients with ossification defects of the skull (foramina parietalia permagna, OMIM 168500) Delineation of a contiguous gene syndrome with multiple exostoses, enlarged parietal foramina, craniofacial dysostosis, and mental retardation, caused by deletions in the short arm of chromosome 11
Picomonas judraskeda gen. et sp. nov.: the first identified member of the Picozoa phylum nov., a widespread group of picoeukaryotes, formerly known as 'picobiliphytes'	scientific article	en:Picomonas judraskeda gen. et sp. nov.: the first identified member of the Picozoa phylum nov., a widespread group of picoeukaryotes, formerly known as 'picobiliphytes'	2013		23555709	3608682	10.1371/journal.pone.0059565	The revised classification of eukaryotes Targeted metagenomics and ecology of globally important uncultured eukaryotic phytoplankton Molecular phylogeny and description of the novel katablepharid Roombia truncata gen. et sp. nov., and establishment of the Hacrobia taxon nov Ecological genomics of marine picocyanobacteria Telonemia, a new protist phylum with affinity to chromist lineages A single species, Micromonas pusilla (Prasinophyceae), dominates the eukaryotic picoplankton in the Western English Channel The European ribosomal RNA database Mfold web server for nucleic acid folding and hybridization prediction Prochlorococcus, a marine photosynthetic prokaryote of global significance
The ketamine analogue methoxetamine and 3- and 4-methoxy analogues of phencyclidine are high affinity and selective ligands for the glutamate NMDA receptor	scientific article	en:The ketamine analogue methoxetamine and 3- and 4-methoxy analogues of phencyclidine are high affinity and selective ligands for the glutamate NMDA receptor	2013		23527166	3602154	10.1371/journal.pone.0059334	Predicting new molecular targets for known drugs Evidence for the involvement of dopamine transporters in behavioral stimulant effects of modafinil Salvinorin A: a potent naturally occurring nonnitrogenous kappa opioid selective agonist
A large-scale, higher-level, molecular phylogenetic study of the insect order Lepidoptera (moths and butterflies)	scientific article	en:A large-scale, higher-level, molecular phylogenetic study of the insect order Lepidoptera (moths and butterflies)	2013		23554903	3595289	10.1371/journal.pone.0058568	A molecular phylogeny for yponomeutoidea (insecta, Lepidoptera, ditrysia) and its implications for classification, biogeography and the evolution of host plant use Resolving discrepancy between nucleotides and amino acids in deep-level arthropod phylogenomics: differentiating serine codons in 21-amino-acid models Increased gene sampling strengthens support for higher-level groups within leaf-mining moths and relatives (Lepidoptera: Gracillariidae) Episodic radiations in the fly tree of life Toward reconstructing the evolution of advanced moths and butterflies (Lepidoptera: Ditrysia): an initial molecular study Phylogeny and biogeography of hawkmoths (Lepidoptera: Sphingidae): evidence from five nuclear genes
Minor groove binder distamycin remodels chromatin but inhibits transcription	scientific article	en:Minor groove binder distamycin remodels chromatin but inhibits transcription	2013		23460895	3584068	10.1371/journal.pone.0057693	Nucleosomes, linker DNA, and linker histone form a unique structural motif that directs the higher-order folding and compaction of chromatin Specific interactions of distamycin A and its analogs with (A-T) rich and (G-C) rich duplex regions of DNA and deoxypolynucleotides
A novel selection marker for efficient DNA cloning and recombineering in E. coli	scientific article	en:A novel selection marker for efficient DNA cloning and recombineering in E. coli	2013		23437314	3577784	10.1371/journal.pone.0057075	Simple and highly efficient BAC recombineering using galK selection The knockout mouse project
Resistance to the novel fungicide pyrimorph in Phytophthora capsici: risk assessment and detection of point mutations in CesA3 that confer resistance	scientific article	en:Resistance to the novel fungicide pyrimorph in Phytophthora capsici: risk assessment and detection of point mutations in CesA3 that confer resistance	2013		23431382	3576395	10.1371/journal.pone.0056513	Multiple sequence alignment with the Clustal series of programs
A new machairodont from the Palmetto Fauna (early Pliocene) of Florida, with comments on the origin of the Smilodontini (Mammalia, Carnivora, Felidae)	scientific article	en:A new machairodont from the Palmetto Fauna (early Pliocene) of Florida, with comments on the origin of the Smilodontini (Mammalia, Carnivora, Felidae)	2013		23516394	3596359	10.1371/journal.pone.0056173	Sabretoothed carnivores and the killing of large prey Radiographs reveal exceptional forelimb strength in the sabertooth cat, Smilodon fatalis Functional anatomy of the forelimb in Promegantereon* ogygia (Felidae, Machairodontinae, Smilodontini) from the late miocene of spain and the origins of the sabre-toothed felid model Supermodeled sabercat, predatory behavior in Smilodon fatalis revealed by high-resolution 3D computer simulation
Characterization of Amoeboaphelidium protococcarum, an algal parasite new to the cryptomycota isolated from an outdoor algal pond used for the production of biofuel	scientific article	en:Characterization of Amoeboaphelidium protococcarum, an algal parasite new to the cryptomycota isolated from an outdoor algal pond used for the production of biofuel	2013		23437098	3577820	10.1371/journal.pone.0056232	The revised classification of eukaryotes Algae biodiesel - a feasibility report Evidence that chytrids dominate fungal communities in high-elevation soils Jalview Version 2--a multiple sequence alignment editor and analysis workbench MUSCLE: a multiple sequence alignment method with reduced time and space complexity MUSCLE: multiple sequence alignment with high accuracy and high throughput
A new small-bodied azhdarchoid pterosaur from the lower cretaceous of England and its implications for pterosaur anatomy, diversity and phylogeny	scientific article	en:A new small-bodied azhdarchoid pterosaur from the lower cretaceous of England and its implications for pterosaur anatomy, diversity and phylogeny	2013		23526986	3601094	10.1371/journal.pone.0058451	A new crested pterosaur from the Early Cretaceous of Spain: the first European tapejarid (Pterodactyloidea: Azhdarchoidea) Respiratory evolution facilitated the origin of pterosaur flight and aerial gigantism Discovery of a rare arboreal forest-dwelling flying reptile (Pterosauria, Pterodactyloidea) from China
A molecular phylogeny for yponomeutoidea (insecta, Lepidoptera, ditrysia) and its implications for classification, biogeography and the evolution of host plant use	scientific article	en:A molecular phylogeny for yponomeutoidea (insecta, Lepidoptera, ditrysia) and its implications for classification, biogeography and the evolution of host plant use	2013		23383061	3561450	10.1371/journal.pone.0055066	Increased gene sampling strengthens support for higher-level groups within leaf-mining moths and relatives (Lepidoptera: Gracillariidae) Toward reconstructing the evolution of advanced moths and butterflies (Lepidoptera: Ditrysia): an initial molecular study
A preliminary molecular phylogeny of planthoppers (Hemiptera: Fulgoroidea) based on nuclear and mitochondrial DNA sequences	scientific article	en:A preliminary molecular phylogeny of planthoppers (Hemiptera: Fulgoroidea) based on nuclear and mitochondrial DNA sequences	2013		23516472	3597614	10.1371/journal.pone.0058400	Bayesian phylogenetics with BEAUti and the BEAST 1.7 Relaxed phylogenetics and dating with confidence
Why the long face? The mechanics of mandibular symphysis proportions in crocodiles	scientific article	en:Why the long face? The mechanics of mandibular symphysis proportions in crocodiles	2013		23342027	3547052	10.1371/journal.pone.0053873	Insights into the ecology and evolutionary success of crocodilians revealed through bite-force and tooth-pressure experimentation Supermodeled sabercat, predatory behavior in Smilodon fatalis revealed by high-resolution 3D computer simulation A bizarre new toothed mysticete (Cetacea) from Australia and the early evolution of baleen whales Bite club: comparative bite force in big biting mammals and the prediction of predatory behaviour in fossil taxa
New radiometric ages for the BH-1 hominin from Balanica (Serbia): implications for understanding the role of the Balkans in Middle Pleistocene human evolution	scientific article	en:New radiometric ages for the BH-1 hominin from Balanica (Serbia): implications for understanding the role of the Balkans in Middle Pleistocene human evolution	2013		23405085	3566111	10.1371/journal.pone.0054608	The stem species of our species: a place for the archaic human cranium from Ceprano, Italy A cranium for the earliest Europeans: phylogenetic position of the hominid from Ceprano, Italy
A gigantic sarcopterygian (tetrapodomorph lobe-finned fish) from the upper Devonian of Gondwana (Eden, New South Wales, Australia)	scientific article	en:A gigantic sarcopterygian (tetrapodomorph lobe-finned fish) from the upper Devonian of Gondwana (Eden, New South Wales, Australia)	2013		23483884	3590215	10.1371/journal.pone.0053871	A marine stem-tetrapod from the Devonian of western North America
A new owl species of the genus Otus (aves: strigidae) from Lombok, Indonesia	scientific article	en:A new owl species of the genus Otus (aves: strigidae) from Lombok, Indonesia	2013		23418422	3572129	10.1371/journal.pone.0053712	Tracing the colonization history of the Indian Ocean scops-owls (Strigiformes: Otus) with further insight into the spatio-temporal origin of the Malagasy avifauna
AlgiMatrix™ based 3D cell culture system as an in-vitro tumor model for anticancer studies	scientific article	en:AlgiMatrix™ based 3D cell culture system as an in-vitro tumor model for anticancer studies	2013		23349734	3548811	10.1371/journal.pone.0053708	The Hallmarks of Cancer
A unique box in 28S rRNA is shared by the enigmatic insect order Zoraptera and Dictyoptera	scientific article	en:A unique box in 28S rRNA is shared by the enigmatic insect order Zoraptera and Dictyoptera	2013		23301099	3536744	10.1371/journal.pone.0053679	9-genes reinforce the phylogeny of holometabola and yield alternate views on the phylogenetic placement of Strepsiptera RNAstructure: software for RNA secondary structure prediction and analysis Can comprehensive background knowledge be incorporated into substitution models to improve phylogenetic analyses? A case study on major arthropod relationships Phylogenomics reshuffles the eukaryotic supergroups Sequence logos: a new way to display consensus sequences
Burden of Mycobacterium ulcerans disease (Buruli ulcer) and the underreporting ratio in the territory of Songololo, Democratic Republic of Congo	scientific article	en:Burden of Mycobacterium ulcerans disease (Buruli ulcer) and the underreporting ratio in the territory of Songololo, Democratic Republic of Congo	2013	infectious disease	24340112	3855042	10.1371/journal.pntd.0002563	Neglected tropical diseases in sub-saharan Africa: review of their prevalence, distribution, and disease burden Buruli ulcer in Ghana: results of a national case search
Rapid and scalable plant-based production of a cholera toxin B subunit variant to aid in mass vaccination against cholera outbreaks	scientific article	en:Rapid and scalable plant-based production of a cholera toxin B subunit variant to aid in mass vaccination against cholera outbreaks	2013	infectious disease	23505583	3591335	10.1371/journal.pntd.0002046	The case for reactive mass oral cholera vaccinations HIV-1 neutralization profile and plant-based recombinant expression of actinohivin, an Env glycan-specific lectin devoid of T-cell mitogenic activity
Fine particulate air pollution and the progression of carotid intima-medial thickness: a prospective cohort study from the multi-ethnic study of atherosclerosis and air pollution	scientific article	en:Fine particulate air pollution and the progression of carotid intima-medial thickness: a prospective cohort study from the multi-ethnic study of atherosclerosis and air pollution	2013		23637576	3637008	10.1371/journal.pmed.1001430	Ambient air pollution and atherosclerosis in Los Angeles
Bacteria-human somatic cell lateral gene transfer is enriched in cancer samples	scientific article	en:Bacteria-human somatic cell lateral gene transfer is enriched in cancer samples	2013		23840181	3688693	10.1371/journal.pcbi.1003107	A map of human genome variation from population-scale sequencing New insights into an old story: Agrobacterium-induced tumour formation in plants by plant transformation Recurring mutations found by sequencing an acute myeloid leukemia genome Fast and accurate short read alignment with Burrows-Wheeler transform Mapping and sequencing of structural variation from eight human genomes The diploid genome sequence of an individual human MEGAN analysis of metagenomic data The genome Assembly Archive: a new public resource Agrobacterium-mediated plant transformation: the biology behind the "gene-jockeying" tool Genome fragment of Wolbachia endosymbiont transferred to X chromosome of host insect NotI flanking sequences: a tool for gene discovery and verification of the human genome Initial sequencing and analysis of the human genome Genetic transformation of HeLa cells by Agrobacterium CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice A serine proteinase inhibitor locus at 18q21.3 contains a tandem duplication of the human squamous cell carcinoma antigen gene The integration of HPV-18 into HeLa cells has involved duplication of part of the viral genome as well as human DNA flanking sequences
The extraordinary evolutionary history of the reticuloendotheliosis viruses	scientific article	en:The extraordinary evolutionary history of the reticuloendotheliosis viruses	2013		24013706	3754887	10.1371/journal.pbio.1001642	Updating the evolutionary history of Carnivora (Mammalia): a new species-level supertree complete with divergence time estimates The evolutionary biology of poxviruses Reflections on early malaria vaccine studies, the first successful human malaria vaccination, and beyond The discovery of endogenous retroviruses Discovery of a new endogenous type C retrovirus (FcEV) in cats: evidence for RD-114 being an FcEV(Gag-Pol)/baboon endogenous virus BaEV(Env) recombinant
MYRF is a membrane-associated transcription factor that autoproteolytically cleaves to directly activate myelin genes	scientific article	en:MYRF is a membrane-associated transcription factor that autoproteolytically cleaves to directly activate myelin genes	2013		23966833	3742440	10.1371/journal.pbio.1001625	An orthologue of the Myelin-gene Regulatory Transcription Factor regulates Dictyostelium prestalk differentiation The Pfam protein families database ELM--the database of eukaryotic linear motifs PROSITE, a protein domain database for functional characterization and annotation Myelin gene regulatory factor is a critical transcriptional regulator required for CNS myelination CDD: specific functional annotation with the Conserved Domain Database Model-based analysis of ChIP-Seq (MACS) The HHpred interactive server for protein homology detection and structure prediction Mammalian transcription factor ATF6 is synthesized as a transmembrane protein and activated by proteolysis in response to endoplasmic reticulum stress
Extensive divergence of transcription factor binding in Drosophila embryos with highly conserved gene expression	scientific article	en:Extensive divergence of transcription factor binding in Drosophila embryos with highly conserved gene expression	2013		24068946	3772039	10.1371/journal.pgen.1003748	GENCODE: the reference human genome annotation for The ENCODE Project Analysis of variation at transcription factor binding sites in Drosophila and humans Zelda binding in the early Drosophila melanogaster embryo marks regions subsequently activated at the maternal-to-zygotic transition REDfly v3.0: toward a comprehensive database of transcriptional regulatory elements in Drosophila Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation Five-vertebrate ChIP-seq reveals the evolutionary dynamics of transcription factor binding TopHat: discovering splice junctions with RNA-Seq Ultrafast and memory-efficient alignment of short DNA sequences to the human genome Evolution acts on enhancer organization to fine-tune gradient threshold readouts Model-based analysis of ChIP-Seq (MACS) Species-specific transcription in mice carrying human chromosome 21 Transcription factors bind thousands of active and inactive regions in the Drosophila blastoderm Functional evolution of a cis-regulatory module Comparative genome sequencing of Drosophila pseudoobscura: chromosomal, gene, and cis-element evolution
Plant-symbiotic fungi as chemical engineers: multi-genome analysis of the clavicipitaceae reveals dynamics of alkaloid loci	scientific article	en:Plant-symbiotic fungi as chemical engineers: multi-genome analysis of the clavicipitaceae reveals dynamics of alkaloid loci	2013		23468653	3585121	10.1371/journal.pgen.1003323	Effector diversification within compartments of the Leptosphaeria maculans genome affected by Repeat-Induced Point mutations Genome sequencing and comparative transcriptomics of the model entomopathogenic fungi Metarhizium anisopliae and M. acridum Are loline alkaloid levels regulated in grass endophytes by gene expression or substrate availability? Regulation of a chemical defense against herbivory produced by symbiotic fungi in grass plants OrthoMCL-DB: querying a comprehensive multi-species collection of ortholog groups Gene clusters for insecticidal loline alkaloids in the grass-endophytic fungus Neotyphodium uncinatum MUSCLE: a multiple sequence alignment method with reduced time and space complexity MUSCLE: multiple sequence alignment with high accuracy and high throughput Multiple sequence alignment with the Clustal series of programs The generic genome browser: a building block for a model organism system database A cytosine methyltransferase homologue is essential for repeat-induced point mutation in Neurospora crassa Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
Genomic evidence for island population conversion resolves conflicting theories of polar bear evolution	scientific article	en:Genomic evidence for island population conversion resolves conflicting theories of polar bear evolution	2013		23516372	3597504	10.1371/journal.pgen.1003345	Polar and brown bear genomes reveal ancient admixture and demographic footprints of past climate change Denisova admixture and the first modern human dispersals into Southeast Asia and Oceania Complete mitochondrial genome of a Pleistocene jawbone unveils the origin of polar bear The sequence and de novo assembly of the giant panda genome A complete Neandertal mitochondrial genome sequence determined by high-throughput sequencing Mitochondrial genomes reveal an explosive radiation of extinct and extant bears near the Miocene-Pliocene boundary
The interaction of force and repetition on musculoskeletal and neural tissue responses and sensorimotor behavior in a rat model of work-related musculoskeletal disorders	scientific article	en:The interaction of force and repetition on musculoskeletal and neural tissue responses and sensorimotor behavior in a rat model of work-related musculoskeletal disorders	2013		24156755	3924406	10.1186/1471-2474-14-303	Examining the Interaction of Force and Repetition on Musculoskeletal Disorder Risk: A Systematic Literature Review Aging contributes to inflammation in upper extremity tendons and declines in forelimb agility in a rat model of upper extremity overuse Performance of repetitive tasks induces decreased grip strength and increased fibrogenic proteins in skeletal muscle: role of force and inflammation Exposure to repetitive tasks induces motor changes related to skill acquisition and inflammation in rats Joint inflammation and early degeneration induced by high-force reaching are attenuated by ibuprofen in an animal model of work-related musculoskeletal disorder Exposure-dependent increases in IL-1beta, substance P, CTGF, and tendinosis in flexor digitorum tendons with upper extremity repetitive strain injury Peripheral and central changes combine to induce motor behavioral deficits in a moderate repetition task High force reaching task induces widespread inflammation, increased spinal cord neurochemicals and neuropathic pain Peripheral neuritis and increased spinal cord neurochemicals are induced in a model of repetitive motion injury with low force and repetition exposure Cyclic loading inhibits expression of MMP-3 but not MMP-1 in an in vitro rabbit flexor tendon model Effect of repetition rate on the formation of microtears in tendon in an in vivo cyclical loading model Transforming growth factor-beta following skeletal muscle strain injury in rats Inflammatory biomarkers increase with severity of upper-extremity overuse disorders Inflammation and the pathophysiology of work-related musculoskeletal disorders Work-related musculoskeletal disorders of the hand and wrist: epidemiology, pathophysiology, and sensorimotor changes Stress and the general adaptation syndrome Median nerve trauma in a rat model of work-related musculoskeletal disorder Chronic repetitive reaching and grasping results in decreased motor performance and widespread tissue responses in a rat model of MSD
Aedes (Stegomyia) albopictus (Skuse): a potential vector of Zika virus in Singapore	scientific article	en:Aedes (Stegomyia) albopictus (Skuse): a potential vector of Zika virus in Singapore	2013	Zika virus Zika fever	23936579	3731215	10.1371/journal.pntd.0002348	Zika virus. I. Isolations and serological specificity Yellow fever and Zika virus epizootics and enzootics in Uganda
Quantitative real-time PCR detection of Zika virus and evaluation with field-caught mosquitoes	2013 scientific article	en:Quantitative real-time PCR detection of Zika virus and evaluation with field-caught mosquitoes	2013	Zika virus Zika fever	24148652	4016539	10.1186/1743-422X-10-311	Phylogeny of the genus Flavivirus Epidemic of dengue-4 virus in Yap State, Federated States of Micronesia, and implication of Aedes hensilli as an epidemic vector Flavivirus genome organization, expression, and replication Molecular biology of flaviviruses Full-length sequencing and genomic characterization of Bagaza, Kedougou, and Zika viruses Zika virus infection experimentally induced in a human volunteer Zika virus: a report on three cases of human infection during an epidemic of jaundice in Nigeria Zika Virus Infection in Man Zika Virus Outbreak on Yap Island, Federated States of Micronesia Zika virus. I. Isolations and serological specificity Zika virus outside Africa Investigation surrounding a fatal case of yellow fever in Côte d'Ivoire in 1999 Zika virus infections in Nigeria: virological and seroepidemiological investigations in Oyo State Isolation of Zika virus from Aedes aegypti mosquitoes in Malaysia Yellow fever and Zika virus epizootics and enzootics in Uganda Genetic and serologic properties of Zika virus associated with an epidemic, Yap State, Micronesia, 2007 Probable non-vector-borne transmission of Zika virus, Colorado, USA Continuous cell lines and immune ascitic fluid pools in arbovirus detection OligoDesign: optimal design of LNA (locked nucleic acid) oligonucleotide capture probes for gene expression profiling The CLUSTAL X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools Rapid detection protocol for filoviruses Landscape ecology of sylvatic chikungunya virus and mosquito vectors in southeastern Senegal Improved LNA probe-based assay for the detection of African and South American yellow fever virus strains Genetic characterization of Zika virus strains: geographic expansion of the Asian lineage Zika virus: further isolations in the Zika area, and some studies on the strains isolated A dry-format field-deployable quantitative reverse transcriptase-polymerase chain reaction assay for diagnosis of dengue infections Role of cell culture for virus detection in the age of technology One-step RT-PCR for detection of Zika virus Rapid detection of west nile virus from human clinical specimens, field-collected mosquitoes, and avian samples by a TaqMan reverse transcriptase-PCR assay Surveillance of the circulation of arbovirus of medical interest in the region of eastern Senegal
Carbon nanotube dosimetry: from workplace exposure assessment to inhalation toxicology	scientific article	en:Carbon nanotube dosimetry: from workplace exposure assessment to inhalation toxicology	2013		24144386	4015290	10.1186/1743-8977-10-53	Extrapulmonary transport of MWCNT following inhalation exposure Distribution and fibrotic response following inhalation exposure to multi-walled carbon nanotubes Purification and sidewall functionalization of multiwalled carbon nanotubes and resulting bioactivity in two macrophage models Biodegradation of single-walled carbon nanotubes by eosinophil peroxidase Effect of multi-walled carbon nanotube surface modification on bioactivity in the C57BL/6 mouse model Impairment of coronary arteriolar endothelium-dependent dilation after multi-walled carbon nanotube inhalation: a time-course study Occupational exposure assessment in carbon nanotube and nanofiber primary and secondary manufacturers: mobile direct-reading sampling Dustiness of fine and nanoscale powders Multi-walled carbon nanotubes: sampling criteria and aerosol characterization Acute pulmonary dose-responses to inhaled multi-walled carbon nanotubes Single-walled carbon nanotube-induced mitotic disruption Occupational exposure assessment in carbon nanotube and nanofiber primary and secondary manufacturers Inflammatory biomarkers predict airflow obstruction after exposure to World Trade Center dust Exposure and emissions monitoring during carbon nanofiber production--Part I: elemental carbon and iron-soot aerosols Pulmonary fibrotic response to aspiration of multi-walled carbon nanotubes Aerosol monitoring during carbon nanofiber production: mobile direct-reading sampling Inhalation vs. aspiration of single-walled carbon nanotubes in C57BL/6 mice: inflammation, fibrosis, oxidative stress, and mutagenesis
Oxidative stress, inflammatory biomarkers, and toxicity in mouse lung and liver after inhalation exposure to 100% biodiesel or petroleum diesel emissions	scientific article	en:Oxidative stress, inflammatory biomarkers, and toxicity in mouse lung and liver after inhalation exposure to 100% biodiesel or petroleum diesel emissions	2013		24156694	4671493	10.1080/15287394.2013.825217	Biodiesel versus diesel exposure: enhanced pulmonary inflammation, oxidative stress, and differential morphological changes in the mouse lung Lung cancer in railroad workers exposed to diesel exhaust
Popcorn flavoring effects on reactivity of rat airways in vivo and in vitro	scientific article	en:Popcorn flavoring effects on reactivity of rat airways in vivo and in vitro	2013		23941636	4499850	10.1080/15287394.2013.796302	A computer-controlled whole-body inhalation exposure system for the oil dispersant COREXIT EC9500A Intranasal organic dust exposure-induced airway adaptation response marked by persistent lung inflammation and pathology in mice Inhalation dosimetry of diacetyl and butyric acid, two components of butter flavoring vapors Respiratory Toxicologic Pathology of Inhaled Diacetyl in Sprague-Dawley Rats Clinical Bronchiolitis Obliterans in Workers at a Microwave-Popcorn Plant Effect of ozone treatment on airway reactivity and epithelium-derived relaxing factor in guinea pigs Alteration in the modulatory role of respiratory epithelium after exposure of guinea pigs to respirable cotton dust Influence of epithelium on the reactivity of guinea pig isolated, perfused trachea to bronchoactive drugs
Quantitative real-time PCR detection of Zika virus and evaluation with field-caught Mosquitoes	scientific article	en:Quantitative real-time PCR detection of Zika virus and evaluation with field-caught Mosquitoes	2013	Zika virus			10.1186/1743-422x-10-311	Zika virus. I. Isolations and serological specificity
Evidence and implications of mortality associated with acute Plasmodium vivax malaria	scientific article	en:Evidence and implications of mortality associated with acute Plasmodium vivax malaria	2013-01	infectious disease	23297258	3553673	10.1128/CMR.00074-12	A long neglected world malaria map: Plasmodium vivax endemicity in 2010 Global malaria mortality between 1980 and 2010: a systematic analysis The global distribution of the Duffy blood group The international limits and population at risk of Plasmodium vivax transmission in 2009 Estimating the global clinical burden of Plasmodium falciparum malaria in 2007 Acquired immunity to malaria Estimation of the total parasite biomass in acute falciparum malaria from plasma PfHRP2 Clustered local transmission and asymptomatic Plasmodium falciparum and Plasmodium vivax malaria infections in a recently emerged, hypoendemic Peruvian Amazon community The global distribution of clinical episodes of Plasmodium falciparum malaria
Fungal hemolysins	scientific article	en:Fungal hemolysins	2013-01		22769586	4663657	10.3109/13693786.2012.698025	Development of monoclonal antibodies to recombinant terrelysin and characterization of expression in Aspergillus terreus Monoclonal antibodies to hyphal exoantigens derived from the opportunistic pathogen Aspergillus terreus The Selaginella genome identifies genetic changes associated with the evolution of vascular plants A genome survey of Moniliophthora perniciosa gives new insights into Witches' Broom Disease of cacao Dynamics of Pseudomonas aeruginosa genome evolution Hyphal growth: a tale of motors, lipids, and the Spitzenkörper Assembly of flammutoxin, a cytolytic protein from the edible mushroom Flammulina velutipes, into a pore-forming ring-shaped oligomer on the target cell
Differential mouse pulmonary dose and time course responses to titanium dioxide nanospheres and nanobelts	scientific article	en:Differential mouse pulmonary dose and time course responses to titanium dioxide nanospheres and nanobelts	2013-01		22956629	3537123	10.1093/toxsci/kfs261	Shape-enhanced photocatalytic activity of single-crystalline anatase TiO(2) (101) nanobelts Particle length-dependent titanium dioxide nanomaterials toxicity and bioactivity Nanotoxicology: an emerging discipline evolving from studies of ultrafine particles Lymphatic endothelium: morphological, molecular and functional properties
CTNNA3 (α-catenin) gene variants are associated with diisocyanate asthma: a replication study in a Caucasian worker population	scientific article	en:CTNNA3 (α-catenin) gene variants are associated with diisocyanate asthma: a replication study in a Caucasian worker population	2013-01		22977168	3537126	10.1093/toxsci/kfs272	Genetic variants in antioxidant genes are associated with diisocyanate-induced asthma Hexamethylene diisocyanate asthma is associated with genetic polymorphisms of CD14, IL-13, and IL-4 receptor α
Elevated peripheral eosinophils are associated with new-onset and persistent wheeze and airflow obstruction in world trade center-exposed individuals	scientific article	en:Elevated peripheral eosinophils are associated with new-onset and persistent wheeze and airflow obstruction in world trade center-exposed individuals	2013-02		23227974	4001795	10.3109/02770903.2012.743149	Inflammatory biomarkers predict airflow obstruction after exposure to World Trade Center dust Case report: Lung disease in World Trade Center responders exposed to dust and smoke: carbon nanotubes found in the lungs of World Trade Center patients and dust samples Obstructive airways disease with air trapping among firefighters exposed to World Trade Center dust An overview of 9/11 experiences and respiratory and mental health conditions among World Trade Center Health Registry enrollees Asthma diagnosed after 11 September 2001 among rescue and recovery workers: findings from the World Trade Center Health Registry The World Trade Center disaster and the health of workers: five-year assessment of a unique medical screening program The World Trade Center residents' respiratory health study: new-onset respiratory symptoms and pulmonary function Induced sputum assessment in New York City firefighters exposed to World Trade Center dust Cough and Bronchial Responsiveness in Firefighters at the World Trade Center Site
Nanotechnology: toxicologic pathology	scientific article	en:Nanotechnology: toxicologic pathology	2013-02	cell biology	23389777	4665093	10.1177/0192623312467403	Multi-walled carbon nanotubes: sampling criteria and aerosol characterization Acute pulmonary dose-responses to inhaled multi-walled carbon nanotubes Pulmonary and cardiovascular responses of rats to inhalation of a commercial antimicrobial spray containing titanium dioxide nanoparticles Induction of pulmonary fibrosis by cerium oxide nanoparticles Single-walled carbon nanotube-induced mitotic disruption Pulmonary fibrotic response to aspiration of multi-walled carbon nanotubes Nanotoxicology--A Pathologist's Perspective Distribution and persistence of pleural penetrations by multi-walled carbon nanotubes Multifunctional Nanocarriers for diagnostics, drug delivery and targeted treatment across blood-brain barrier: perspectives on tracking and neuroimaging Nanoparticle inhalation impairs endothelium-dependent vasodilation in subepicardial arterioles Nanoparticle inhalation impairs coronary microvascular reactivity via a local reactive oxygen species-dependent mechanism Surface area of particle administered versus mass in determining the pulmonary toxicity of ultrafine and fine carbon black: comparison to ultrafine titanium dioxide Pulmonary nanoparticle exposure disrupts systemic microvascular nitric oxide signaling Iron oxide nanoparticles induce human microvascular endothelial cell permeability through reactive oxygen species production and microtubule remodeling Inhalation vs. aspiration of single-walled carbon nanotubes in C57BL/6 mice: inflammation, fibrosis, oxidative stress, and mutagenesis Alteration of deposition pattern and pulmonary response as a result of improved dispersion of aspirated single-walled carbon nanotubes in a mouse model Functionally specialized junctions between endothelial cells of lymphatic vessels Vacuolar leukoencephalopathy with widespread astrogliosis in mice lacking transcription factor Nrf2 Principles for characterizing the potential human health effects from exposure to nanomaterials: elements of a screening strategy Nanotoxicology: an emerging discipline evolving from studies of ultrafine particles Unusual inflammatory and fibrogenic pulmonary responses to single-walled carbon nanotubes in mice Manufactured nanomaterials (fullerenes, C60) induce oxidative stress in the brain of juvenile largemouth bass
Associations between dietary intake of choline and betaine and lung cancer risk	scientific article	en:Associations between dietary intake of choline and betaine and lung cancer risk	2013-02-01	lung cancer	23383301	3562321	10.1371/journal.pone.0054561	Human DNA methylomes at base resolution show widespread epigenomic differences High intakes of choline and betaine reduce breast cancer mortality in a population-based study Choline metabolism and risk of breast cancer in a population-based study Dietary choline and betaine and the risk of distal colorectal adenoma in women Increased choline kinase activity and elevated phosphocholine levels in human colon cancer
Hexamethylene diisocyanate (HDI) vapor reactivity with glutathione and subsequent transfer to human albumin	scientific article	en:Hexamethylene diisocyanate (HDI) vapor reactivity with glutathione and subsequent transfer to human albumin	2013-03		23178851	3587365	10.1016/j.tiv.2012.11.013	Vapor conjugation of toluene diisocyanate to specific lysines of human albumin Toluene diisocyanate reactivity with glutathione across a vapor/liquid interface and subsequent transcarbamoylation of human albumin Human innate immune responses to hexamethylene diisocyanate (HDI) and HDI-albumin conjugates Urinary Hexane Diamine to Assess Respiratory Exposure to Hexamethylene Diisocyanate Aerosol: A Human Inhalation Study
Pulmonary toxicity and fibrogenic response of carbon nanotubes	scientific article	en:Pulmonary toxicity and fibrogenic response of carbon nanotubes	2013-03		23194015	4593477	10.3109/15376516.2012.753967	Factoring-in agglomeration of carbon nanotubes and nanofibers for better prediction of their toxicity versus asbestos Impaired clearance and enhanced pulmonary inflammatory/fibrotic response to carbon nanotubes in myeloperoxidase-deficient mice Reactive oxygen species-mediated p38 MAPK regulates carbon nanotube-induced fibrogenic and angiogenic responses Dispersal state of multiwalled carbon nanotubes elicits profibrogenic cellular responses that correlate with fibrogenesis biomarkers and fibrosis in the murine lung Pulmonary fibrotic response to aspiration of multi-walled carbon nanotubes Carbon nanotubes induce malignant transformation and tumorigenesis of human lung epithelial cells Dispersion of single-walled carbon nanotubes by a natural lung surfactant for pulmonary in vitro and in vivo toxicity studies Raw single-wall carbon nanotubes induce oxidative stress and activate MAPKs, AP-1, NF-kappaB, and Akt in normal and malignant human mesothelial cells Inhalation vs. aspiration of single-walled carbon nanotubes in C57BL/6 mice: inflammation, fibrosis, oxidative stress, and mutagenesis Alteration of deposition pattern and pulmonary response as a result of improved dispersion of aspirated single-walled carbon nanotubes in a mouse model Principles for characterizing the potential human health effects from exposure to nanomaterials: elements of a screening strategy Up-regulation and profibrotic role of osteopontin in human idiopathic pulmonary fibrosis Unusual inflammatory and fibrogenic pulmonary responses to single-walled carbon nanotubes in mice
One hundred and one new species of Trigonopterus weevils from New Guinea	scholarly article	en:One hundred and one new species of Trigonopterus weevils from New Guinea	2013-03-27	Trigonopterus	23794832	3677382	10.3897/zookeys.280.3906	Integrative taxonomy on the fast track - towards more sustainability in biodiversity research DNA barcoding for community ecology--how to tackle a hyperdiverse, mostly undescribed Melanesian fauna Biological identifications through DNA barcodes
Continent-wide decoupling of Y-chromosomal genetic variation from language and geography in native South Americans	scientific article	en:Continent-wide decoupling of Y-chromosomal genetic variation from language and geography in native South Americans	2013-04		23593040	3623769	10.1371/journal.pgen.1003460	In the name of the migrant father--analysis of surname origins identifies genetic admixture events undetectable from genealogical records Influences of history, geography, and religion on genetic structure: the Maronites in Lebanon Y-chromosomal variation in sub-Saharan Africa: insights into the history of Niger-Congo groups Geographical structure of the Y-chromosomal genetic landscape of the Levant: a coastal-inland contrast The peopling of Korea revealed by analyses of mitochondrial DNA and Y-chromosomal markers Genes mirror geography within Europe New binary polymorphisms reshape and increase resolution of the human Y chromosomal haplogroup tree Mitochondrial population genomics supports a single pre-Clovis origin with a coastal route for the peopling of the Americas Genetic variation and population structure in native Americans Beringian standstill and spread of Native American founders Male demography in East Asia: a north-south contrast in human population expansion times Y-chromosome evidence for differing ancient demographic histories in the Americas Reduced Y-chromosome, but not mitochondrial DNA, diversity in human populations from West New Guinea The dual origin and Siberian affinities of Native American Y chromosomes Y-chromosomal diversity in Europe is clinal and influenced primarily by geography, rather than by language Recent male-mediated gene flow over a linguistic barrier in Iberia, suggested by analysis of a Y-chromosomal DNA polymorphism Genes, peoples, and languages The genetic relationship between the Finns and the Finnish Saami (Lapps): analysis of nuclear DNA and mtDNA Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data
A phylogeny and revised classification of Squamata, including 4161 species of lizards and snakes	academic work	en:A phylogeny and revised classification of Squamata, including 4161 species of lizards and snakes	2013-04-29	Squamata	23627680	3682911	10.1186/1471-2148-13-93	Repeated origin and loss of adhesive toepads in geckos More than 1000 ultraconserved elements provide evidence that turtles are the sister group of archosaurs Coming to America: multiple origins of New World geckos Rapid and repeated limb loss in a clade of scincid lizards The global burden of snakebite: a literature analysis and modelling based on regional estimates of envenoming and deaths MUSCLE: multiple sequence alignment with high accuracy and high throughput
International guidelines for the in vivo assessment of skin properties in non-clinical settings: part 1. pH	scientific article	en:International guidelines for the in vivo assessment of skin properties in non-clinical settings: part 1. pH	2013-05		23279097	3747458	10.1111/srt.12016	International guidelines for the in vivo assessment of skin properties in non-clinical settings: Part 2. transepidermal water loss and skin hydration
Urinary follicle-stimulating hormone as a measure of natural fertility in a community cohort	scientific article	en:Urinary follicle-stimulating hormone as a measure of natural fertility in a community cohort	2013-05	obstetrics and gynaecology	23171685	3635071	10.1177/1933719112459226	Antimüllerian hormone as a predictor of natural fecundability in women aged 30-42 years
Graphene oxide, but not fullerenes, targets immunoproteasomes and suppresses antigen presentation by dendritic cells	scientific article	en:Graphene oxide, but not fullerenes, targets immunoproteasomes and suppresses antigen presentation by dendritic cells	2013-05-27		22887961	4009732	10.1002/smll.201201546	Direct effects of carbon nanotubes on dendritic cells induce immune suppression upon pulmonary exposure
Carbon nanotubes enhance metastatic growth of lung carcinoma via up-regulation of myeloid-derived suppressor cells	scientific article	en:Carbon nanotubes enhance metastatic growth of lung carcinoma via up-regulation of myeloid-derived suppressor cells	2013-05-27		22996965	3624038	10.1002/smll.201201470	Mechanisms of carbon nanotube-induced toxicity: focus on oxidative stress Carbon nanotubes induce malignant transformation and tumorigenesis of human lung epithelial cells Direct effects of carbon nanotubes on dendritic cells induce immune suppression upon pulmonary exposure Raw single-wall carbon nanotubes induce oxidative stress and activate MAPKs, AP-1, NF-kappaB, and Akt in normal and malignant human mesothelial cells
Disabling musculoskeletal pain in working populations: is it the job, the person, or the culture?	scientific article	en:Disabling musculoskeletal pain in working populations: is it the job, the person, or the culture?	2013-06		23688828	3675684	10.1016/j.pain.2013.02.008	The CUPID (Cultural and Psychosocial Influences on Disability) study: methods of data collection and characteristics of study sample
The trend odds model for ordinal data	scientific article	en:The trend odds model for ordinal data	2013-06-15		23225520	3650098	10.1002/sim.5689	Preventing zoonotic influenza virus infection Are swine workers in the United States at increased risk of infection with zoonotic influenza virus?
Insights into the phylogeny and coding potential of microbial dark matter	scientific article	en:Insights into the phylogeny and coding potential of microbial dark matter	2013-07-14				10.1038/nature12352	Environments shape the nucleotide composition of genomes
The microRNA-200 family targets multiple non-small cell lung cancer prognostic markers in H1299 cells and BEAS-2B cells	scientific article	en:The microRNA-200 family targets multiple non-small cell lung cancer prognostic markers in H1299 cells and BEAS-2B cells	2013-08		23708087	3775564	10.3892/ijo.2013.1963	Formation, regulation and evolution of Caenorhabditis elegans 3'UTRs miRBase: integrating microRNA annotation and deep-sequencing data MicroRNA-200 family members differentially regulate morphological plasticity and mode of melanoma cell invasion Hybrid models identified a 12-gene signature for lung cancer prognosis and chemoresponse prediction Loss of miR-200c: A Marker of Aggressiveness and Chemoresistance in Female Reproductive Cancers miR-200 enhances mouse breast cancer cell colonization to form distant metastases Contextual extracellular cues promote tumor cell EMT and metastasis by regulating miR-200 family expression MicroRNAs: target recognition and regulatory functions Confirmation of gene expression-based prediction of survival in non-small cell lung cancer A reciprocal repression between ZEB1 and members of the miR-200 family promotes EMT and invasion in cancer cells The miR-200 family determines the epithelial phenotype of cancer cells by targeting the E-cadherin repressors ZEB1 and ZEB2 The microRNA.org resource: targets and expression Q24681379 DLC-1:a Rho GTPase-activating protein and tumour suppressor Constructing Molecular Classifiers for the Accurate Prognosis of Lung Adenocarcinoma
Shiftwork and sickness absence among police officers: the BCOPS study	scientific article	en:Shiftwork and sickness absence among police officers: the BCOPS study	2013-08		23808812	4624272	10.3109/07420528.2013.790043	Shift work and chronic disease: the epidemiological evidence
Taxonomic revision of the olingos (Bassaricyon), with description of a new species, the Olinguito	research article	en:Taxonomic revision of the olingos (Bassaricyon), with description of a new species, the Olinguito	2013-08-15	Olinguito Bassaricyon	24003317	3760134	10.3897/zookeys.324.5827	Updating the evolutionary history of Carnivora (Mammalia): a new species-level supertree complete with divergence time estimates Global conservation significance of Ecuador's Yasuní National Park Amazonian amphibian diversity is primarily derived from late Miocene Andean lineages Multigene phylogeny of the Mustelidae: resolving relationships, tempo and biogeographic history of a mammalian adaptive radiation A web-database of mammalian morphology and a reanalysis of placental phylogeny Relaxed phylogenetics and dating with confidence
Mechanisms of nanoparticle-induced oxidative stress and toxicity	scientific article	en:Mechanisms of nanoparticle-induced oxidative stress and toxicity	2013-08-20		24027766	3762079	10.1155/2013/942916	Mechanisms of carbon nanotube-induced toxicity: focus on oxidative stress Factoring-in agglomeration of carbon nanotubes and nanofibers for better prediction of their toxicity versus asbestos Impaired clearance and enhanced pulmonary inflammatory/fibrotic response to carbon nanotubes in myeloperoxidase-deficient mice Reactive oxygen species-mediated p38 MAPK regulates carbon nanotube-induced fibrogenic and angiogenic responses Cell permeability, migration, and reactive oxygen species induced by multiwalled carbon nanotubes in human microvascular endothelial cells Multi-walled carbon nanotube-induced gene expression in the mouse lung: association with lung pathology Iron oxide nanoparticles induce human microvascular endothelial cell permeability through reactive oxygen species production and microtubule remodeling Raw single-wall carbon nanotubes induce oxidative stress and activate MAPKs, AP-1, NF-kappaB, and Akt in normal and malignant human mesothelial cells Inhalation vs. aspiration of single-walled carbon nanotubes in C57BL/6 mice: inflammation, fibrosis, oxidative stress, and mutagenesis The significance of nanoparticles in particle-induced pulmonary fibrosis Principles for characterizing the potential human health effects from exposure to nanomaterials: elements of a screening strategy Exposure assessment for atmospheric ultrafine particles (UFPs) and implications in epidemiologic research Unusual inflammatory and fibrogenic pulmonary responses to single-walled carbon nanotubes in mice Essential role of p53 in silica-induced apoptosis Nanotoxicology Effects of Welding Fumes of Differing Composition and Solubility on Free Radical Production and Acute Lung Injury and Inflammation in Rats Ultrafine particles Induction of Activator Protein-1 through Reactive Oxygen Species by Crystalline Silica in JB6 Cells Enhancement of nitric oxide production by pulmonary cells following silica exposure
A multi-stakeholder perspective on the use of alternative test strategies for nanomaterial safety assessment	scientific article	en:A multi-stakeholder perspective on the use of alternative test strategies for nanomaterial safety assessment	2013-08-27		23924032	4004078	10.1021/nn4037927	Interlaboratory evaluation of rodent pulmonary responses to engineered nanomaterials: the NIEHS Nano GO Consortium Purification and sidewall functionalization of multiwalled carbon nanotubes and resulting bioactivity in two macrophage models Effect of multi-walled carbon nanotube surface modification on bioactivity in the C57BL/6 mouse model Differential mouse pulmonary dose and time course responses to titanium dioxide nanospheres and nanobelts Single-walled carbon nanotube-induced mitotic disruption Dispersal state of multiwalled carbon nanotubes elicits profibrogenic cellular responses that correlate with fibrogenesis biomarkers and fibrosis in the murine lung Decreased dissolution of ZnO by iron doping yields nanoparticles with reduced toxicity in the rodent lung and zebrafish embryos Quantitative techniques for assessing and controlling the dispersion and biological effects of multiwalled carbon nanotubes in mammalian tissue culture cells Concept of assessing nanoparticle hazards considering nanoparticle dosemetric and chemical/biological response metrics Particle length-dependent titanium dioxide nanomaterials toxicity and bioactivity Inhalation vs. aspiration of single-walled carbon nanotubes in C57BL/6 mice: inflammation, fibrosis, oxidative stress, and mutagenesis Alteration of deposition pattern and pulmonary response as a result of improved dispersion of aspirated single-walled carbon nanotubes in a mouse model Principles for characterizing the potential human health effects from exposure to nanomaterials: elements of a screening strategy Unusual inflammatory and fibrogenic pulmonary responses to single-walled carbon nanotubes in mice
Mosquito larval source management for controlling malaria	scientific article	en:Mosquito larval source management for controlling malaria	2013-08-29	malaria	23986463	4669681	10.1002/14651858.CD008923.pub2	Global malaria mortality between 1980 and 2010: a systematic analysis Revisiting the basic reproductive number for malaria and its implications for malaria control Statics and dynamics of malaria infection in Anopheles mosquitoes Advantages of larval control for African malaria vectors: low mobility and behavioural responsiveness of immature mosquito stages allow high effective coverage
Porphyromonas gingivalis facilitates the development and progression of destructive arthritis through its unique bacterial peptidylarginine deiminase (PAD)	scientific article	en:Porphyromonas gingivalis facilitates the development and progression of destructive arthritis through its unique bacterial peptidylarginine deiminase (PAD)	2013-09		24068934	3771902	10.1371/journal.ppat.1003627	Evidence of fibrinogen as a target of citrullination in IgM rheumatoid factor-positive polyarticular juvenile idiopathic arthritis Citrullinated proteins have increased immunogenicity and arthritogenicity and their presence in arthritic joints correlates with disease severity Periodontal disease as a specific, albeit chronic, infection: diagnosis and treatment
Self-reported physical exposure association with medial and lateral epicondylitis incidence in a large longitudinal study	scientific article	en:Self-reported physical exposure association with medial and lateral epicondylitis incidence in a large longitudinal study	2013-09		23825198	4059355	10.1136/oemed-2012-101341	Assessing agreement of self-reported and observed physical exposures of the upper extremity
Patterns of multisite pain and associations with risk factors	scientific article	en:Patterns of multisite pain and associations with risk factors	2013-09		23727463	3747979	10.1016/j.pain.2013.05.039	Disabling musculoskeletal pain in working populations: is it the job, the person, or the culture? The CUPID (Cultural and Psychosocial Influences on Disability) study: methods of data collection and characteristics of study sample
Prevalence and incidence of carpal tunnel syndrome in US working populations: pooled analysis of six prospective studies	scientific article	en:Prevalence and incidence of carpal tunnel syndrome in US working populations: pooled analysis of six prospective studies	2013-09-01		23423472	4042862	10.5271/sjweh.3351	Pooling job physical exposure data from multiple independent studies in a consortium study of carpal tunnel syndrome The WISTAH hand study: a prospective cohort study of distal upper extremity musculoskeletal disorders Performance of simplified scoring systems for hand diagrams in carpal tunnel syndrome screening Evaluation of a symptom diagram for identifying carpal tunnel syndrome Consensus criteria for the classification of carpal tunnel syndrome in epidemiologic studies Risk factors for carpal tunnel syndrome in a general population
Connecting glutathione with immune responses to occupational methylene diphenyl diisocyanate exposure	scientific article	en:Connecting glutathione with immune responses to occupational methylene diphenyl diisocyanate exposure	2013-09-05		23791970	3767171	10.1016/j.cbi.2013.06.005	Pathogenesis and disease mechanisms of occupational asthma Toluene diisocyanate reactivity with glutathione across a vapor/liquid interface and subsequent transcarbamoylation of human albumin Human innate immune responses to hexamethylene diisocyanate (HDI) and HDI-albumin conjugates Induction of Micronuclei following Exposure to Methylene Di-phenyl Diisocyanate: Potential Genotoxic Metabolites
Partitioning the heritability of Tourette syndrome and obsessive compulsive disorder reveals differences in genetic architecture	scientific article	en:Partitioning the heritability of Tourette syndrome and obsessive compulsive disorder reveals differences in genetic architecture	2013-10		24204291	3812053	10.1371/journal.pgen.1003864	Genome-wide association study of Tourette's syndrome MaCH: using sequence and genotype data to estimate haplotypes and unobserved genotypes Finding the missing heritability of complex diseases PLINK: a tool set for whole-genome association and population-based linkage analyses Population structure and eigenanalysis
Fine-mapping the genetic association of the major histocompatibility complex in multiple sclerosis: HLA and non-HLA effects	scientific article	en:Fine-mapping the genetic association of the major histocompatibility complex in multiple sclerosis: HLA and non-HLA effects	2013-11		24278027	3836799	10.1371/journal.pgen.1003926	An integrated encyclopedia of DNA elements in the human genome Genetic risk and a primary role for cell-mediated immune mechanisms in multiple sclerosis Meta-analysis of genome scans and replication identify CD6, IRF8 and TNFRSF1A as new multiple sclerosis susceptibility loci A unified approach to genotype imputation and haplotype-phase inference for large data sets of trios and unrelated individuals PLINK: a tool set for whole-genome association and population-based linkage analyses Mapping multiple sclerosis susceptibility to the HLA-DR locus in African Americans
Acute pulmonary dose-responses to inhaled multi-walled carbon nanotubes	scientific article	en:Acute pulmonary dose-responses to inhaled multi-walled carbon nanotubes	2013-11	biomedical engineering	22881873	4687396	10.3109/17435390.2012.719649	Single-walled carbon nanotube-induced mitotic disruption Pulmonary fibrotic response to aspiration of multi-walled carbon nanotubes Multi-walled carbon nanotube-induced gene expression in the mouse lung: association with lung pathology Distribution and persistence of pleural penetrations by multi-walled carbon nanotubes Inhalation vs. aspiration of single-walled carbon nanotubes in C57BL/6 mice: inflammation, fibrosis, oxidative stress, and mutagenesis Respiratory Toxicologic Pathology of Inhaled Diacetyl in Sprague-Dawley Rats Principles for characterizing the potential human health effects from exposure to nanomaterials: elements of a screening strategy
Development of sandwich ELISAs for the detection of aromatic diisocyanate adducts	scientific article	en:Development of sandwich ELISAs for the detection of aromatic diisocyanate adducts	2013-11-29		24012971	3907087	10.1016/j.jim.2013.08.015	Characterization of methylene diphenyl diisocyanate-haptenated human serum albumin and hemoglobin Development of immunoassays for biomonitoring of hexamethylene diisocyanate exposure
Financial conflicts of interest and reporting bias regarding the association between sugar-sweetened beverages and weight gain: a systematic review of systematic reviews	scientific article	en:Financial conflicts of interest and reporting bias regarding the association between sugar-sweetened beverages and weight gain: a systematic review of systematic reviews	2013-12		24391479	3876974	10.1371/journal.pmed.1001578	Big food, food systems, and global health Beverage consumption and adult weight management: A review Preferred reporting items for systematic reviews and meta-analyses: the PRISMA statement Effects of soft drink consumption on nutrition and health: a systematic review and meta-analysis Relationship between funding source and conclusion among nutrition-related scientific articles Intake of sugar-sweetened beverages and weight gain: a systematic review
The application of the open pharmacological concepts triple store (open PHACTS) to support drug discovery research	scientific article	en:The application of the open pharmacological concepts triple store (open PHACTS) to support drug discovery research	2014		25522365	4270790	10.1371/journal.pone.0115460	Linked open drug data for pharmaceutical research and development DrugBank 3.0: a comprehensive resource for 'omics' research on drugs Predicting new molecular targets for known drugs Chemical Entities of Biological Interest: an update Snail2 cooperates with Snail1 in the repression of vitamin D receptor in colon cancer Molecular actions of vitamin D contributing to cancer prevention ChEBI: a database and ontology for chemical entities of biological interest UniProt: the Universal Protein knowledgebase Gene ontology: tool for the unification of biology. The Gene Ontology Consortium The ENZYME database in 2000 Gapped BLAST and PSI-BLAST: a new generation of protein database search programs Identification of 1,25-dihydroxycholecalciferol, a form of vitamin D3 metabolically active in the intestine
Dietary specialization during the evolution of Western Eurasian hominoids and the extinction of European Great Apes	scientific article	en:Dietary specialization during the evolution of Western Eurasian hominoids and the extinction of European Great Apes	2014		24848272	4029579	10.1371/journal.pone.0097442	Updated chronology for the Miocene hominoid radiation in Western Eurasia A unique Middle Miocene European hominoid and the origins of the great ape and human clade Dental microwear and diet of the Plio-Pleistocene hominin Paranthropus boisei
Ubiquity and diversity of human-associated Demodex mites	scientific article	en:Ubiquity and diversity of human-associated Demodex mites	2014		25162399	4146604	10.1371/journal.pone.0106265	Genetic analysis of lice supports direct contact between modern and archaic humans Risk factors for human disease emergence
Twenty-four new species of Aleiodes Wesmael from the eastern Andes of Ecuador with associated biological information (Hymenoptera, Braconidae, Rogadinae)	scientific article	en:Twenty-four new species of Aleiodes Wesmael from the eastern Andes of Ecuador with associated biological information (Hymenoptera, Braconidae, Rogadinae)	2014		24843275	4023268	10.3897/zookeys.405.7402	We know too little about parasitoid wasp distributions to draw any conclusions about latitudinal trends in species richness, body size and biology Taxonomic contribution to the Aleiodes melanopterus (Erichson) species-group (Hymenoptera, Braconidae, Rogadinae) from Brazil Evolution of the parasitic wasp subfamily Rogadinae (Braconidae): phylogeny and evolution of lepidopteran host ranges and mummy characteristics
Polyphyly of Lichen-cryptic Dagger Moths: synonymy of Agriopodes Hampson and description of a new basal acronictine genus, Chloronycta, gen. n. (Lepidoptera, Noctuidae)	scientific article	en:Polyphyly of Lichen-cryptic Dagger Moths: synonymy of Agriopodes Hampson and description of a new basal acronictine genus, Chloronycta, gen. n. (Lepidoptera, Noctuidae)	2014		25061382	4109473	10.3897/zookeys.421.7424	Additions and corrections to the check list of the Noctuoidea (Insecta, Lepidoptera) of North America north of Mexico Biological identifications through DNA barcodes
Challenges of drug-resistant malaria	scientific article	en:Challenges of drug-resistant malaria	2014	malaria	25402734	4234044	10.1051/parasite/2014059	Fatal cardiotoxicity related to halofantrine: a review based on a worldwide safety data base RNAi and RNAa--the yin and yang of RNAome Characterisation and expression of a PP1 serine/threonine protein phosphatase (PfPP1) from the malaria parasite, Plasmodium falciparum: demonstration of its essential role using RNA interference Antimalarial activities of peptide antibiotics isolated from fungi
Drugs for preventing malaria in pregnant women in endemic areas: any drug regimen versus placebo or no treatment	scientific article	en:Drugs for preventing malaria in pregnant women in endemic areas: any drug regimen versus placebo or no treatment	2014	malaria	25300703	4498495	10.1002/14651858.CD000169.pub3	Intermittent presumptive treatment for malaria CONTROLLED TRIAL OF PYRIMETHAMINE IN PREGNANT WOMEN IN AN AFRICAN VILLAGE
Biogeography and taxonomy of extinct and endangered monk seals illuminated by ancient DNA and skull morphology	scientific article	en:Biogeography and taxonomy of extinct and endangered monk seals illuminated by ancient DNA and skull morphology	2014		24899841	4042687	10.3897/zookeys.409.6244	Bayesian phylogenetics with BEAUti and the BEAST 1.7 Extinction rate, historical population structure and ecological role of the Caribbean monk seal Phylogeny and divergence of the pinnipeds (Carnivora: Mammalia) assessed using a multigene dataset Galápagos and Californian sea lions are separate species: Genetic analysis of the genus Zalophus and its implications for conservation management First human-caused extinction of a cetacean species? Relaxed phylogenetics and dating with confidence Ancient DNA
Persistent Associations between Maternal Prenatal Exposure to Phthalates on Child IQ at Age 7 Years	scientific article	en:Persistent Associations between Maternal Prenatal Exposure to Phthalates on Child IQ at Age 7 Years	2014		25493564	4262205	10.1371/journal.pone.0114003	Seven-year neurodevelopmental scores and prenatal exposure to chlorpyrifos, a common agricultural pesticide Prenatal exposure to organophosphate pesticides and IQ in 7-year-old children Urinary bisphenol A concentrations in relation to serum thyroid and reproductive hormone levels in men from an infertility clinic Temporal variability of urinary phthalate metabolite levels in men of reproductive age Urinary levels of seven phthalate metabolites in the U.S. population from the National Health and Nutrition Examination Survey (NHANES) 1999-2000 Mono(2-ethyl-5-hydroxyhexyl) phthalate and mono-(2-ethyl-5-oxohexyl) phthalate as biomarkers for human exposure assessment to di-(2-ethylhexyl) phthalate Effects of transplacental exposure to environmental pollutants on birth outcomes in a multiethnic population
Protein z exerts pro-angiogenic effects and upregulates CXCR4	scientific article	en:Protein z exerts pro-angiogenic effects and upregulates CXCR4	2014		25474349	4256373	10.1371/journal.pone.0113554	Human Protein Z
A Ceratopsian Dinosaur from the Lower Cretaceous of Western North America, and the Biogeography of Neoceratopsia	scientific article	en:A Ceratopsian Dinosaur from the Lower Cretaceous of Western North America, and the Biogeography of Neoceratopsia	2014		25494182	4262212	10.1371/journal.pone.0112055	Tyrant dinosaur evolution tracks the rise and fall of Late Cretaceous oceans Babes in the wood--a unique window into sea scorpion ontogeny Reanalysis of "Raptorex kriegsteini": a juvenile tyrannosaurid dinosaur from Mongolia New basal iguanodonts from the Cedar Mountain formation of Utah and the evolution of thumb-spiked dinosaurs A new leptoceratopsid (Ornithischia: Ceratopsia) from the Upper Cretaceous of Shandong, China and its implications for neoceratopsian evolution A basal ceratopsian with transitional features from the Late Jurassic of northwestern China
Locomotion in extinct giant kangaroos: were sthenurines hop-less monsters?	scientific article	en:Locomotion in extinct giant kangaroos: were sthenurines hop-less monsters?	2014		25333823	4198187	10.1371/journal.pone.0109888	Hind limb scaling of kangaroos and wallabies (superfamily Macropodoidea): implications for hopping performance, safety factor and elastic savings
Plastic Pollution in the World's Oceans: More than 5 Trillion Plastic Pieces Weighing over 250,000 Tons Afloat at Sea	scientific article	en:Plastic Pollution in the World's Oceans: More than 5 Trillion Plastic Pieces Weighing over 250,000 Tons Afloat at Sea	2014		25494041	4262196	10.1371/journal.pone.0111913	Transport and release of chemicals from plastics to the environment and to wildlife Accumulation and fragmentation of plastic debris in global environments
A new ankylosaurid dinosaur from the Upper Cretaceous (Kirtlandian) of New Mexico with implications for ankylosaurid diversity in the Upper Cretaceous of western North America	scientific article	en:A new ankylosaurid dinosaur from the Upper Cretaceous (Kirtlandian) of New Mexico with implications for ankylosaurid diversity in the Upper Cretaceous of western North America	2014		25250819	4177562	10.1371/journal.pone.0108804	Euoplocephalus tutus and the diversity of ankylosaurid dinosaurs in the Late Cretaceous of Alberta, Canada, and Montana, USA New horned dinosaurs from Utah provide evidence for intracontinental dinosaur endemism
Archaeological evidence for peach (Prunus persica) cultivation and domestication in China	scientific article	en:Archaeological evidence for peach (Prunus persica) cultivation and domestication in China	2014		25192436	4156326	10.1371/journal.pone.0106595	Archaeological soybean (Glycine max) in East Asia: does size matter?
Non-instrumented incubation of a recombinase polymerase amplification assay for the rapid and sensitive detection of proviral HIV-1 DNA	scientific article	en:Non-instrumented incubation of a recombinase polymerase amplification assay for the rapid and sensitive detection of proviral HIV-1 DNA	2014	HIV	25264766	4180440	10.1371/journal.pone.0108189	Rapid detection of HIV-1 proviral DNA for early infant diagnosis using recombinase polymerase amplification Application of isothermal helicase-dependent amplification with a disposable detection device in a simple sensitive stool test for toxigenic Clostridium difficile DNA detection using recombination proteins Helicase-dependent isothermal DNA amplification Loop-mediated isothermal amplification of DNA
Molecular phylogeny and biogeographic history of the armored neotropical catfish subfamilies hypoptopomatinae, neoplecostominae and otothyrinae (siluriformes: loricariidae)	scientific article	en:Molecular phylogeny and biogeographic history of the armored neotropical catfish subfamilies hypoptopomatinae, neoplecostominae and otothyrinae (siluriformes: loricariidae)	2014		25148406	4141799	10.1371/journal.pone.0105564	Phylogenetic relationships within the speciose family Characidae (Teleostei: Ostariophysi: Characiformes) based on multilocus analysis and extensive ingroup sampling MUSCLE: a multiple sequence alignment method with reduced time and space complexity TREEFINDER: a powerful graphical analysis environment for molecular phylogenetics
Psychedelic N,N-dimethyltryptamine and 5-methoxy-N,N-dimethyltryptamine modulate innate and adaptive inflammatory responses through the sigma-1 receptor of human monocyte-derived dendritic cells	scientific article	en:Psychedelic N,N-dimethyltryptamine and 5-methoxy-N,N-dimethyltryptamine modulate innate and adaptive inflammatory responses through the sigma-1 receptor of human monocyte-derived dendritic cells	2014		25171370	4149582	10.1371/journal.pone.0106533	Psychedelic 5-methoxy-N,N-dimethyltryptamine: metabolism, pharmacokinetics, drug interactions, and pharmacological actions Genome-wide association study identifies variants at CLU and PICALM associated with Alzheimer's disease Highly pathogenic H5N1 influenza virus can enter the central nervous system and induce neuroinflammation and neurodegeneration When the endogenous hallucinogenic trace amine N,N-dimethyltryptamine meets the sigma-1 receptor The hallucinogen N,N-dimethyltryptamine (DMT) is an endogenous sigma-1 receptor regulator
Characterization of platelet-derived growth factor-A expression in mouse tissues using a lacZ knock-in approach	scientific article	en:Characterization of platelet-derived growth factor-A expression in mouse tissues using a lacZ knock-in approach	2014		25166724	4148317	10.1371/journal.pone.0105477	Overexpression of platelet-derived growth factor receptor alpha in breast cancer is associated with tumour progression PDGF-C is a new protease-activated ligand for the PDGF alpha-receptor Mechanism of action and in vivo role of platelet-derived growth factor Structural characterization of the human platelet-derived growth factor A-chain cDNA and gene: alternative exon usage predicts two different precursor proteins
Dendrogramma, new genus, with two new non-bilaterian species from the marine bathyal of southeastern Australia (Animalia, Metazoa incertae sedis)--with similarities to some medusoids from the Precambrian Ediacara	scientific article	en:Dendrogramma, new genus, with two new non-bilaterian species from the marine bathyal of southeastern Australia (Animalia, Metazoa incertae sedis)--with similarities to some medusoids from the Precambrian Ediacara	2014		25184248	4153628	10.1371/journal.pone.0102976	The ctenophore genome and the evolutionary origins of neural systems The genome of the ctenophore Mnemiopsis leidyi and its implications for cell type evolution Assessing the root of bilaterian animals with scalable phylogenomic methods
Aspergers--different, not less: occupational strengths and job interests of individuals with Asperger's Syndrome	scientific article	en:Aspergers--different, not less: occupational strengths and job interests of individuals with Asperger's Syndrome	2014		24950060	4065100	10.1371/journal.pone.0100358	How does visual thinking work in the mind of a person with autism? A personal account What aspects of autism predispose to talent?
Dental calculus reveals unique insights into food items, cooking and plant processing in prehistoric central Sudan	scientific article	en:Dental calculus reveals unique insights into food items, cooking and plant processing in prehistoric central Sudan	2014		25028938	4100759	10.1371/journal.pone.0100808	Out of Africa: modern human origins special feature: isotopic evidence for the diets of European Neanderthals and early modern humans The broad spectrum revisited: evidence from plant remains
Discovery of a rare pterosaur bone bed in a cretaceous desert with insights on ontogeny and behavior of flying reptiles	scientific article	en:Discovery of a rare pterosaur bone bed in a cretaceous desert with insights on ontogeny and behavior of flying reptiles	2014		25118592	4131874	10.1371/journal.pone.0100005	A new crested pterosaur from the Early Cretaceous of Spain: the first European tapejarid (Pterodactyloidea: Azhdarchoidea) A reappraisal of azhdarchid pterosaur functional morphology and paleoecology Developmental growth patterns of the filter-feeder pterosaur, Pterodaustro guiñazui
Torvosaurus gurneyi n. sp., the largest terrestrial predator from Europe, and a proposed terminology of the maxilla anatomy in nonavian theropods	scientific article	en:Torvosaurus gurneyi n. sp., the largest terrestrial predator from Europe, and a proposed terminology of the maxilla anatomy in nonavian theropods	2014		24598585	3943790	10.1371/journal.pone.0088905	Exceptionally preserved juvenile megalosauroid theropod dinosaur with filamentous integument from the Late Jurassic of Germany A late-surviving basal theropod dinosaur from the latest Triassic of North America New information on the cranial anatomy of Acrocanthosaurus atokensis and its implications for the phylogeny of Allosauroidea (Dinosauria: Theropoda)
Terrestrial origin of viviparity in mesozoic marine reptiles indicated by early triassic embryonic fossils	scientific article	en:Terrestrial origin of viviparity in mesozoic marine reptiles indicated by early triassic embryonic fossils	2014		24533127	3922983	10.1371/journal.pone.0088640	New protocetid whale from the middle eocene of pakistan: birth on land, precocial development, and sexual dimorphism
New material of Beelzebufo, a hyperossified frog (Amphibia: Anura) from the late cretaceous of Madagascar	scientific article	en:New material of Beelzebufo, a hyperossified frog (Amphibia: Anura) from the late cretaceous of Madagascar	2014		24489877	3905036	10.1371/journal.pone.0087236	A re-interpretation of the Eocene anuran Thaumastosaurus based on microCT examination of a 'mummified' specimen A giant frog with South American affinities from the Late Cretaceous of Madagascar Relaxed phylogenetics and dating with confidence New dinosaurs link southern landmasses in the Mid-Cretaceous
A leech capable of surviving exposure to extremely low temperatures	scientific article	en:A leech capable of surviving exposure to extremely low temperatures	2014		24466250	3899358	10.1371/journal.pone.0086807	Vitrification is essential for anhydrobiosis in an African chironomid, Polypedilum vanderplanki
Ancient DNA analysis reveals high frequency of European lactase persistence allele (T-13910) in medieval central europe	scientific article	en:Ancient DNA analysis reveals high frequency of European lactase persistence allele (T-13910) in medieval central europe	2014		24465990	3900515	10.1371/journal.pone.0086251	Ancient DNA suggests the leading role played by men in the Neolithic dissemination Ancient DNA reveals male diffusion through the Neolithic Mediterranean route A worldwide correlation of lactase persistence phenotype and genotypes The origins of lactase persistence in Europe Independent introduction of two lactase-persistence alleles into human populations reflects different history of adaptation to milk culture Convergent adaptation of human lactase persistence in Africa and Europe A map of recent positive selection in the human genome Ancient DNA Genetic signatures of strong recent positive selection at the lactase gene Dating the origin of the CCR5-Delta32 AIDS-resistance allele by the coalescence of haplotypes
Crystal structure of the lamprey variable lymphocyte receptor C reveals an unusual feature in its N-terminal capping module	scientific article	en:Crystal structure of the lamprey variable lymphocyte receptor C reveals an unusual feature in its N-terminal capping module	2014		24465760	3900441	10.1371/journal.pone.0085875	PHENIX: a comprehensive Python-based system for macromolecular structure solution MolProbity: all-atom structure validation for macromolecular crystallography Origin and evolution of the adaptive immune system: genetic events and selective pressures Structures of glycoprotein Ibalpha and its complex with von Willebrand factor A1 domain CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
The case of Moulay Ismael--fact or fancy?	scientific article	en:The case of Moulay Ismael--fact or fancy?	2014		24551034	3925083	10.1371/journal.pone.0085292	Female facial attractiveness increases during the fertile phase of the menstrual cycle The genetic legacy of the Mongols Maternal age and fetal loss: population based register linkage study
Correcting the cystic fibrosis disease mutant, A455E CFTR	scientific article	en:Correcting the cystic fibrosis disease mutant, A455E CFTR	2014		24416359	3885674	10.1371/journal.pone.0085183	Mechanisms of CFTR Folding at the Endoplasmic Reticulum Rescue of CF airway epithelial cell function in vitro by a CFTR potentiator, VX-770 A Golgi-associated PDZ domain protein modulates cystic fibrosis transmembrane regulator plasma membrane expression
Water-induced finger wrinkles do not affect touch acuity or dexterity in handling wet objects	scientific article	en:Water-induced finger wrinkles do not affect touch acuity or dexterity in handling wet objects	2014		24416318	3885627	10.1371/journal.pone.0084949	Water-induced finger wrinkles improve handling of wet objects Finger wrinkling after immersion in water
Baboon feeding ecology informs the dietary niche of Paranthropus boisei	scientific article	en:Baboon feeding ecology informs the dietary niche of Paranthropus boisei	2014		24416315	3885648	10.1371/journal.pone.0084942	Diet of Paranthropus boisei in the early Pleistocene of East Africa Dental microwear and diet of the Plio-Pleistocene hominin Paranthropus boisei Diet and the evolution of human amylase gene copy number variation
Green tea and one of its constituents, Epigallocatechine-3-gallate, are potent inhibitors of human 11β-hydroxysteroid dehydrogenase type 1	scientific article	en:Green tea and one of its constituents, Epigallocatechine-3-gallate, are potent inhibitors of human 11β-hydroxysteroid dehydrogenase type 1	2014		24404164	3880318	10.1371/journal.pone.0084468	Beneficial effects of green tea: a literature review
The 2.1 Ga old Francevillian biota: biogenicity, taphonomy and biodiversity	scientific article	en:The 2.1 Ga old Francevillian biota: biogenicity, taphonomy and biodiversity	2014		24963687	4070892	10.1371/journal.pone.0099438	Eukaryotic organisms in Proterozoic oceans
Shrinking wings for ultrasonic pitch production: hyperintense ultra-short-wavelength calls in a new genus of neotropical katydids (Orthoptera: Tettigoniidae)	scientific article	en:Shrinking wings for ultrasonic pitch production: hyperintense ultra-short-wavelength calls in a new genus of neotropical katydids (Orthoptera: Tettigoniidae)	2014		24901234	4047022	10.1371/journal.pone.0098708	So small, so loud: extremely high sound pressure level from a pygmy aquatic insect (Corixidae, Micronectinae)
Characterizing the Late Pleistocene MSA Lithic Technology of Sibudu, KwaZulu-Natal, South Africa	scientific article	en:Characterizing the Late Pleistocene MSA Lithic Technology of Sibudu, KwaZulu-Natal, South Africa	2014		24878544	4039507	10.1371/journal.pone.0098359	From the Cover: A Howiesons Poort tradition of engraving ostrich eggshell containers dated to 60,000 years ago at Diepkloof Rock Shelter, South Africa From the Cover: Implications for complex cognition from the hafting of tools with compound adhesives in the Middle Stone Age, South Africa Why did modern human populations disperse from Africa ca. 60,000 years ago? A new model
Origin and evolution of glutamyl-prolyl tRNA synthetase WHEP domains reveal evolutionary relationships within Holozoa	scientific article	en:Origin and evolution of glutamyl-prolyl tRNA synthetase WHEP domains reveal evolutionary relationships within Holozoa	2014		24968216	4072531	10.1371/journal.pone.0098493	Evolution of function of a fused metazoan tRNA synthetase Genome analysis of the platypus reveals unique signatures of evolution Multigene phylogeny of choanozoa and the origin of animals The genome of the choanoflagellate Monosiga brevicollis and the origin of metazoans Evaluating alternative hypotheses for the early evolution and diversification of ants Noncanonical function of glutamyl-prolyl-tRNA synthetase: gene-specific silencing of translation The evolutionary position of nematodes Phylogenetic relationships among cetartiodactyls based on insertions of short and long interpersed elements: hippopotamuses are the closest extant relatives of whales Interaction between human tRNA synthetases involves repeated sequence elements
Identification of metabolites, clinical chemistry markers and transcripts associated with hepatotoxicity	scientific article	en:Identification of metabolites, clinical chemistry markers and transcripts associated with hepatotoxicity	2014		24836604	4023975	10.1371/journal.pone.0097249	Exploring the full spectrum of macrophage activation
The soul-sucking wasp by popular acclaim--museum visitor participation in biodiversity discovery and taxonomy	scientific article	en:The soul-sucking wasp by popular acclaim--museum visitor participation in biodiversity discovery and taxonomy	2014		24755672	3995701	10.1371/journal.pone.0095068	Micro-computed tomography: Introducing new dimensions to taxonomy How many species are there on Earth and in the ocean?
Hidden among sea anemones: the first comprehensive phylogenetic reconstruction of the order Actiniaria (Cnidaria, Anthozoa, Hexacorallia) reveals a novel group of hexacorals	scientific article	en:Hidden among sea anemones: the first comprehensive phylogenetic reconstruction of the order Actiniaria (Cnidaria, Anthozoa, Hexacorallia) reveals a novel group of hexacorals	2014		24806477	4013120	10.1371/journal.pone.0096998	Stylobates birtlesi sp. n., a new species of carcinoecium-forming sea anemone (Cnidaria, Actiniaria, Actiniidae) from eastern Australia Phylogenetic relationships among deep-sea and chemosynthetic sea anemones: actinoscyphiidae and actinostolidae (Actiniaria: Mesomyaria)
Genome-wide comparative analysis of 20 miniature inverted-repeat transposable element families in Brassica rapa and B. oleracea	scientific article	en:Genome-wide comparative analysis of 20 miniature inverted-repeat transposable element families in Brassica rapa and B. oleracea	2014		24747717	3991616	10.1371/journal.pone.0094499	Miniature inverted-repeat transposable elements (MITEs) have been accumulated through amplification bursts and play important roles in gene expression and species diversity in Oryza sativa Sequence and structure of Brassica rapa chromosome A3 miRBase: tools for microRNA genomics A family of human microRNA genes from miniature inverted-repeat transposable elements Mfold web server for nucleic acid folding and hybridization prediction
The oldest caseid synapsid from the Late Pennsylvanian of Kansas, and the evolution of herbivory in terrestrial vertebrates	scientific article	en:The oldest caseid synapsid from the Late Pennsylvanian of Kansas, and the evolution of herbivory in terrestrial vertebrates	2014		24739998	3989228	10.1371/journal.pone.0094518	A universal scaling relationship between body mass and proximal limb bone dimensions in quadrupedal terrestrial tetrapods
The bicolored white-toothed shrew Crocidura leucodon (HERMANN 1780) is an indigenous host of mammalian Borna disease virus	scientific article	en:The bicolored white-toothed shrew Crocidura leucodon (HERMANN 1780) is an indigenous host of mammalian Borna disease virus	2014		24699636	3974811	10.1371/journal.pone.0093659	Endogenous viral elements in animal genomes Unexpected inheritance: multiple integrations of ancient bornavirus and ebolavirus/marburgvirus sequences in vertebrate genomes Endogenous non-retroviral RNA virus elements in mammalian genomes
Activation of 2' 5'-oligoadenylate synthetase by stem loops at the 5'-end of the West Nile virus genome	scientific article	en:Activation of 2' 5'-oligoadenylate synthetase by stem loops at the 5'-end of the West Nile virus genome	2014		24651762	3961380	10.1371/journal.pone.0092545	Structural basis for cytosolic double-stranded RNA surveillance by human oligoadenylate synthetase 1 Distinct antiviral roles for human 2',5'-oligoadenylate synthetase family members against dengue virus infection Global rigid body modeling of macromolecular complexes against small-angle scattering data Antiviral actions of interferons Full-length sequence and expression of the 42 kDa 2-5A synthetase induced by human interferon Flavivirus genome organization, expression, and replication
A new notosuchian from the Late Cretaceous of Brazil and the phylogeny of advanced notosuchians	scientific article	en:A new notosuchian from the Late Cretaceous of Brazil and the phylogeny of advanced notosuchians	2014		24695105	3973723	10.1371/journal.pone.0093105	A new baurusuchid (Crocodyliformes, Mesoeucrocodylia) from the late cretaceous of Brazil and the phylogeny of Baurusuchidae Crocodyliform biogeography during the Cretaceous: evidence of Gondwanan vicariance from biogeographical analysis
The slugs of Britain and Ireland: undetected and undescribed species increase a well-studied, economically important fauna by more than 20%	scientific article	en:The slugs of Britain and Ireland: undetected and undescribed species increase a well-studied, economically important fauna by more than 20%	2014		24740519	3989179	10.1371/journal.pone.0091907	DNA barcoding the native flowering plants and conifers of Wales Barcoding Fauna Bavarica: Myriapoda - a contribution to DNA sequence-based identifications of centipedes and millipedes (Chilopoda, Diplopoda)
A diminutive new tyrannosaur from the top of the world	scientific article	en:A diminutive new tyrannosaur from the top of the world	2014		24621577	3951350	10.1371/journal.pone.0091287	Tyrant dinosaur evolution tracks the rise and fall of Late Cretaceous oceans Mountain building triggered late cretaceous North American megaherbivore dinosaur radiation Reanalysis of "Raptorex kriegsteini": a juvenile tyrannosaurid dinosaur from Mongolia New horned dinosaurs from Utah provide evidence for intracontinental dinosaur endemism Olfactory acuity in theropods: palaeobiological and evolutionary implications The costs of carnivory
Hybrid speciation in a marine mammal: the clymene dolphin (Stenella clymene)	scientific article	en:Hybrid speciation in a marine mammal: the clymene dolphin (Stenella clymene)	2014		24421898	3885441	10.1371/journal.pone.0083645	Bayesian phylogenetics with BEAUti and the BEAST 1.7 The ecological genetics of homoploid hybrid speciation
A new species of river dolphin from Brazil or: how little do we know our biodiversity	scientific article	en:A new species of river dolphin from Brazil or: how little do we know our biodiversity	2014		24465386	3898917	10.1371/journal.pone.0083623	First human-caused extinction of a cetacean species? Evolution of river dolphins Independent adaptation to riverine habitats allowed survival of ancient cetacean lineages Inference of population structure using multilocus genotype data
The lion in West Africa is critically endangered	scientific article	en:The lion in West Africa is critically endangered	2014		24421889	3885426	10.1371/journal.pone.0083500	Will elephants soon disappear from West African savannahs? The origin, current diversity and future conservation of the modern lion (Panthera leo) Human demography and reserve size predict wildlife extinction in West Africa
Bacteria localization and chorion thinning among preterm premature rupture of membranes	scientific article	en:Bacteria localization and chorion thinning among preterm premature rupture of membranes	2014		24421883	3885429	10.1371/journal.pone.0083338	Diversity of the human intestinal microbial flora THE ENVIRONMENT AND DISEASE: ASSOCIATION OR CAUSATION?
A new sebecid from the paleogene of Brazil and the crocodyliform radiation after the K-Pg boundary	scientific article	en:A new sebecid from the paleogene of Brazil and the crocodyliform radiation after the K-Pg boundary	2014		24454686	3893294	10.1371/journal.pone.0081386	A new baurusuchid (Crocodyliformes, Mesoeucrocodylia) from the late cretaceous of Brazil and the phylogeny of Baurusuchidae New dyrosaurid crocodylomorph and evidences for faunal turnover at the K-P transition in Brazil
Autosomal recessive transmission of a rare KRT74 variant causes hair and nail ectodermal dysplasia: allelism with dominant woolly hair/hypotrichosis	scientific article	en:Autosomal recessive transmission of a rare KRT74 variant causes hair and nail ectodermal dysplasia: allelism with dominant woolly hair/hypotrichosis	2014		24714551	3979697	10.1371/journal.pone.0093607	Family with “pure” hair-nail ectodermal dysplasia Towards a unified classification of the ectodermal dysplasias: Opportunities outweigh challenges Hair-nail dysplasia - a new pure autosomal dominant ectodermal dysplasia Pili torti and Onychodysplasia Autosomal-dominant woolly hair resulting from disruption of keratin 74 (KRT74), a potential determinant of human hair texture
Molecular evolution of Zika virus during its emergence in the 20(th) century	scientific article	en:Molecular evolution of Zika virus during its emergence in the 20(th) century	2014	Zika virus Zika fever	24421913	3888466	10.1371/journal.pntd.0002636	Zika virus. I. Isolations and serological specificity Yellow fever and Zika virus epizootics and enzootics in Uganda
Imported zika virus infection from the cook islands into australia, 2014	scientific article	en:Imported zika virus infection from the cook islands into australia, 2014	2014	Zika virus Zika fever	24944843	4055592	10.1371/currents.outbreaks.4635a54dbffba2156fb2fd76dc49f65e	Zika virus outside Africa Zika virus. I. Isolations and serological specificity Genetic characterization of Zika virus strains: geographic expansion of the Asian lineage Genetic and serologic properties of Zika virus associated with an epidemic, Yap State, Micronesia, 2007 Zika virus infection acquired during brief travel to Indonesia Zika virus infection, Cambodia, 2010 Quantitative real-time PCR detection of Zika virus and evaluation with field-caught mosquitoes Genome microevolution of chikungunya viruses causing the Indian Ocean outbreak
Zika virus emergence in mosquitoes in southeastern Senegal, 2011	scientific article	en:Zika virus emergence in mosquitoes in southeastern Senegal, 2011	2014	Zika virus Zika fever	25310102	4195678	10.1371/journal.pone.0109442	Yellow fever and Zika virus epizootics and enzootics in Uganda
Why publishing everything is more effective than selective publishing of statistically significant results	scientific article	en:Why publishing everything is more effective than selective publishing of statistically significant results	2014		24465448	3894961	10.1371/journal.pone.0084896	Why selective publication of statistically significant results can be effective "Positive" results increase down the Hierarchy of the Sciences Negative results are disappearing from most disciplines and countries Advantages of excluding underpowered studies in meta-analysis: Inclusionist versus exclusionist viewpoints The file drawer problem and tolerance for null results The effects of psychotherapy for adult depression are overestimated: a meta-analysis of study quality and effect size Publication bias in clinical trials due to statistical significance or direction of trial results Publication bias in reports of animal stroke studies leads to major overstatement of efficacy Editors' Introduction to the Special Section on Replicability in Psychological Science: A Crisis of Confidence? Why most published research findings are false Publication bias and the failure of replication in experimental psychology Open access: The true cost of science publishing Let's Publish Fewer Papers Power failure: why small sample size undermines the reliability of neuroscience The Rules of the Game Called Psychological Science Publication bias in meta-analyses of the efficacy of psychotherapeutic interventions for schizophrenia An exploratory test for an excess of significant findings Too good to be true: Publication bias in two prominent studies from experimental psychology Publication bias in psychological science: Comment on Ferguson and Brannick (2012) Fixed Effects vs. Random Effects Meta-Analysis Models: Implications for Cumulative Research Knowledge How to do a meta-analysis Fixed- versus random-effects models in meta-analysis: Model properties and an empirical comparison of differences in results Publication bias in psychological science: Prevalence, methods for identifying and controlling, and implications for the use of meta-analyses Hypothesis tests for population heterogeneity in meta-analysis False-Positive Psychology: Undisclosed Flexibility in Data Collection and Analysis Allows Presenting Anything as Significant Excess Significance Bias in the Literature on Brain Volume Abnormalities Science or Art? How Aesthetic Standards Grease the Way Through the Publication Bottleneck but Undermine Science Why Most Discovered True Associations Are Inflated Scientific Utopia: I. Opening Scientific Communication Scientific Utopia: II. Restructuring Incentives and Practices to Promote Truth Over Publishability
Oxidative stress and reduced responsiveness of challenged circulating leukocytes following pulmonary instillation of metal-rich particulate matter in rats	scientific article	en:Oxidative stress and reduced responsiveness of challenged circulating leukocytes following pulmonary instillation of metal-rich particulate matter in rats	2014		25123171	4151022	10.1186/s12989-014-0034-8	Type I interferon and pattern recognition receptor signaling following particulate matter inhalation Response of the mouse lung transcriptome to welding fume: effects of stainless and mild steel fumes on lung gene expression in A/J and C57BL/6J mice Systemic microvascular dysfunction and inflammation after pulmonary particulate matter exposure Effects of Welding Fumes of Differing Composition and Solubility on Free Radical Production and Acute Lung Injury and Inflammation in Rats Residual Oil Fly Ash Increases the Susceptibility to Infection and Severely Damages the Lungs after Pulmonary Challenge with a Bacterial Pathogen
Nanoparticles, lung injury, and the role of oxidant stress	scientific article	en:Nanoparticles, lung injury, and the role of oxidant stress	2014		24215442	4408931	10.1146/annurev-physiol-030212-183735	Mechanisms of carbon nanotube-induced toxicity: focus on oxidative stress Impaired clearance and enhanced pulmonary inflammatory/fibrotic response to carbon nanotubes in myeloperoxidase-deficient mice Inhalation vs. aspiration of single-walled carbon nanotubes in C57BL/6 mice: inflammation, fibrosis, oxidative stress, and mutagenesis Alteration of deposition pattern and pulmonary response as a result of improved dispersion of aspirated single-walled carbon nanotubes in a mouse model Vitamin E deficiency enhances pulmonary inflammatory response and oxidative stress induced by single-walled carbon nanotubes in C57BL/6 mice Cardiovascular effects of pulmonary exposure to single-wall carbon nanotubes Unusual inflammatory and fibrogenic pulmonary responses to single-walled carbon nanotubes in mice Airborne particles of the california central valley alter the lungs of healthy adult rats Chronic exposure to high levels of particulate air pollution and small airway remodeling Ultrafine particulate pollutants induce oxidative stress and mitochondrial damage Epidemiologic evidence of cardiovascular effects of particulate air pollution Distribution of particulate matter and tissue remodeling in the human lung
Toxicity assessment of zinc oxide nanoparticles using sub-acute and sub-chronic murine inhalation models	scientific article	en:Toxicity assessment of zinc oxide nanoparticles using sub-acute and sub-chronic murine inhalation models	2014		24684892	3994238	10.1186/1743-8977-11-15	Interlaboratory evaluation of rodent pulmonary responses to engineered nanomaterials: the NIEHS Nano GO Consortium Effects of copper nanoparticle exposure on host defense in a murine pulmonary infection model Decreased dissolution of ZnO by iron doping yields nanoparticles with reduced toxicity in the rodent lung and zebrafish embryos The Influences of Cell Type and ZnO Nanoparticle Size on Immune Cell Cytotoxicity and Cytokine Induction Exploring the full spectrum of macrophage activation Development of Pulmonary Tolerance in Mice Exposed to Zinc Oxide Fumes
A murine monoclonal antibody with broad specificity for occupationally relevant diisocyanates	scientific article	en:A murine monoclonal antibody with broad specificity for occupationally relevant diisocyanates	2014		24369932	4624273	10.1080/15459624.2013.843783	Characterization of methylene diphenyl diisocyanate-haptenated human serum albumin and hemoglobin Toluene diisocyanate reactivity with glutathione across a vapor/liquid interface and subsequent transcarbamoylation of human albumin Monoclonal antibodies against toluene diisocyanate haptenated proteins from vapor-exposed mice Determinants of Isocyanate Exposures in Auto Body Repair and Refinishing Shops Development of immunoassays for biomonitoring of hexamethylene diisocyanate exposure
Obesity prevalence by occupation in Washington State, Behavioral Risk Factor Surveillance System	scientific article	en:Obesity prevalence by occupation in Washington State, Behavioral Risk Factor Surveillance System	2014		24406093	3887052	10.5888/pcd11.130219	Work, obesity, and occupational safety and health Obesity in US workers: The National Health Interview Survey, 1986 to 2002
Geographical variation in health-related quality of life among older US adults, 1997-2010	scientific article	en:Geographical variation in health-related quality of life among older US adults, 1997-2010	2014		24995652	4082433	10.5888/pcd11.140023	Health-related quality of life among older adults with arthritis
Case studies: evaluation of cut-resistant sleeves and possible fiberglass fiber shedding at a steel mill	scientific article	en:Case studies: evaluation of cut-resistant sleeves and possible fiberglass fiber shedding at a steel mill	2014		24369936	4525072	10.1080/15459624.2013.852283	Case studies: evaluation of cut-resistant sleeves and possible fiberglass fiber shedding at a steel mill
New NIOSH methods for sampling and analysis of airborne inorganic acids	scientific article	en:New NIOSH methods for sampling and analysis of airborne inorganic acids	2014		25153625	4544736	10.1080/15459624.2014.955183	Closed-face filter cassette (CFC) sampling-guidance on procedures for inclusion of material adhering to internal sampler surfaces
Retrospective assessment of exposure to chemicals for a microelectronics and business machine manufacturing facility	scientific article	en:Retrospective assessment of exposure to chemicals for a microelectronics and business machine manufacturing facility	2014		24224613	4517462	10.1080/15459624.2013.862591	Retrospective cohort study of a microelectronics and business machine facility Breast cancer risk in relation to occupations with exposure to carcinogens and endocrine disruptors: a Canadian case-control study
Enlarged pulmonary artery is predicted by vascular injury biomarkers and is associated with WTC-Lung Injury in exposed fire fighters: a case-control study	scientific article	en:Enlarged pulmonary artery is predicted by vascular injury biomarkers and is associated with WTC-Lung Injury in exposed fire fighters: a case-control study	2014		25270856	4179411	10.1136/bmjopen-2014-005575	Cardiovascular biomarkers predict susceptibility to lung injury in World Trade Center dust-exposed firefighters Inflammatory biomarkers predict airflow obstruction after exposure to World Trade Center dust Constrictive bronchiolitis in soldiers returning from Iraq and Afghanistan Obstructive airways disease with air trapping among firefighters exposed to World Trade Center dust
Considerations for recommending extended use and limited reuse of filtering facepiece respirators in health care settings	scientific article	en:Considerations for recommending extended use and limited reuse of filtering facepiece respirators in health care settings	2014		24628658	4610368	10.1080/15459624.2014.902954	Validation and application of models to predict facemask influenza contamination in healthcare settings Criteria for the collection of useful respirator performance data in the workplace Evaluation of respiratory protection programs and practices in California hospitals during the 2009-2010 H1N1 influenza pandemic The use of respirators to reduce inhalation of airborne biological agents Detection of infectious influenza virus in cough aerosols generated in a simulated patient examination room Evaluation of microwave steam bags for the decontamination of filtering facepiece respirators Development of a test system to apply virus-containing particles to filtering facepiece respirators for the evaluation of decontamination procedures
Role of oxygen and the OxyR protein in the response to iron limitation in Rhodobacter sphaeroides	scientific article	en:Role of oxygen and the OxyR protein in the response to iron limitation in Rhodobacter sphaeroides	2014		25220182	4176601	10.1186/1471-2164-15-794	READemption-a tool for the computational analysis of deep-sequencing-based transcriptome data
The effects of vibration-reducing gloves on finger vibration	scientific article	en:The effects of vibration-reducing gloves on finger vibration	2014-01	human factors and ergonomics	26543297	4630214	10.1016/j.ergon.2013.10.003	Vibration-reducing gloves: transmissibility at the palm of the hand in three orthogonal directions
Evaluation of pump pulsation in respirable size-selective sampling: part I. Pulsation measurements	scientific article	en:Evaluation of pump pulsation in respirable size-selective sampling: part I. Pulsation measurements	2014-01		24064962	4621492	10.1093/annhyg/met047	Performance of high flow rate samplers for respirable particle collection
Evaluation of pump pulsation in respirable size-selective sampling: part II. Changes in sampling efficiency	scientific article	en:Evaluation of pump pulsation in respirable size-selective sampling: part II. Changes in sampling efficiency	2014-01		24064963	4607266	10.1093/annhyg/met048	Evaluation of pump pulsation in respirable size-selective sampling: part I. Pulsation measurements Performance of high flow rate samplers for respirable particle collection
Long-term effects of carbon containing engineered nanomaterials and asbestos in the lung: one year postexposure comparisons	scientific article	en:Long-term effects of carbon containing engineered nanomaterials and asbestos in the lung: one year postexposure comparisons	2014-01-15	cell biology	24213921	3920208	10.1152/ajplung.00167.2013	Nanotechnology: toxicologic pathology Carbon nanotubes enhance metastatic growth of lung carcinoma via up-regulation of myeloid-derived suppressor cells Factoring-in agglomeration of carbon nanotubes and nanofibers for better prediction of their toxicity versus asbestos Comparative proteomics and pulmonary toxicity of instilled single-walled carbon nanotubes, crocidolite asbestos, and ultrafine carbon black in mice Raw single-wall carbon nanotubes induce oxidative stress and activate MAPKs, AP-1, NF-kappaB, and Akt in normal and malignant human mesothelial cells Inhalation vs. aspiration of single-walled carbon nanotubes in C57BL/6 mice: inflammation, fibrosis, oxidative stress, and mutagenesis Alteration of deposition pattern and pulmonary response as a result of improved dispersion of aspirated single-walled carbon nanotubes in a mouse model Unusual inflammatory and fibrogenic pulmonary responses to single-walled carbon nanotubes in mice Increased expression of integrin-linked kinase is associated with shorter survival in non-small cell lung cancer Reactive oxygen species: their relation to pneumoconiosis and carcinogenesis
Zika virus in Gabon (Central Africa)--2007: a new threat from Aedes albopictus?	scientific article	en:Zika virus in Gabon (Central Africa)--2007: a new threat from Aedes albopictus?	2014-02	Zika virus Zika fever Asian tiger mosquito	24516683	3916288	10.1371/journal.pntd.0002681	Zika virus. I. Isolations and serological specificity Genetic characterization of Zika virus strains: geographic expansion of the Asian lineage Arthropod-borne viral infections of man in Nigeria, 1964-1970 Zika virus infections in Nigeria: virological and seroepidemiological investigations in Oyo State Zika Virus Infection in Man Twelve isolations of Zika virus from Aedes (Stegomyia) africanus (Theobald) taken in and above a Uganda forest
Handling of thermal receipts as a source of exposure to bisphenol A	scientific article	en:Handling of thermal receipts as a source of exposure to bisphenol A	2014-02-26		24570250	4685668	10.1001/jama.2013.283735	Urinary bisphenol A concentrations and early reproductive health outcomes among women undergoing IVF
Psychophysical basis for maximum pushing and pulling forces: A review and recommendations	scientific article	en:Psychophysical basis for maximum pushing and pulling forces: A review and recommendations	2014-03	human factors and ergonomics	26664045	4672999	10.1016/j.ergon.2012.09.005	Volitional postures during maximal push/pull exertions in the sagittal plane
The Semanticscience Integrated Ontology (SIO) for biomedical research and knowledge discovery	scientific article	en:The Semanticscience Integrated Ontology (SIO) for biomedical research and knowledge discovery	2014-03-06		24602174	4015691	10.1186/2041-1480-5-14	Pharmacogenomics knowledge for personalized medicine The Semantic Automated Discovery and Integration (SADI) Web service Design-Pattern, API and Reference Implementation DrugBank 3.0: a comprehensive resource for 'omics' research on drugs Adding a little reality to building ontologies for biology Ontology Design Patterns for bio-ontologies: a case study on the Cell Cycle Ontology The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration Relations in biomedical ontologies
A New Large-Bodied Oviraptorosaurian Theropod Dinosaur from the Latest Cretaceous of Western North America	scientific article	en:A New Large-Bodied Oviraptorosaurian Theropod Dinosaur from the Latest Cretaceous of Western North America	2014-03-19		24647078	3960162	10.1371/journal.pone.0092022	A new oviraptorosaur (Dinosauria: Oviraptorosauria) from the late cretaceous of southern China and its paleoecological implications New specimens of Nemegtomaia from the Baruungoyot and Nemegt Formations (Late Cretaceous) of Mongolia Spatial niche partitioning in dinosaurs from the latest cretaceous (Maastrichtian) of North America
Hearing impairment associated with depression in US adults, National Health and Nutrition Examination Survey 2005-2010	scientific article	en:Hearing impairment associated with depression in US adults, National Health and Nutrition Examination Survey 2005-2010	2014-04		24604103	4102382	10.1001/jamaoto.2014.42	The PHQ-9: validity of a brief depression severity measure
Ten simple rules for the care and feeding of scientific data	scientific article	en:Ten simple rules for the care and feeding of scientific data	2014-04		24763340	3998871	10.1371/journal.pcbi.1003542	Sidereus Nuncius The Assayer Increasing public access to the results of scientific research URL decay in MEDLINE--a 4-year follow-up study Publish your computer code: it is good enough Practices in source code sharing in astrophysics Ten simple rules for the open development of scientific software The data paper: a mechanism to incentivize data publishing in biodiversity science If we share data, will anyone use them? Data sharing and reuse in the long tail of science and technology For Attribution -- Developing Data Attribution and Citation Practices and Standards Amsterdam Manifesto on Data Citation Principles
Effect of fiber length on carbon nanotube-induced fibrogenesis	scientific article	en:Effect of fiber length on carbon nanotube-induced fibrogenesis	2014-04-29	organic chemistry catalysis	24786100	4057682	10.3390/ijms15057444	Distribution and fibrotic response following inhalation exposure to multi-walled carbon nanotubes Factoring-in agglomeration of carbon nanotubes and nanofibers for better prediction of their toxicity versus asbestos Impaired clearance and enhanced pulmonary inflammatory/fibrotic response to carbon nanotubes in myeloperoxidase-deficient mice Reactive oxygen species-mediated p38 MAPK regulates carbon nanotube-induced fibrogenic and angiogenic responses Pulmonary fibrotic response to aspiration of multi-walled carbon nanotubes Dispersion of single-walled carbon nanotubes by a natural lung surfactant for pulmonary in vitro and in vivo toxicity studies Raw single-wall carbon nanotubes induce oxidative stress and activate MAPKs, AP-1, NF-kappaB, and Akt in normal and malignant human mesothelial cells Inhalation vs. aspiration of single-walled carbon nanotubes in C57BL/6 mice: inflammation, fibrosis, oxidative stress, and mutagenesis Alteration of deposition pattern and pulmonary response as a result of improved dispersion of aspirated single-walled carbon nanotubes in a mouse model Principles for characterizing the potential human health effects from exposure to nanomaterials: elements of a screening strategy Unusual inflammatory and fibrogenic pulmonary responses to single-walled carbon nanotubes in mice Cell surface-localized matrix metalloproteinase-9 proteolytically activates TGF-beta and promotes tumor invasion and angiogenesis
A unified classification of alien species based on the magnitude of their environmental impacts	scientific article	en:A unified classification of alien species based on the magnitude of their environmental impacts	2014-05		24802715	4011680	10.1371/journal.pbio.1001850	Economic and environmental impacts of harmful non-indigenous species in southeast Asia
Examining occupational health and safety disparities using national data: a cause for continuing concern	scientific article	en:Examining occupational health and safety disparities using national data: a cause for continuing concern	2014-05		24436156	4556419	10.1002/ajim.22297	Discrimination, harassment, abuse, and bullying in the workplace: contribution of workplace injustice to occupational health disparities Promoting integrated approaches to reducing health inequities among low-income workers: applying a social ecological framework Disparities in work-related homicide rates in selected retail industries in the United States, 2003-2008 Economic burden of occupational injury and illness in the United States Occupation as Socioeconomic Status or Environmental Exposure? A Survey of Practice Among Population-based Cardiovascular Studies in the United States
Temporal changes in the required shoe-floor friction when walking following an induced slip	scientific article	en:Temporal changes in the required shoe-floor friction when walking following an induced slip	2014-05-02		24789299	4008576	10.1371/journal.pone.0096525	Age-related slip avoidance strategy while walking over a known slippery floor surface Effects of age-related gait changes on the biomechanics of slips and falls
Correction: A Computational Analysis of Limb and Body Dimensions in Tyrannosaurus rex with Implications for Locomotion, Ontogeny, and Growth	scientific article	en:Correction: A Computational Analysis of Limb and Body Dimensions in Tyrannosaurus rex with Implications for Locomotion, Ontogeny, and Growth	2014-05-05			4010492	10.1371/journal.pone.0097055	A computational analysis of limb and body dimensions in Tyrannosaurus rex with implications for locomotion, ontogeny, and growth
Precision genome engineering and agriculture: opportunities and regulatory challenges	scientific article	en:Precision genome engineering and agriculture: opportunities and regulatory challenges	2014-06		24915127	4051594	10.1371/journal.pbio.1001877	Targeting DNA double-strand breaks with TAL effector nucleases High-frequency modification of plant genes using engineered zinc-finger nucleases A combinatorial approach to create artificial homing endonucleases cleaving chosen sequences
Etymologia: Zika Virus	scientific article	en:Etymologia: Zika Virus	2014-06	Zika virus Zika fever			10.3201/eid2006.et2006	Zika virus. I. Isolations and serological specificity
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What influences youth to operate all-terrain vehicles safely?	scientific article	en:What influences youth to operate all-terrain vehicles safely?	2014-06		24740837	4072908	10.1093/her/cyu016	All-Terrain Vehicle-Related Nonfatal Injuries Among Young Riders in the United States, 2001-2010 Using Protection Motivation Theory and Formative Research to Guide an Injury Prevention Intervention: Increasing Adherence to the North American Guidelines for Children's Agricultural Tasks Fatal agricultural injuries in preschool children: risks, injury patterns and strategies for prevention
Measurement of mass-based carbon nanotube penetration through filtering facepiece respirator filtering media	scientific article	en:Measurement of mass-based carbon nanotube penetration through filtering facepiece respirator filtering media	2014-06		24802251	4305111	10.1093/annhyg/meu005	Occupational exposure assessment in carbon nanotube and nanofiber primary and secondary manufacturers: mobile direct-reading sampling Organic and elemental carbon filter sets: preparation method and interlaboratory results Occupational exposure assessment in carbon nanotube and nanofiber primary and secondary manufacturers Exposure and emissions monitoring during carbon nanofiber production--Part I: elemental carbon and iron-soot aerosols Aerosol monitoring during carbon nanofiber production: mobile direct-reading sampling Inhalation vs. aspiration of single-walled carbon nanotubes in C57BL/6 mice: inflammation, fibrosis, oxidative stress, and mutagenesis Unusual inflammatory and fibrogenic pulmonary responses to single-walled carbon nanotubes in mice
Regulatory T cells modulate granulomatous inflammation in an HLA-DP2 transgenic murine model of beryllium-induced disease	scientific article	en:Regulatory T cells modulate granulomatous inflammation in an HLA-DP2 transgenic murine model of beryllium-induced disease	2014-06-10		24912188	4060652	10.1073/pnas.1408048111	Crystal structure of HLA-DP2 and implications for chronic beryllium disease HLA-DPB1 and Chronic Beryllium Disease: A HuGE Review
Ischemic stroke injury is mediated by aberrant Cdk5	scientific article	en:Ischemic stroke injury is mediated by aberrant Cdk5	2014-06-11		24920629	4051977	10.1523/JNEUROSCI.4368-13.2014	Striatal dysregulation of Cdk5 alters locomotor responses to cocaine, motor learning, and dendritic morphology Phosphorylation of DARPP-32 by Cdk5 modulates dopamine signalling in neurons
Correlation as a determinant of configurational entropy in supramolecular and protein systems	scientific article	en:Correlation as a determinant of configurational entropy in supramolecular and protein systems	2014-06-19		24702693	4067153	10.1021/jp411588b	Thermodynamic and Differential Entropy under a Change of Variables Efficient calculation of configurational entropy from molecular simulations by combining the mutual-information expansion and nearest-neighbor methods
Current Zika virus epidemiology and recent epidemics	scientific article	en:Current Zika virus epidemiology and recent epidemics	2014-07	Zika virus Zika fever	25001879		10.1016/j.medmal.2014.04.008	Full-length sequencing and genomic characterization of Bagaza, Kedougou, and Zika viruses
Imaging mass spectrometry of diversified cardiolipin molecular species in the brain	scientific article	en:Imaging mass spectrometry of diversified cardiolipin molecular species in the brain	2014-07-01		24949523	4082390	10.1021/ac5011876	A mitochondrial pathway for biosynthesis of lipid mediators Cardiolipin externalization to the outer mitochondrial membrane acts as an elimination signal for mitophagy in neuronal cells Dual function of mitochondrial Nm23-H4 protein in phosphotransfer and intermembrane lipid transfer: a cardiolipin-dependent switch Lipidomics identifies cardiolipin oxidation as a mitochondrial target for redox therapy of brain injury Oxidized phospholipids as biomarkers of tissue and cell damage with a focus on cardiolipin Making heads or tails of phospholipids in mitochondria Mass-spectrometry based oxidative lipidomics and lipid imaging: applications in traumatic brain injury Cytochrome c/cardiolipin relations in mitochondria: a kiss of death Relationship between lipid saturation and lipid-protein interaction in liver mitochondria modified by catalytic hydrogenation with reference to cardiolipin molecular species
Spread of artemisinin resistance in Plasmodium falciparum malaria	scientific article	en:Spread of artemisinin resistance in Plasmodium falciparum malaria	2014-07-31	malaria	25075834	4143591	10.1056/NEJMoa1314981	Emergence of artemisinin-resistant malaria on the western border of Thailand: a longitudinal study Changes in the treatment responses to artesunate-mefloquine on the northwestern border of Thailand during 13 years of continuous deployment Impact of artemisinin-based combination therapy and insecticide-treated nets on malaria burden in Zanzibar
Photothermal desorption of single-walled carbon nanotubes and coconut shell-activated carbons using a continuous light source for application in air sampling	scientific article	en:Photothermal desorption of single-walled carbon nanotubes and coconut shell-activated carbons using a continuous light source for application in air sampling	2014-08		25016598	4184402	10.1093/annhyg/meu043	A black body absorber from vertically aligned single-walled carbon nanotubes
Validation and application of models to predict facemask influenza contamination in healthcare settings	scientific article	en:Validation and application of models to predict facemask influenza contamination in healthcare settings	2014-08		24593662	4485436	10.1111/risa.12185	Challenge of N95 filtering facepiece respirators with viable H1N1 influenza aerosols Dispersion and exposure to a cough-generated aerosol in a simulated medical examination room Quantity and size distribution of cough-generated aerosol particles produced by influenza patients during and after illness Detection of infectious influenza virus in cough aerosols generated in a simulated patient examination room Evaluation of microwave steam bags for the decontamination of filtering facepiece respirators Distribution of Airborne Influenza Virus and Respiratory Syncytial Virus in an Urgent Care Medical Clinic Evaluation of five decontamination methods for filtering facepiece respirators Development of a test system to evaluate procedures for decontamination of respirators containing viral droplets Development of a test system to apply virus-containing particles to filtering facepiece respirators for the evaluation of decontamination procedures
Toluene diisocyanate (TDI) disposition and co-localization of immune cells in hair follicles	scientific article	en:Toluene diisocyanate (TDI) disposition and co-localization of immune cells in hair follicles	2014-08-01		24798378	4176049	10.1093/toxsci/kfu079	Development of monoclonal antibodies to recombinant terrelysin and characterization of expression in Aspergillus terreus Monoclonal antibodies to hyphal exoantigens derived from the opportunistic pathogen Aspergillus terreus Skin Exposure to Aliphatic Polyisocyanates in the Auto Body Repair and Refinishing Industry: II. A Quantitative Assessment The dermis contains langerin+ dendritic cells that develop and function independently of epidermal Langerhans cells Inhalation of Toluene Diisocyanate Vapor Induces Allergic Rhinitis in Mice Skin exposure to isocyanates: reasons for concern
Functional high-throughput screening identifies the miR-15 microRNA family as cellular restriction factors for Salmonella infection		en:Functional high-throughput screening identifies the miR-15 microRNA family as cellular restriction factors for Salmonella infection	2014-08-22				10.1038/ncomms5718	READemption-a tool for the computational analysis of deep-sequencing-based transcriptome data
Multi-state modeling of biomolecules	scholarly article	en:Multi-state modeling of biomolecules	2014-09	multi-state modeling of biomolecules	25254957	4201162	10.1371/journal.pcbi.1003844	Scalable rule-based modelling of allosteric proteins and biochemical networks RuleMonkey: software for stochastic simulation of rule-based models
Convergence of mortality rates among patients on antiretroviral therapy in South Africa and North America	scientific article	en:Convergence of mortality rates among patients on antiretroviral therapy in South Africa and North America	2014-09		25202913	4159121	10.1371/journal.pmed.1001719	The role of social capital in successful adherence to antiretroviral therapy in Africa
Ontogeny of recognition specificity and functionality for the broadly neutralizing anti-HIV antibody 4E10	scientific article	en:Ontogeny of recognition specificity and functionality for the broadly neutralizing anti-HIV antibody 4E10	2014-09	HIV	25254371	4177983	10.1371/journal.ppat.1004403	IMGT/V-QUEST: the highly customized and integrated system for IG and TR standardized V-J and V-D-J sequence analysis MolProbity: all-atom contacts and structure validation for proteins and nucleic acids Comprehensive cross-clade neutralization analysis of a panel of anti-human immunodeficiency virus type 1 monoclonal antibodies The Protein Data Bank Kabat database and its applications: 30 years after the first variability plot
Rapid impact of effective treatment on transmission of multidrug-resistant tuberculosis	scientific article	en:Rapid impact of effective treatment on transmission of multidrug-resistant tuberculosis	2014-09		25189547	4692272	10.5588/ijtld.13.0834	Natural infection of guinea pigs exposed to patients with highly drug-resistant tuberculosis
Marginal structural models in occupational epidemiology: application in a study of ischemic heart disease incidence and PM2.5 in the US aluminum industry	scientific article	en:Marginal structural models in occupational epidemiology: application in a study of ischemic heart disease incidence and PM2.5 in the US aluminum industry	2014-09-15		25125691	4157703	10.1093/aje/kwu175	Development of a job-exposure matrix for exposure to total and fine particulate matter in the aluminum industry Incident ischemic heart disease and recent occupational exposure to particulate matter in an aluminum cohort Healthy worker survivor bias: implications of truncating follow-up at employment termination PM2.5 metal exposures and nocturnal heart rate variability: a panel study of boilermaker construction workers Association of air pollution with increased incidence of ventricular tachyarrhythmias recorded by implanted cardioverter defibrillators
Wikidata: A Free Collaborative Knowledgebase	scholarly article	en:Wikidata: a free collaborative knowledgebase	2014-10	Wikidata			10.1145/2629489	How Wikipedia Works MediaWiki
Characterization of uncultivable bat influenza virus using a replicative synthetic virus	scientific article	en:Characterization of uncultivable bat influenza virus using a replicative synthetic virus	2014-10		25275541	4183581	10.1371/journal.ppat.1004420	New world bats harbor diverse influenza A viruses
Aedes hensilli as a potential vector of Chikungunya and Zika viruses	scientific article	en:Aedes hensilli as a potential vector of Chikungunya and Zika viruses	2014-10	Zika virus Zika fever Chikungunya Virus chikungunya	25299181	4191940	10.1371/journal.pntd.0003188	Zika virus. II. Pathogenicity and physical properties
Aerosols and criteria gases in an underground mine that uses FAME biodiesel blends	scientific article	en:Aerosols and criteria gases in an underground mine that uses FAME biodiesel blends	2014-10		25060241	4505372	10.1093/annhyg/meu049	Toward Developing A New Occupational Exposure Metric Approach for Characterization of Diesel Aerosols Biodiesel versus diesel exposure: enhanced pulmonary inflammation, oxidative stress, and differential morphological changes in the mouse lung Combustion-derived nanoparticles: a review of their toxicology following inhalation exposure
Lung biodurability and free radical production of cellulose nanomaterials	scientific article	en:Lung biodurability and free radical production of cellulose nanomaterials	2014-10		25265049	4522936	10.3109/08958378.2014.948650	Comparison of stainless and mild steel welding fumes in generation of reactive oxygen species
Small mine size is associated with lung function abnormality and pneumoconiosis among underground coal miners in Kentucky, Virginia and West Virginia	scientific article	en:Small mine size is associated with lung function abnormality and pneumoconiosis among underground coal miners in Kentucky, Virginia and West Virginia	2014-10		25052085	4593400	10.1136/oemed-2014-102224	Coal workers' pneumoconiosis and progressive massive fibrosis are increasingly more prevalent among workers in small underground coal mines in the United States Pneumoconiosis among underground bituminous coal miners in the United States: is silicosis becoming more frequent? Rapidly progressive coal workers' pneumoconiosis in the United States: geographic clustering and other factors Clinically important FEV1 declines among coal miners: an exploration of previously unrecognised determinants
An evaluation of sharp cut cyclones for sampling diesel particulate matter aerosol in the presence of respirable dust	scientific article	en:An evaluation of sharp cut cyclones for sampling diesel particulate matter aerosol in the presence of respirable dust	2014-10		25060240	4540237	10.1093/annhyg/meu045	The Diesel Exhaust in Miners study: a nested case-control study of lung cancer and diesel exhaust The Diesel Exhaust in Miners study: a cohort mortality study with emphasis on lung cancer Characterization and control of airborne particles emitted during production of epoxy/carbon nanotube nanocomposites The Diesel Exhaust in Miners Study: III. Interrelations between respirable elemental carbon and gaseous and particulate components of diesel exhaust derived from area sampling in underground non-metal mining facilities
A murine inhalation model to characterize pulmonary exposure to dry Aspergillus fumigatus conidia	scientific article	en:A murine inhalation model to characterize pulmonary exposure to dry Aspergillus fumigatus conidia	2014-10-23		25340353	4207673	10.1371/journal.pone.0109855	Role of germination in murine airway CD8+ T-cell responses to Aspergillus conidia Murine models of airway fungal exposure and allergic sensitization Inhalation vs. aspiration of single-walled carbon nanotubes in C57BL/6 mice: inflammation, fibrosis, oxidative stress, and mutagenesis Detection and quantitation of eosinophils in the murine respiratory tract by flow cytometry Study of toxin production by isolates of Stachybotrys chartarum and Memnoniella echinata isolated during a study of pulmonary hemosiderosis in infants
Human cytomegalovirus vaccine based on the envelope gH/gL pentamer complex	scientific article	en:Human cytomegalovirus vaccine based on the envelope gH/gL pentamer complex	2014-11		25412505	4239111	10.1371/journal.ppat.1004524	Vaccine prevention of maternal cytomegalovirus infection Cloning the vaccinia virus genome as a bacterial artificial chromosome in Escherichia coli and recovery of infectious virus in mammalian cells A rapid alkaline extraction procedure for screening recombinant plasmid DNA
First case of Zika virus infection in a returning Canadian traveler	scientific article	en:First case of Zika virus infection in a returning Canadian traveler	2014-11	Zika virus Zika fever	25294619	4228871	10.4269/ajtmh.14-0151	Zika virus. I. Isolations and serological specificity
Self-reported physical work exposures and incident carpal tunnel syndrome	scientific article	en:Self-reported physical work exposures and incident carpal tunnel syndrome	2014-11		25223617	4501479	10.1002/ajim.22359	Using Job-Title-Based Physical Exposures From O*NET in an Epidemiological Study of Carpal Tunnel Syndrome A prospective study of carpal tunnel syndrome: workplace and individual risk factors Workplace and individual risk factors for carpal tunnel syndrome Reliability of job-title based physical work exposures for the upper extremity: comparison to self-reported and observed exposure estimates Assessing agreement of self-reported and observed physical exposures of the upper extremity
Molecular speciation and dynamics of oxidized triacylglycerols in lipid droplets: Mass spectrometry and coarse-grained simulations	scientific article	en:Molecular speciation and dynamics of oxidized triacylglycerols in lipid droplets: Mass spectrometry and coarse-grained simulations	2014-11		25110833	4276254	10.1016/j.freeradbiomed.2014.07.042	Specificity of lipoprotein-associated phospholipase A(2) toward oxidized phosphatidylserines: liquid chromatography-electrospray ionization mass spectrometry characterization of products and computer modeling of interactions Mass-spectrometric characterization of peroxidized and hydrolyzed lipids in plasma and dendritic cells of tumor-bearing animals Lipid accumulation and dendritic cell dysfunction in cancer
Human and animal evidence supports lower occupational exposure limits for poorly-soluble respirable particles: Letter to the Editor	scientific article	en:Human and animal evidence supports lower occupational exposure limits for poorly-soluble respirable particles: Letter to the Editor re: 'Low-toxicity dusts: Current exposure guidelines are not sufficiently protective' by Cherrie, Brosseau, Hay and Donaldson	2014-11		25193937	4618468	10.1093/annhyg/meu058	Respiratory disease mortality among US coal miners; results after 37 years of follow-up Comparative Pathology of Environmental Lung Disease: An Overview
Assessment and indirect adjustment for confounding by smoking in cohort studies using relative hazards models	scientific article	en:Assessment and indirect adjustment for confounding by smoking in cohort studies using relative hazards models	2014-11-01		25245043	4375397	10.1093/aje/kwu211	Radon Exposure and Mortality Among White and American Indian Uranium Miners: An Update of the Colorado Plateau Cohort Mortality in relation to smoking: 50 years' observations on male British doctors Quantitative evaluation of the effects of uncontrolled confounding by alcohol and tobacco in occupational cancer studies
Examining Pre-migration Health Among Filipino Nurses	scientific article	en:Examining Pre-migration Health Among Filipino Nurses	2014-11-11		25385090	4427529	10.1007/s10903-014-0131-7	Explaining low mortality among US immigrants relative to native-born Americans: the role of smoking Nurse migration from a source country perspective: Philippine country case study
The transformative nature of transparency in research funding	academic article	en:The transformative nature of transparency in research funding	2014-12	funding of science	25549343	4280101	10.1371/journal.pbio.1002027	Grant application review: the case of transparency Peer review for improving the quality of grant applications Research efficiency: Turn the scientific method on ourselves Restructuring Research: Communication Costs and the Democratization of University Innovation Open Collaboration for Innovation: Principles and Performance Continuous Integration for Concurrent MOOSE Framework and Application Development on GitHub Could Participatory Budgeting Work in the United States? The Large Hadron Collider: lessons learned and summary Raising money for scientific research through crowdfunding Peer reviews: make them public Interactive Open Access Peer Review: The Atmospheric Chemistry and Physics Model Ten simple rules for getting grants Research grants: Conform and be funded Sources of funding for Nobel Prize-winning work: public or private? More time for research: Fund people not projects This revolution will be digitized: online tools for radical collaboration Crowdsourcing knowledge discovery and innovations in medicine Crowd science: The organization of scientific research in open collaborative projects Massively collaborative mathematics Open-Source Genomic Analysis of Shiga-Toxin–Producing E. coli O104:H4 Research efficiency: Perverse incentives Cost of the NSERC Science Grant Peer Review System Exceeds the Cost of Giving Every Qualified Researcher a Baseline Grant A call for NIH youth movement Big Science vs. Little Science: How Scientific Impact Scales with Funding
Epistatic adaptive evolution of human color vision	scientific article	en:Epistatic adaptive evolution of human color vision	2014-12		25522367	4270479	10.1371/journal.pgen.1004884	A molecular phylogeny of living primates The molecular genetics and evolution of red and green color vision in vertebrates Visual pigments of rods and cones in a human retina
Positive psychological factors are associated with lower PTSD symptoms among police officers: post Hurricane Katrina	scientific article	en:Positive psychological factors are associated with lower PTSD symptoms among police officers: post Hurricane Katrina	2014-12		25476965	4676265	10.1002/smi.2615	What good are positive emotions in crises? A prospective study of resilience and emotions following the terrorist attacks on the United States on September 11th, 2001
The effectiveness of insurer-supported safety and health engineering controls in reducing workers' compensation claims and costs	scientific article	en:The effectiveness of insurer-supported safety and health engineering controls in reducing workers' compensation claims and costs	2014-12		25223846	4504420	10.1002/ajim.22372	An evaluation of a "best practices" musculoskeletal injury prevention program in nursing homes
A review of sleep deprivation studies evaluating the brain transcriptome	scientific article	en:A review of sleep deprivation studies evaluating the brain transcriptome	2014-12-11		25932362	4409616	10.1186/2193-1801-3-728	Effects of insufficient sleep on circadian rhythmicity and expression amplitude of the human blood transcriptome Repeated exposure to severely limited sleep results in distinctive and persistent physiological imbalances in rats Local sleep in awake rats Meta-analysis of short sleep duration and obesity in children and adults A prospective study of change in sleep duration: associations with mortality in the Whitehall II cohort Characterization of sleep in zebrafish and insomnia in hypocretin receptor mutants A role for cryptochromes in sleep regulation
Ninety-eight new species of Trigonopterus weevils from Sundaland and the Lesser Sunda Islands	scientific article	en:Ninety-eight new species of Trigonopterus weevils from Sundaland and the Lesser Sunda Islands	2014-12-22	Trigonopterus	25610340	4296478	10.3897/zookeys.467.8206	One hundred and one new species of Trigonopterus weevils from New Guinea Integrative taxonomy on the fast track - towards more sustainability in biodiversity research DNA barcoding for community ecology--how to tackle a hyperdiverse, mostly undescribed Melanesian fauna
Geological and taphonomic context for the new hominin species Homo naledi from the Dinaledi Chamber, South Africa	scientific article	en:Geological and taphonomic context for the new hominin species Homo naledi from the Dinaledi Chamber, South Africa	2015	Homo naledi	26354289	4559842	10.7554/eLife.09561	Homo naledi, a new species of the genus Homo from the Dinaledi Chamber, South Africa
Making Mosquito Taxonomy Useful: A Stable Classification of Tribe Aedini that Balances Utility with Current Knowledge of Evolutionary Relationships	scientific article	en:Making Mosquito Taxonomy Useful: A Stable Classification of Tribe Aedini that Balances Utility with Current Knowledge of Evolutionary Relationships	2015		26226613	4520491	10.1371/journal.pone.0133602	Ilheus virus isolation in the Pantanal, west-central Brazil New vectors of Rift Valley fever in West Africa
Assessing Odor Level when Using PrePex for HIV Prevention: A Prospective, Randomized, Open Label, Blinded Assessor Trial to Improve Uptake of Male Circumcision	scientific article	en:Assessing Odor Level when Using PrePex for HIV Prevention: A Prospective, Randomized, Open Label, Blinded Assessor Trial to Improve Uptake of Male Circumcision	2015	HIV	26023772	4449041	10.1371/journal.pone.0126664	Randomized, controlled intervention trial of male circumcision for reduction of HIV infection risk: the ANRS 1265 Trial
The Oldest Case of Decapitation in the New World (Lapa do Santo, East-Central Brazil)	scientific article	en:The Oldest Case of Decapitation in the New World (Lapa do Santo, East-Central Brazil)	2015	decapitation	26397983	4580647	10.1371/journal.pone.0137456	Testing evolutionary and dispersion scenarios for the settlement of the new world A reassessment of human cranial plasticity: Boas revisited
Castanea sativa (European Chestnut) Leaf Extracts Rich in Ursene and Oleanene Derivatives Block Staphylococcus aureus Virulence and Pathogenesis without Detectable Resistance	scientific article	en:Castanea sativa (European Chestnut) Leaf Extracts Rich in Ursene and Oleanene Derivatives Block Staphylococcus aureus Virulence and Pathogenesis without Detectable Resistance	2015		26295163	4546677	10.1371/journal.pone.0136486	Topographical and temporal diversity of the human skin microbiome Nasal carriage of Staphylococcus aureus: epidemiology, underlying mechanisms, and associated risks Synthesis of staphylococcal virulence factors is controlled by a regulatory RNA molecule
Three new species of woodlizards (Hoplocercinae, Enyalioides) from northwestern South America	scientific article	en:Three new species of woodlizards (Hoplocercinae, Enyalioides) from northwestern South America	2015		25901116	4400379	10.3897/zookeys.494.8903	Two sympatric new species of woodlizards (Hoplocercinae, Enyalioides ) from Cordillera Azul National Park in northeastern Peru
Bidirectional Echolocation in the Bat Barbastella barbastellus: Different Signals of Low Source Level Are Emitted Upward through the Nose and Downward through the Mouth	scientific article	en:Bidirectional Echolocation in the Bat Barbastella barbastellus: Different Signals of Low Source Level Are Emitted Upward through the Nose and Downward through the Mouth	2015		26352271	4564259	10.1371/journal.pone.0135590	Echolocating bats cry out loud to detect their prey
Papio Cranium from the Hominin-Bearing Site of Malapa: Implications for the Evolution of Modern Baboon Cranial Morphology and South African Plio-Pleistocene Biochronology	scientific article	en:Papio Cranium from the Hominin-Bearing Site of Malapa: Implications for the Evolution of Modern Baboon Cranial Morphology and South African Plio-Pleistocene Biochronology	2015		26287673	4545885	10.1371/journal.pone.0133361	Mitochondrial phylogeography of baboons (Papio spp.): indication for introgressive hybridization?
Cranial Anatomy of Wendiceratops pinhornensis gen. et sp. nov., a Centrosaurine Ceratopsid (Dinosauria: Ornithischia) from the Oldman Formation (Campanian), Alberta, Canada, and the Evolution of Ceratopsid Nasal Ornamentation	scientific article	en:Cranial Anatomy of Wendiceratops pinhornensis gen. et sp. nov., a Centrosaurine Ceratopsid (Dinosauria: Ornithischia) from the Oldman Formation (Campanian), Alberta, Canada, and the Evolution of Ceratopsid Nasal Ornamentation	2015		26154293	4496092	10.1371/journal.pone.0130007	Feeding height stratification among the herbivorous dinosaurs from the Dinosaur Park Formation (upper Campanian) of Alberta, Canada Dinosaur census reveals abundant Tyrannosaurus and rare ontogenetic stages in the Upper Cretaceous Hell Creek Formation (Maastrichtian), Montana, USA
Miocene Fossils Reveal Ancient Roots for New Zealand's Endemic Mystacina (Chiroptera) and Its Rainforest Habitat	scientific article	en:Miocene Fossils Reveal Ancient Roots for New Zealand's Endemic Mystacina (Chiroptera) and Its Rainforest Habitat	2015		26083758	4470663	10.1371/journal.pone.0128871	New Myzopodidae (Chiroptera) from the late Paleogene of Egypt: emended family diagnosis and biogeographic origins of Noctilionoidea The evolution of bat pollination: a phylogenetic perspective Bats that walk: a new evolutionary hypothesis for the terrestrial behaviour of New Zealand's endemic mystacinids A sphenodontine (Rhynchocephalia) from the Miocene of New Zealand and palaeobiogeography of the tuatara (Sphenodon)
Entorrhizomycota: A New Fungal Phylum Reveals New Perspectives on the Evolution of Fungi	scientific article	en:Entorrhizomycota: A New Fungal Phylum Reveals New Perspectives on the Evolution of Fungi	2015		26200112	4511587	10.1371/journal.pone.0128183	Loss of the flagellum happened only once in the fungal lineage: phylogenetic structure of kingdom Fungi inferred from RNA polymerase II subunit genes Ascospore formation in the yeast Saccharomyces cerevisiae Evolution of the angiosperms: calibrating the family tree
A New Eocene Casquehead Lizard (Reptilia, Corytophanidae) from North America	scientific article	en:A New Eocene Casquehead Lizard (Reptilia, Corytophanidae) from North America	2015		26131767	4489568	10.1371/journal.pone.0127900	Earliest example of a giant monitor lizard (Varanus, Varanidae, Squamata)
Lake Tanganyika--a 'melting pot' of ancient and young cichlid lineages (Teleostei: Cichlidae)?	scientific article	en:Lake Tanganyika--a 'melting pot' of ancient and young cichlid lineages (Teleostei: Cichlidae)?	2015		25928886	4415804	10.1371/journal.pone.0125043	Evolutionary History of Lake Tanganyika's Predatory Deepwater Cichlids Cryptic diversity of African tigerfish (genus Hydrocynus) reveals palaeogeographic signatures of linked neogene geotectonic events Time and origin of cichlid colonization of the lower Congo rapids The root of the East African cichlid radiations Evolution of feeding specialization in Tanganyikan scale-eating cichlids: a molecular phylogenetic approach Nuclear and mitochondrial data reveal different evolutionary processes in the Lake Tanganyika cichlid genus Tropheus Reticulate phylogeny of gastropod-shell-breeding cichlids from Lake Tanganyika--the result of repeated introgressive hybridization Out of Tanganyika: genesis, explosive speciation, key-innovations and phylogeography of the haplochromine cichlid fishes Q24804511 AFLP: a new technique for DNA fingerprinting
†Kenyaichthyidae fam. nov. and †Kenyaichthys gen. nov. - First Record of a Fossil Aplocheiloid Killifish (Teleostei, Cyprinodontiformes)	scientific article	en:†Kenyaichthyidae fam. nov. and †Kenyaichthys gen. nov. - First Record of a Fossil Aplocheiloid Killifish (Teleostei, Cyprinodontiformes)	2015		25923654	4414574	10.1371/journal.pone.0123056	The tree of life and a new classification of bony fishes
Role of Bmi-1 in regulation of ionizing irradiation-induced epithelial-mesenchymal transition and migration of breast cancer cells	scientific article	en:Role of Bmi-1 in regulation of ionizing irradiation-induced epithelial-mesenchymal transition and migration of breast cancer cells	2015	breast cancer	25734775	4348174	10.1371/journal.pone.0118799	The polycomb group gene Bmi1 regulates antioxidant defenses in neurons by repressing p53 pro-oxidant activity
Potential of selected Senegalese Aedes spp. mosquitoes (Diptera: Culicidae) to transmit Zika virus	scientific article	en:Potential of selected Senegalese Aedes spp. mosquitoes (Diptera: Culicidae) to transmit Zika virus	2015	Zika virus Zika fever	26527535	4629289	10.1186/s12879-015-1231-2	Zika virus. I. Isolations and serological specificity Yellow fever and Zika virus epizootics and enzootics in Uganda
State-of-the-Science: The Evolution of Occupational Exposure Limit Derivation and Application	scientific article	en:State-of-the-Science: The Evolution of Occupational Exposure Limit Derivation and Application	2015		26110740	4654637	10.1080/15459624.2015.1060329	Setting Occupational Exposure Limits for Chemical Allergens--Understanding the Challenges Considerations for Using Genetic and Epigenetic Information in Occupational Health Risk Assessment and Standard Setting Aggregate Exposure and Cumulative Risk Assessment--Integrating Occupational and Non-occupational Risk Factors Advances in Inhalation Dosimetry Models and Methods for Occupational Risk Assessment and Exposure Limit Derivation Exposure Estimation and Interpretation of Occupational Risk: Enhanced Information for the Occupational Risk Manager Historical Context and Recent Advances in Exposure-Response Estimation for Deriving Occupational Exposure Limits Systems Biology and Biomarkers of Early Effects for Occupational Exposure Limit Setting The Global Landscape of Occupational Exposure Limits--Implementation of Harmonization Principles to Guide Limit Selection The Scientific Basis of Uncertainty Factors Used in Setting Occupational Exposure Limits
Investigations into the Immunotoxicity and Allergic Potential Induced by Topical Application of N-Butylbenzenesulfonamide (NBBS) in a Murine Model	scientific article	en:Investigations into the Immunotoxicity and Allergic Potential Induced by Topical Application of N-Butylbenzenesulfonamide (NBBS) in a Murine Model	2015		26291892	4605868	10.1080/15287394.2015.1056898	Dermal Exposure to 3-Amino-5-mercapto-1,2,4-triazole (AMT) Induces Sensitization and Airway Hyperreactivity in BALB/c Mice
Evaluation of Diffuse Reflection Infrared Spectrometry for End-of-Shift Measurement of α-quartz in Coal Dust Samples	scientific article	en:Evaluation of Diffuse Reflection Infrared Spectrometry for End-of-Shift Measurement of α-quartz in Coal Dust Samples	2015		25636081	4681494	10.1080/15459624.2015.1011328	Evaluating portable infrared spectrometers for measuring the silica content of coal dust Quantitative Mid-Infrared Diffuse Reflection of Occupational Wood Dust Exposures Performance of high flow rate samplers for respirable particle collection Rapidly progressive coal workers' pneumoconiosis in the United States: geographic clustering and other factors
Sex-specific predictors of hearing-aid use in older persons: The age, gene/environment susceptibility - Reykjavik study	scientific article	en:Sex-specific predictors of hearing-aid use in older persons: The age, gene/environment susceptibility - Reykjavik study	2015		25816699	4536127	10.3109/14992027.2015.1024889	Hearing impairment associated with depression in US adults, National Health and Nutrition Examination Survey 2005-2010 Impairments in hearing and vision impact on mortality in older people: the AGES-Reykjavik Study
Health Status of Older US Workers and Nonworkers, National Health Interview Survey, 1997-2011	scientific article	en:Health Status of Older US Workers and Nonworkers, National Health Interview Survey, 1997-2011	2015		26402052	4584473	10.5888/pcd12.150040	Employment and occupation effects on depressive symptoms in older Americans: does working past age 65 protect against depression? Prevalence of multimorbidity among adults seen in family practice
A Pilot Assessment of Occupational Health Hazards in the US Electronic Scrap Recycling Industry	scientific article	en:A Pilot Assessment of Occupational Health Hazards in the US Electronic Scrap Recycling Industry	2015		25738822	4527159	10.1080/15459624.2015.1018516	A Pilot Assessment of Occupational Health Hazards in the US Electronic Scrap Recycling Industry Recommendations for medical management of adult lead exposure Adult lead exposure: time for change
Advances in Inhalation Dosimetry Models and Methods for Occupational Risk Assessment and Exposure Limit Derivation	scientific article	en:Advances in Inhalation Dosimetry Models and Methods for Occupational Risk Assessment and Exposure Limit Derivation	2015		26551218	4685615	10.1080/15459624.2015.1060328	Historical Context and Recent Advances in Exposure-Response Estimation for Deriving Occupational Exposure Limits Bayesian evaluation of a physiologically-based pharmacokinetic (PBPK) model of long-term kinetics of metal nanoparticles in rats Systems Biology and Biomarkers of Early Effects for Occupational Exposure Limit Setting State-of-the-Science: The Evolution of Occupational Exposure Limit Derivation and Application The Scientific Basis of Uncertainty Factors Used in Setting Occupational Exposure Limits Application of Markov chain Monte Carlo analysis to biomathematical modeling of respirable dust in US and UK coal miners Pulmonary fibrotic response to aspiration of multi-walled carbon nanotubes Concept of assessing nanoparticle hazards considering nanoparticle dosemetric and chemical/biological response metrics Inhalation dosimetry of diacetyl and butyric acid, two components of butter flavoring vapors Ultrafine particles cross cellular membranes by nonphagocytic mechanisms in lungs and in cultured cells Nanotoxicology: an emerging discipline evolving from studies of ultrafine particles Influence of exposure concentration or dose on the distribution of particulate material in rat and human lungs
Health seeking behaviours among electronic waste workers in Ghana	scientific article	en:Health seeking behaviours among electronic waste workers in Ghana	2015		26474859	4609051	10.1186/s12889-015-2376-z	Health status and access to health care of migrant workers in China
Moving pathogen genomics out of the lab and into the clinic: what will it take?	scientific article	en:Moving pathogen genomics out of the lab and into the clinic: what will it take?	2015		26719100	4697326	10.1186/s13073-015-0254-z	Real-time, portable genome sequencing for Ebola surveillance
ViennaNGS: A toolbox for building efficient next- generation sequencing analysis pipelines	scientific article	en:ViennaNGS: A toolbox for building efficient next- generation sequencing analysis pipelines	2015		26236465	4513691	10.12688/f1000research.6157.1	READemption-a tool for the computational analysis of deep-sequencing-based transcriptome data
Mathematical modeling of the West Africa Ebola epidemic	scientific article	en:Mathematical modeling of the West Africa Ebola epidemic	2015		26646185	4769159	10.7554/eLife.09186	Data sharing: Make outbreak research open access
Detection of Zika virus in urine	scientific article	en:Detection of Zika virus in urine	2015-01	Zika virus Zika fever	25530324	4285245	10.3201/eid2101.140894	Zika virus. I. Isolations and serological specificity
Comparison of musculoskeletal disorder health claims between construction floor layers and a general working population	scientific article	en:Comparison of musculoskeletal disorder health claims between construction floor layers and a general working population	2015-01		25224720	4270930	10.1136/oemed-2014-102313	A conceptual model of musculoskeletal disorders for occupational health practitioners Exploring physical exposures and identifying high-risk work tasks within the floor layer trade Occupational kneeling and radiographic tibiofemoral and patellofemoral osteoarthritis Incident and recurrent back injuries among union carpenters
Candidate gene-environment interaction research: reflections and recommendations	scientific article	en:Candidate gene-environment interaction research: reflections and recommendations	2015-01		25620996	4302784	10.1177/1745691614556682	Why most published research findings are false Why publishing everything is more effective than selective publishing of statistically significant results Identifying genetic variation for alcohol dependence Meta-analysis and imputation refines the association of 15q25 with smoking quantity Genome-wide association studies: a primer A genome-wide association study of anorexia nervosa
Global transcriptional start site mapping using differential RNA sequencing reveals novel antisense RNAs in Escherichia coli	scientific article	en:Global transcriptional start site mapping using differential RNA sequencing reveals novel antisense RNAs in Escherichia coli	2015-01-01		25266388	4288677	10.1128/JB.02096-14	READemption-a tool for the computational analysis of deep-sequencing-based transcriptome data
Gene expression profile of human lung epithelial cells chronically exposed to single-walled carbon nanotubes	scientific article	en:Gene expression profile of human lung epithelial cells chronically exposed to single-walled carbon nanotubes	2015-01-27	condensed matter physics	25852310	4314466	10.1186/s11671-014-0707-0	Promotion of lung adenocarcinoma following inhalation exposure to multi-walled carbon nanotubes Long-term effects of carbon containing engineered nanomaterials and asbestos in the lung: one year postexposure comparisons Chronic exposure to carbon nanotubes induces invasion of human mesothelial cells through matrix metalloproteinase-2 Neoplastic-like transformation effect of single-walled and multi-walled carbon nanotubes compared to asbestos on human lung small airway epithelial cells Systematic analysis of multiwalled carbon nanotube-induced cellular signaling and gene expression in human small airway epithelial cells Chronic occupational exposure to arsenic induces carcinogenic gene signaling networks and neoplastic transformation in human lung epithelial cells Reactive oxygen species-mediated p38 MAPK regulates carbon nanotube-induced fibrogenic and angiogenic responses Single-walled carbon nanotube-induced mitotic disruption Nanomaterials in humans: identification, characteristics, and potential damage Carbon nanotubes induce malignant transformation and tumorigenesis of human lung epithelial cells Multi-walled carbon nanotube-induced gene expression in the mouse lung: association with lung pathology Comparative proteomics and pulmonary toxicity of instilled single-walled carbon nanotubes, crocidolite asbestos, and ultrafine carbon black in mice Distribution and persistence of pleural penetrations by multi-walled carbon nanotubes Raw single-wall carbon nanotubes induce oxidative stress and activate MAPKs, AP-1, NF-kappaB, and Akt in normal and malignant human mesothelial cells Inhalation vs. aspiration of single-walled carbon nanotubes in C57BL/6 mice: inflammation, fibrosis, oxidative stress, and mutagenesis Hsp60 regulation of tumor cell apoptosis Alteration of deposition pattern and pulmonary response as a result of improved dispersion of aspirated single-walled carbon nanotubes in a mouse model
PubChemRDF: towards the semantic annotation of PubChem compound and substance databases	Article in the Journal of Cheminformatics.	en:PubChemRDF: towards the semantic annotation of PubChem compound and substance databases	2015-02		26175801	4500850	10.1186/s13321-015-0084-4	InChI - the worldwide chemical structure identifier standard The Semantic Automated Discovery and Integration (SADI) Web service Design-Pattern, API and Reference Implementation Linked open drug data for pharmaceutical research and development CiTO, the Citation Typing Ontology Chemical Entities of Biological Interest: an update The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration ChEBI: a database and ontology for chemical entities of biological interest
"The sum of all human knowledge": A systematic review of scholarly research on the content of Wikipedia		en:"The sum of all human knowledge": A systematic review of scholarly research on the content of Wikipedia	2015-02	Academic studies about Wikipedia Wikipedia			10.1002/asi.23172	Scientific citations in Wikipedia
Potential sexual transmission of Zika virus	scientific article	en:Potential sexual transmission of Zika virus	2015-02	Zika virus Zika fever	25625872	4313657	10.3201/eid2102.141363	Zika virus. I. Isolations and serological specificity
Co-infection with Zika and dengue viruses in 2 patients, New Caledonia, 2014	scientific article	en:Co-infection with Zika and dengue viruses in 2 patients, New Caledonia, 2014	2015-02	Zika virus Zika fever	25625687	4313662	10.3201/eid2102.141553	Zika virus. I. Isolations and serological specificity
Investing in prospective cohorts for etiologic study of occupational exposures	scientific article	en:Investing in prospective cohorts for etiologic study of occupational exposures	2015-02		25603935	4516175	10.1002/ajim.22403	Respiratory disease in United States farmers The Diesel Exhaust in Miners study: a nested case-control study of lung cancer and diesel exhaust The Diesel Exhaust in Miners study: a cohort mortality study with emphasis on lung cancer Occupational exposures among nurses and risk of spontaneous abortion Atrazine and cancer incidence among pesticide applicators in the agricultural health study (1994-2007) Rotenone, paraquat, and Parkinson's disease Research recommendations for selected IARC-classified agents Occupation as Socioeconomic Status or Environmental Exposure? A Survey of Practice Among Population-based Cardiovascular Studies in the United States Incident diabetes and pesticide exposure among licensed pesticide applicators: Agricultural Health Study, 1993-2003 Cancer incidence among glyphosate-exposed pesticide applicators in the Agricultural Health Study Listing occupational carcinogens Mortality in relation to smoking: 50 years' observations on male British doctors Cancer risk and parental pesticide application in children of Agricultural Health Study participants Lung cancer in heavy equipment operators and truck drivers with diesel exhaust exposure in the construction industry Priorities for development of research methods in occupational cancer
Acute inflammatory responses of nanoparticles in an intra-tracheal instillation rat model	scientific article	en:Acute inflammatory responses of nanoparticles in an intra-tracheal instillation rat model	2015-03-04		25738830	4349695	10.1371/journal.pone.0118778	Pulmonary cerium dioxide nanoparticle exposure differentially impairs coronary and mesenteric arteriolar reactivity Pulmonary and cardiovascular responses of rats to inhalation of a commercial antimicrobial spray containing titanium dioxide nanoparticles Nanoparticle inhalation alters systemic arteriolar vasoreactivity through sympathetic and cyclooxygenase-mediated pathways Nanomaterials in humans: identification, characteristics, and potential damage Nanotoxicology--A Pathologist's Perspective Nanoparticle inhalation impairs coronary microvascular reactivity via a local reactive oxygen species-dependent mechanism Pulmonary nanoparticle exposure disrupts systemic microvascular nitric oxide signaling Pulmonary Toxicity of Expancel® Microspheres in the Rat Systemic microvascular dysfunction and inflammation after pulmonary particulate matter exposure Nitric Oxide and Reactive Oxygen Species Production Causes Progressive Damage in Rats after Cessation of Silica Inhalation Particulate matter exposure impairs systemic microvascular endothelium-dependent dilation Enhancement of nitric oxide production by pulmonary cells following silica exposure
Setting our bibliographic references free: towards open citation data	scientific article	en:Setting our bibliographic references free: towards open citation data	2015-03-09	bibliography citation			10.1108/JD-12-2013-0166	Adventures in semantic publishing: exemplar semantic enhancements of a research article Liquid journals FaBiO and CiTO: Ontologies for describing bibliographic resources and citations How citation distortions create unfounded authority: analysis of a citation network Characterising Citations in Scholarly Documents: The CiTalO Framework Scholarly publishing and linked data
Modeling infectious disease dynamics in the complex landscape of global health	scientific article	en:Modeling infectious disease dynamics in the complex landscape of global health	2015-03-13		25766240	4445966	10.1126/science.aaa4339	Global rise in human infectious disease outbreaks
General population job exposure matrix applied to a pooled study of prevalent carpal tunnel syndrome	scientific article	en:General population job exposure matrix applied to a pooled study of prevalent carpal tunnel syndrome	2015-03-15		25700886	4425832	10.1093/aje/kwu286	Using Job-Title-Based Physical Exposures From O*NET in an Epidemiological Study of Carpal Tunnel Syndrome Personal and workplace psychosocial risk factors for carpal tunnel syndrome: a pooled study cohort: author response Pooling job physical exposure data from multiple independent studies in a consortium study of carpal tunnel syndrome Prevalence and incidence of carpal tunnel syndrome in US working populations: pooled analysis of six prospective studies Reliability of job-title based physical work exposures for the upper extremity: comparison to self-reported and observed exposure estimates Hospital injury rates in relation to socioeconomic status and working conditions Consensus criteria for the classification of carpal tunnel syndrome in epidemiologic studies Hand wrist cumulative trauma disorders in industry
Estimating the global burden of endemic canine rabies	scientific article	en:Estimating the global burden of endemic canine rabies	2015-04	infectious disease	25881058	4400070	10.1371/journal.pntd.0003709	Rabies situation in Cambodia Transmission dynamics of rabies virus in Thailand: implications for disease control
Zika virus infection, Philippines, 2012	scientific article	en:Zika virus infection, Philippines, 2012	2015-04	Zika virus Zika fever	25811410	4378478	10.3201/eid2104.141707	Zika virus. I. Isolations and serological specificity
Trends in worker hearing loss by industry sector, 1981-2010	scientific article	en:Trends in worker hearing loss by industry sector, 1981-2010	2015-04		25690583	4557728	10.1002/ajim.22429	Risk factors, health behaviors, and injury among adults employed in the transportation, warehousing, and utilities super sector Approaches for estimating prevalence ratios Occupational Illnesses within Two National Data Sets
Detection of circular permutations within protein structures using CE-CP	scientific article	en:Detection of circular permutations within protein structures using CE-CP	2015-04-15		25505094	4393524	10.1093/bioinformatics/btu823	BioJava: an open-source framework for bioinformatics in 2012 Circular permutation in proteins Pre-calculated protein structure alignments at the RCSB PDB website CPDB: a database of circular permutation in proteins CPSARST: an efficient circular permutation search tool applied to the detection of novel protein structural relationships Circularly permuted proteins in the protein structure database
MDSC and TGFβ Are Required for Facilitation of Tumor Growth in the Lungs of Mice Exposed to Carbon Nanotubes	scientific article	en:MDSC and TGFβ Are Required for Facilitation of Tumor Growth in the Lungs of Mice Exposed to Carbon Nanotubes	2015-04-15		25744719	4401633	10.1158/0008-5472.CAN-14-2376	Lung macrophages "digest" carbon nanotubes using a superoxide/peroxynitrite oxidative pathway Long-term effects of carbon containing engineered nanomaterials and asbestos in the lung: one year postexposure comparisons Biodegradation of single-walled carbon nanotubes by eosinophil peroxidase Carbon nanotubes enhance metastatic growth of lung carcinoma via up-regulation of myeloid-derived suppressor cells Lack of transforming growth factor-β signaling promotes collective cancer cell invasion through tumor-stromal crosstalk Single-walled carbon nanotube-induced mitotic disruption Carbon nanotubes induce malignant transformation and tumorigenesis of human lung epithelial cells Multi-walled carbon nanotube-induced gene expression in the mouse lung: association with lung pathology Comparative proteomics and pulmonary toxicity of instilled single-walled carbon nanotubes, crocidolite asbestos, and ultrafine carbon black in mice Case report: Lung disease in World Trade Center responders exposed to dust and smoke: carbon nanotubes found in the lungs of World Trade Center patients and dust samples Lung cancer in never smokers: clinical epidemiology and environmental risk factors Raw single-wall carbon nanotubes induce oxidative stress and activate MAPKs, AP-1, NF-kappaB, and Akt in normal and malignant human mesothelial cells Inhalation vs. aspiration of single-walled carbon nanotubes in C57BL/6 mice: inflammation, fibrosis, oxidative stress, and mutagenesis Alteration of deposition pattern and pulmonary response as a result of improved dispersion of aspirated single-walled carbon nanotubes in a mouse model Unusual inflammatory and fibrogenic pulmonary responses to single-walled carbon nanotubes in mice
Glutathione reaction products with a chemical allergen, methylene-diphenyl diisocyanate, stimulate alternative macrophage activation and eosinophilic airway inflammation	scientific article	en:Glutathione reaction products with a chemical allergen, methylene-diphenyl diisocyanate, stimulate alternative macrophage activation and eosinophilic airway inflammation	2015-04-20		25635619	4667722	10.1021/tx5005002	Connecting glutathione with immune responses to occupational methylene diphenyl diisocyanate exposure Hexamethylene diisocyanate (HDI) vapor reactivity with glutathione and subsequent transfer to human albumin Toluene diisocyanate reactivity with glutathione across a vapor/liquid interface and subsequent transcarbamoylation of human albumin Human innate immune responses to hexamethylene diisocyanate (HDI) and HDI-albumin conjugates Novel p19 protein engages IL-12p40 to form a cytokine, IL-23, with biological activities similar as well as distinct from IL-12
A higher level classification of all living organisms	scientific article	en:A Higher Level Classification of All Living Organisms	2015-04-29		25923521	4418965	10.1371/journal.pone.0119248	The revised classification of eukaryotes Biological nomenclature terms for facilitating communication in the naming of organisms Large-scale phylogenomic analyses reveal that two enigmatic protist lineages, telonemia and centroheliozoa, are related to photosynthetic chromalveolates Deep phylogeny, ancestral groups and the four ages of life Assessing the root of bilaterian animals with scalable phylogenomic methods To be or not to be a flatworm: the acoel controversy Lophotrochozoa internal phylogeny: new insights from an up-to-date analysis of nuclear ribosomal genes Evaluating support for the current classification of eukaryotic diversity Eukaryote Kingdoms: Seven or Nine? Phylogenetic structure of the prokaryotic domain: the primary kingdoms
Inferring horizontal gene transfer	scientific article	en:Inferring horizontal gene transfer	2015-05	inferring horizontal gene transfer	26020646	4462595	10.1371/journal.pcbi.1004095	Towards a better detection of horizontally transferred genes by combining unusual properties effectively Azospirillum genomes reveal transition of bacteria from aquatic to terrestrial environments The Significance of Pneumococcal Types Sequence space coverage, entropy of genomes and the potential to detect non-human DNA in human samples Resolving the structural features of genomic islands: a machine learning approach The power of phylogenetic approaches to detect horizontally transferred genes Use of artificial genomes in assessing methods for atypical gene detection Deduction of probable events of lateral gene transfer through comparison of phylogenetic trees by recursive consolidation and rearrangement A new computational method for the detection of horizontal gene transfer events Detection and characterization of horizontal transfers in prokaryotes using genomic signature Visualization of the phylogenetic content of five genomes using dekapentagonal maps From gene trees to organismal phylogeny in prokaryotes: the case of the gamma-Proteobacteria The source of laterally transferred genes in bacterial genomes Extensive mosaic structure revealed by the complete genome sequence of uropathogenic Escherichia coli Barriers to genetic exchange between bacterial species: Streptococcus pneumoniae transformation Molecular archaeology of the Escherichia coli genome
Healthy worker survivor bias in the Colorado Plateau uranium miners cohort	scientific article	en:Healthy worker survivor bias in the Colorado Plateau uranium miners cohort	2015-05-15		25837305	4506325	10.1093/aje/kwu348	Radon Exposure and Mortality Among White and American Indian Uranium Miners: An Update of the Colorado Plateau Cohort Radon in homes and risk of lung cancer: collaborative analysis of individual data from 13 European case-control studies Mortality among Navajo uranium miners Modifiers of exposure-response estimates for lung cancer among miners exposed to radon progeny
First report of autochthonous transmission of Zika virus in Brazil	scientific article	en:First report of autochthonous transmission of Zika virus in Brazil	2015-06	Zika virus Zika fever	26061233	4501423	10.1590/0074-02760150192	Zika virus. I. Isolations and serological specificity
Two-year follow-up of the Collision Auto Repair Safety Study (CARSS)	scientific article	en:Two-year follow-up of the Collision Auto Repair Safety Study (CARSS)	2015-06		25539646	4542724	10.1093/annhyg/meu109	An evaluation of a "best practices" musculoskeletal injury prevention program in nursing homes
Why Are Women Law Enforcement Officers More Burned-Out and What Might Help Them?	scientific article	en:Why Are Women Law Enforcement Officers More Burned-Out and What Might Help Them?	2015-06		26807428	4721598	10.4172/2329-6879.1000204	Shift work and vascular events: systematic review and meta-analysis
Potential Impact of Co-Infections and Co-Morbidities Prevalent in Africa on Influenza Severity and Frequency: A Systematic Review	scientific article	en:Potential Impact of Co-Infections and Co-Morbidities Prevalent in Africa on Influenza Severity and Frequency: A Systematic Review	2015-06-11		26068416	4466242	10.1371/journal.pone.0128580	Dengue virus infection in Africa Epidemiology and etiology of childhood pneumonia
Ebola Virus Epidemiology, Transmission, and Evolution during Seven Months in Sierra Leone	scientific article	en:Ebola Virus Epidemiology, Transmission, and Evolution during Seven Months in Sierra Leone	2015-06-18		26091036	4503805	10.1016/j.cell.2015.06.007	Data sharing: Make outbreak research open access
Sharing Research Data to Improve Public Health: A Funder Perspective	scientific article	en:Sharing Research Data to Improve Public Health: A Funder Perspective	2015-07	data sharing public health funding of science	26297752	4547198	10.1177/1556264615593485	Sharing health data: good intentions are not enough A systematic review of barriers to data sharing in public health Sharing research data to improve public health
Monitoring of Ebola Virus Makona Evolution through Establishment of Advanced Genomic Capability in Liberia	scientific article	en:Monitoring of Ebola Virus Makona Evolution through Establishment of Advanced Genomic Capability in Liberia	2015-07		26079255	4816332	10.3201/eid2107.150522	Data sharing: Make outbreak research open access
Best Practices for Ethical Sharing of Individual-Level Health Research Data From Low- and Middle-Income Settings	scientific article	en:Best Practices for Ethical Sharing of Individual-Level Health Research Data From Low- and Middle-Income Settings	2015-07		26297751	4547207	10.1177/1556264615594606	Data sharing: Make outbreak research open access
Effects of nitrogen-doped multi-walled carbon nanotubes compared to pristine multi-walled carbon nanotubes on human small airway epithelial cells	scientific article	en:Effects of nitrogen-doped multi-walled carbon nanotubes compared to pristine multi-walled carbon nanotubes on human small airway epithelial cells	2015-07-03		25797581	4714591	10.1016/j.tox.2015.03.008	Genotoxicity of multi-walled carbon nanotubes at occupationally relevant doses A new approach to design safe CNTs with an understanding of redox potential Multi-walled carbon nanotubes induce human microvascular endothelial cellular effects in an alveolar-capillary co-culture with small airway epithelial cells Distribution and fibrotic response following inhalation exposure to multi-walled carbon nanotubes System-based identification of toxicity pathways associated with multi-walled carbon nanotube-induced pathological responses Neoplastic-like transformation effect of single-walled and multi-walled carbon nanotubes compared to asbestos on human lung small airway epithelial cells Systematic analysis of multiwalled carbon nanotube-induced cellular signaling and gene expression in human small airway epithelial cells New perspectives for in vitro risk assessment of multiwalled carbon nanotubes: application of coculture and bioinformatics Acute pulmonary dose-responses to inhaled multi-walled carbon nanotubes Cell permeability, migration, and reactive oxygen species induced by multiwalled carbon nanotubes in human microvascular endothelial cells Pulmonary fibrotic response to aspiration of multi-walled carbon nanotubes Multi-walled carbon nanotube-induced gene expression in the mouse lung: association with lung pathology Distribution and persistence of pleural penetrations by multi-walled carbon nanotubes Perfluorooctane sulfonate (PFOS) induces reactive oxygen species (ROS) production in human microvascular endothelial cells: role in endothelial permeability Iron oxide nanoparticles induce human microvascular endothelial cell permeability through reactive oxygen species production and microtubule remodeling
Multiplexed paper analytical device for quantification of metals using distance-based detection	scientific article	en:Multiplexed paper analytical device for quantification of metals using distance-based detection	2015-07-07	bioengineering biomedical engineering	26009988	4470859	10.1039/c5lc00364d	Rapid detection of transition metals in welding fumes using paper-based analytical devices Determination of aerosol oxidative activity using silver nanoparticle aggregation on paper-based analytical devices A modified consumer inkjet for spatiotemporal control of gene expression
Regional and seasonal variation in airborne grass pollen levels between cities of Australia and New Zealand	scientific article	en:Regional and seasonal variation in airborne grass pollen levels between cities of Australia and New Zealand	2015-07-29	Plant Science	27069303	4826055	10.1007/s10453-015-9399-x	Differences in grass pollen allergen exposure across Australia The macroecology of airborne pollen in Australian and New Zealand urban areas
Detection of Zika Virus Infection in Thailand, 2012-2014	scientific article	en:Detection of Zika Virus Infection in Thailand, 2012-2014	2015-08	Zika virus Zika fever	26101272	4530765	10.4269/ajtmh.15-0022	Zika virus. I. Isolations and serological specificity
Law enforcement officers ' risk perceptions toward on-duty motor-vehicle events	scientific article	en:Law enforcement officers ' risk perceptions toward on-duty motor-vehicle events	2015-08-07		26380563	4570477	10.1108/PIJPSM-03-2015-0028	Homicides of law enforcement officers responding to domestic disturbance calls Economic burden of occupational injury and illness in the United States
Cherax snowden, a new species of crayfish (Crustacea, Decapoda, Parastacidae) from the Kepala Burung (Vogelkop) Peninsula in Irian Jaya (West Papua), Indonesia	scientific article	en:Cherax snowden, a new species of crayfish (Crustacea, Decapoda, Parastacidae) from the Kepala Burung (Vogelkop) Peninsula in Irian Jaya (West Papua), Indonesia	2015-08-24		26448698	4591594	10.3897/zookeys.518.6127	Cherax (Astaconephrops) pulcher, a new species of freshwater crayfish (Crustacea, Decapoda, Parastacidae) from the Kepala Burung (Vogelkop) Peninsula, Irian Jaya (West Papua), Indonesia
Biology of Zika Virus Infection in Human Skin Cells	scientific article	en:Biology of Zika Virus Infection in Human Skin Cells	2015-09 2015-06-17	Zika virus Zika fever	26085147	4524089	10.1128/JVI.00354-15	Zika virus. I. Isolations and serological specificity
Occupational exposures and lung cancer risk among Minnesota taconite mining workers	scientific article	en:Occupational exposures and lung cancer risk among Minnesota taconite mining workers	2015-09		25977445	4537827	10.1136/oemed-2015-102825	Mortality experience among Minnesota taconite mining industry workers Quantitative relationship between silica exposure and lung cancer mortality in German uranium miners, 1946-2003
Why infectious disease research needs community ecology	scientific article	en:Why infectious disease research needs community ecology	2015-09-04		26339035	4863701	10.1126/science.1259504	Global rise in human infectious disease outbreaks
Radio Galaxy Zoo: host galaxies and radio morphologies derived from visual inspection	scientific article	en:Radio Galaxy Zoo: host galaxies and radio morphologies derived from visual inspection	2015-09-06	Astronomy and Astrophysics Radio Galaxy Zoo			10.1093/mnras/stv1688	Galaxy Zoo: morphologies derived from visual inspection of galaxies from the Sloan Digital Sky Survey
Homo naledi, a new species of the genus Homo from the Dinaledi Chamber, South Africa	scientific article	en:Homo naledi, a new species of the genus Homo from the Dinaledi Chamber, South Africa	2015-09-10	Homo naledi	26354291	4559886	10.7554/eLife.09560	A juvenile early hominin skeleton from Dikika, Ethiopia Geological and taphonomic context for the new hominin species Homo naledi from the Dinaledi Chamber, South Africa Early Pleistocene third metacarpal from Kenya and the evolution of modern human-like hand morphology First partial skeleton of a 1.34-million-year-old Paranthropus boisei from Bed II, Olduvai Gorge, Tanzania
Socioeconomic Disparities and Air Pollution Exposure: a Global Review	scientific article	en:Socioeconomic Disparities and Air Pollution Exposure: a Global Review	2015-09-18		26381684	4626327	10.1007/s40572-015-0069-5	Early life exposure to air pollution: how bad is it? Health, wealth, and air pollution: advancing theory and methods Mapping environmental injustices: pitfalls and potential of geographic information systems in assessing environmental health and equity
Ten Simple Rules for Creating a Good Data Management Plan	scientific article	en:Ten Simple Rules for Creating a Good Data Management Plan	2015-10	Data management plan	26492633	4619636	10.1371/journal.pcbi.1004525	Ten simple rules for getting grants Ten simple rules for writing research papers Ten simple rules for making good oral presentations Ten simple rules for the care and feeding of scientific data The data paper: a mechanism to incentivize data publishing in biodiversity science The transformative nature of transparency in research funding
Zika Virus Outbreak, Bahia, Brazil	scientific article	en:Zika Virus Outbreak, Bahia, Brazil	2015-10	Zika virus Zika fever	26401719	4593454	10.3201/eid2110.150847	Zika virus. I. Isolations and serological specificity Zika Virus Outbreak on Yap Island, Federated States of Micronesia Zika Virus, French Polynesia, South Pacific, 2013 Co-infection with Zika and dengue viruses in 2 patients, New Caledonia, 2014 Rapid detection and typing of dengue viruses from clinical samples by using reverse transcriptase-polymerase chain reaction Molecular diagnosis and analysis of Chikungunya virus Characterization of West Nile virus (WNV) isolates from Assam, India: insights into the circulating WNV in northeastern India Mayaro fever in the city of Manaus, Brazil, 2007-2008 One-step RT-PCR for detection of Zika virus Complete Coding Sequence of Zika Virus from a French Polynesia Outbreak in 2013
Impact of recent innovations in the use of mass cytometry in support of drug development	scientific article	en:Impact of recent innovations in the use of mass cytometry in support of drug development	2015-10	drug discovery	26092491	4668584	10.1016/j.drudis.2015.06.001	Single-cell mass cytometry of differential immune and drug responses across a human hematopoietic continuum
Ultrafine and respirable particle exposure during vehicle fire suppression	scientific article	en:Ultrafine and respirable particle exposure during vehicle fire suppression	2015-10		26308547	4606867	10.1039/c5em00233h	Mortality and cancer incidence in a pooled cohort of US firefighters from San Francisco, Chicago and Philadelphia (1950-2009) Aerosol monitoring during carbon nanofiber production: mobile direct-reading sampling Ultrafine and Respirable Particles in an Automotive Grey Iron Foundry Emergency Duties and Deaths from Heart Disease among Firefighters in the United States Q24806452 Firefighters and on-duty deaths from coronary heart disease: a case control study
Identification of TGF-β receptor-1 as a key regulator of carbon nanotube-induced fibrogenesis	scientific article	en:Identification of TGF-β receptor-1 as a key regulator of carbon nanotube-induced fibrogenesis	2015-10-15	cell biology	26472812	4609943	10.1152/ajplung.00002.2015	Distribution and fibrotic response following inhalation exposure to multi-walled carbon nanotubes Occupational nanosafety considerations for carbon nanotubes and carbon nanofibers Factoring-in agglomeration of carbon nanotubes and nanofibers for better prediction of their toxicity versus asbestos Pulmonary fibrotic response to aspiration of multi-walled carbon nanotubes Quantitative techniques for assessing and controlling the dispersion and biological effects of multiwalled carbon nanotubes in mammalian tissue culture cells Dispersion of single-walled carbon nanotubes by a natural lung surfactant for pulmonary in vitro and in vivo toxicity studies Distribution and persistence of pleural penetrations by multi-walled carbon nanotubes Alteration of deposition pattern and pulmonary response as a result of improved dispersion of aspirated single-walled carbon nanotubes in a mouse model Unusual inflammatory and fibrogenic pulmonary responses to single-walled carbon nanotubes in mice SB-431542 is a potent and specific inhibitor of transforming growth factor-beta superfamily type I activin receptor-like kinase (ALK) receptors ALK4, ALK5, and ALK7
Risk of cancer from occupational exposure to ionising radiation: retrospective cohort study of workers in France, the United Kingdom, and the United States (INWORKS)	scientific article	en:Risk of cancer from occupational exposure to ionising radiation: retrospective cohort study of workers in France, the United Kingdom, and the United States (INWORKS)	2015-10-20		26487649	4612459	10.1136/bmj.h5359	Ionising radiation and risk of death from leukaemia and lymphoma in radiation-monitored workers (INWORKS): an international cohort study Cohort Profile: The International Nuclear Workers Study (INWORKS) Assessment and indirect adjustment for confounding by smoking in cohort studies using relative hazards models Cancer risk in 680,000 people exposed to computed tomography scans in childhood or adolescence: data linkage study of 11 million Australians Radiation exposure from CT scans in childhood and subsequent risk of leukaemia and brain tumours: a retrospective cohort study Mortality and cancer incidence following occupational radiation exposure: third analysis of the National Registry for Radiation Workers Risk of cancer after low doses of ionising radiation: retrospective cohort study in 15 countries
Styrene-associated health outcomes at a windblade manufacturing plant	scientific article	en:Styrene-associated health outcomes at a windblade manufacturing plant	2015-11		26305283	4618383	10.1002/ajim.22516	Prevalence of Airflow Obstruction in U.S. Adults Aged 40–79 Years: NHANES Data 1988–1994 and 2007–2010 Obliterative bronchiolitis in fibreglass workers: a new occupational disease? Exhaled Nitric Oxide Measurement in Workers in a Microwave Popcorn Production Plant Exposure to styrene and chronic health effects: mortality and incidence of solid cancers in the Danish reinforced plastics industry
Isocyanates and work-related asthma: Findings from California, Massachusetts, Michigan, and New Jersey, 1993-2008	scientific article	en:Isocyanates and work-related asthma: Findings from California, Massachusetts, Michigan, and New Jersey, 1993-2008	2015-11		26351141	4697263	10.1002/ajim.22527	Prevention guidance for isocyanate-induced asthma using occupational surveillance data The management of work-related asthma guidelines: a broader perspective Primary prevention: exposure reduction, skin exposure and respiratory protection Airborne isocyanate exposures in the collision repair industry and a comparison to occupational exposure limits Skin exposure to aliphatic polyisocyanates in the auto body repair and refinishing industry: III. A personal exposure algorithm Skin exposure to isocyanates: reasons for concern Surveillance for isocyanate asthma: a model based cost effectiveness analysis Exposure and Immunological Determinants in a Murine Model for Toluene Diisocyanate (TDI) Asthma A longitudinal study of adult-onset asthma incidence among HMO members An Evaluation of the Incidence of Work-related Asthma in the United States
Profusion of Opacities in Simple Coal Worker's Pneumoconiosis Is Associated With Reduced Lung Function	scientific article	en:Profusion of Opacities in Simple Coal Worker's Pneumoconiosis Is Associated With Reduced Lung Function	2015-11		25996896	4631041	10.1378/chest.15-0118	Small mine size is associated with lung function abnormality and pneumoconiosis among underground coal miners in Kentucky, Virginia and West Virginia Coal workers' pneumoconiosis and progressive massive fibrosis are increasingly more prevalent among workers in small underground coal mines in the United States Longitudinal and cross sectional analyses of exposure to coal mine dust and pulmonary function in new miners Exposure to respirable coalmine dust and incidence of progressive massive fibrosis
Outbreak Breakthrough: Using Whole-Genome Sequencing to Control Hospital Infection	scientific article	en:Outbreak Breakthrough: Using Whole-Genome Sequencing to Control Hospital Infection	2015-11		26523889	4629729	10.1289/ehp.123-A281	Real-time, portable genome sequencing for Ebola surveillance
Zika virus and the never-ending story of emerging pathogens and Transfusion Medicine	scientific article	en:Zika virus and the never-ending story of emerging pathogens and Transfusion Medicine	2015-11-05	Zika virus	26674815	4786129	10.2450/2015.0066-15	Zika virus. I. Isolations and serological specificity
Diacetyl and 2,3-pentanedione exposure of human cultured airway epithelial cells: Ion transport effects and metabolism of butter flavoring agents	scientific article	en:Diacetyl and 2,3-pentanedione exposure of human cultured airway epithelial cells: Ion transport effects and metabolism of butter flavoring agents	2015-12-15		26454031	4739639	10.1016/j.taap.2015.10.004	Popcorn flavoring effects on reactivity of rat airways in vivo and in vitro Inhalation dosimetry of diacetyl and butyric acid, two components of butter flavoring vapors Respiratory Toxicologic Pathology of Inhaled Diacetyl in Sprague-Dawley Rats Bronchiolitis obliterans syndrome in popcorn production plant workers Hyperosmolar Solution Effects in Guinea Pig Airways. II. Epithelial Bioelectric Responses to Relative Changes in Osmolarity Clinical Bronchiolitis Obliterans in Workers at a Microwave-Popcorn Plant Molecular characterization of mammalian dicarbonyl/L-xylulose reductase and its localization in kidney
Virus evolution and transmission in an ever more connected world	scientific article	en:Virus evolution and transmission in an ever more connected world	2015-12-22		26702033	4707738	10.1098/rspb.2014.2878	Global rise in human infectious disease outbreaks Data sharing: Make outbreak research open access
Integrated Analysis of Dysregulated ncRNA and mRNA Expression Profiles in Humans Exposed to Carbon Nanotubes	scientific article	en:Integrated Analysis of Dysregulated ncRNA and mRNA Expression Profiles in Humans Exposed to Carbon Nanotubes	2016		26930275	4773015	10.1371/journal.pone.0150628	mRNAs and miRNAs in whole blood associated with lung hyperplasia, fibrosis, and bronchiolo-alveolar adenoma and adenocarcinoma after multi-walled carbon nanotube inhalation exposure in mice Gene expression profile of human lung epithelial cells chronically exposed to single-walled carbon nanotubes Carbon Nanotube and Nanofiber Exposure Assessments: An Analysis of 14 Site Visits MDSC and TGFβ Are Required for Facilitation of Tumor Growth in the Lungs of Mice Exposed to Carbon Nanotubes Promotion of lung adenocarcinoma following inhalation exposure to multi-walled carbon nanotubes System-based identification of toxicity pathways associated with multi-walled carbon nanotube-induced pathological responses Neoplastic-like transformation effect of single-walled and multi-walled carbon nanotubes compared to asbestos on human lung small airway epithelial cells Carbon nanotubes enhance metastatic growth of lung carcinoma via up-regulation of myeloid-derived suppressor cells The GENCODE pseudogene resource Acute pulmonary dose-responses to inhaled multi-walled carbon nanotubes Single-walled carbon nanotube-induced mitotic disruption Pulmonary fibrotic response to aspiration of multi-walled carbon nanotubes Carbon nanotubes induce malignant transformation and tumorigenesis of human lung epithelial cells Comparative proteomics and pulmonary toxicity of instilled single-walled carbon nanotubes, crocidolite asbestos, and ultrafine carbon black in mice starBase: a database for exploring microRNA-mRNA interaction maps from Argonaute CLIP-Seq and Degradome-Seq data The UCSC Genome Browser database: update 2011 Distribution and persistence of pleural penetrations by multi-walled carbon nanotubes Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression miRecords: an integrated resource for microRNA-target interactions Induced ncRNAs allosterically modify RNA-binding proteins in cis to inhibit transcription Epigenetic silencing of tumour suppressor gene p15 by its antisense RNA Alteration of deposition pattern and pulmonary response as a result of improved dispersion of aspirated single-walled carbon nanotubes in a mouse model Functional demarcation of active and silent chromatin domains in human HOX loci by noncoding RNAs DAVID Bioinformatics Resources: expanded annotation database and novel algorithms to better extract biology from large gene lists Cardiovascular effects of pulmonary exposure to single-wall carbon nanotubes Nanoparticles: health effects--pros and cons GENCODE: producing a reference annotation for ENCODE Potential role of ultrafine particles in associations between airborne particle mass and cardiovascular health Serum biomarkers in interstitial lung diseases Unusual inflammatory and fibrogenic pulmonary responses to single-walled carbon nanotubes in mice Human microRNA genes are frequently located at fragile sites and genomic regions involved in cancers
Replacement of filters for respirable quartz measurement in coal mine dust by infrared spectroscopy	scientific article	en:Replacement of filters for respirable quartz measurement in coal mine dust by infrared spectroscopy	2016		26375614	4706796	10.1080/15459624.2015.1091962	Quartz in coal dust deposited on internal surface of respirable size selective samplers Quartz measurement in coal dust with high-flow rate samplers: laboratory study
On the Seasonal Occurrence and Abundance of the Zika Virus Vector Mosquito Aedes Aegypti in the Contiguous United States	scientific article	en:On the Seasonal Occurrence and Abundance of the Zika Virus Vector Mosquito Aedes Aegypti in the Contiguous United States	2016	Aedes aegypti Zika virus	27066299	4807952	10.1371/currents.outbreaks.50dfc7f46798675fc63e7d7da563da76	Zika virus. I. Isolations and serological specificity
Estimating risks of importation and local transmission of Zika virus infection	scientific article	en:Estimating risks of importation and local transmission of Zika virus infection	2016	Zika virus Zika virus outbreak in Latin America	27069825	4824915	10.7717/peerj.1904	Zika virus. II. Pathogenicity and physical properties
Genome-wide transcription start site mapping of Bradyrhizobium japonicum grown free-living or in symbiosis - a rich resource to identify new transcripts, proteins and to study gene regulation	scientific article	en:Genome-wide transcription start site mapping of Bradyrhizobium japonicum grown free-living or in symbiosis - a rich resource to identify new transcripts, proteins and to study gene regulation	2016		27107716	4842269	10.1186/s12864-016-2602-9	READemption-a tool for the computational analysis of deep-sequencing-based transcriptome data
Zika Virus: the Latest Newcomer	scientific article	en:Zika Virus: the Latest Newcomer	2016	Zika virus	27148186	4835484	10.3389/fmicb.2016.00496	Zika virus. I. Isolations and serological specificity Zika virus. II. Pathogenicity and physical properties Yellow fever and Zika virus epizootics and enzootics in Uganda
INTRODUCTION AND TRANSMISSION OF ZIKA VIRUS IN BRAZIL: NEW CHALLENGES FOR THE AMERICAS	scientific article	en:INTRODUCTION AND TRANSMISSION OF ZIKA VIRUS IN BRAZIL: NEW CHALLENGES FOR THE AMERICAS	2016	Zika virus	27007567	4804561	10.1590/s1678-9946201658024	Zika virus. I. Isolations and serological specificity Zika virus. II. Pathogenicity and physical properties
Overview of Zika virus (ZIKV) infection in regards to the Brazilian epidemic		en:Overview of Zika virus (ZIKV) infection in regards to the Brazilian epidemic	2016	Zika virus			10.1590/1414-431x20165420	Zika virus. I. Isolations and serological specificity
Causal or not: applying the Bradford Hill aspects of evidence to the association between Zika virus and microcephaly	scientific article	en:Causal or not: applying the Bradford Hill aspects of evidence to the association between Zika virus and microcephaly	2016	Zika virus	26976611	4818755	10.15252/emmm.201506058	Zika virus. I. Isolations and serological specificity
The global spread of Zika virus: is public and media concern justified in regions currently unaffected?	scientific article	en:The global spread of Zika virus: is public and media concern justified in regions currently unaffected?	2016	Zika virus	27093860	4837632	10.1186/s40249-016-0132-y	Zika virus. I. Isolations and serological specificity
The expanding spectrum of modes of transmission of Zika virus: a global concern	scientific article	en:The expanding spectrum of modes of transmission of Zika virus: a global concern	2016	Zika virus	26939897	4776405	10.1186/s12941-016-0128-2	Zika virus. I. Isolations and serological specificity Zika virus. II. Pathogenicity and physical properties
Clinical features and neuroimaging (CT and MRI) findings in presumed Zika virus related congenital infection and microcephaly: retrospective case series study	scientific article	en:Clinical features and neuroimaging (CT and MRI) findings in presumed Zika virus related congenital infection and microcephaly: retrospective case series study	2016	Zika virus	27075009	4830901	10.1136/bmj.i1901	Zika virus. I. Isolations and serological specificity
Aedes mosquitoes and Zika virus infection: an A to Z of emergence?	scientific article	en:Aedes mosquitoes and Zika virus infection: an A to Z of emergence?	2016	Zika virus	26905027	4777928	10.1038/emi.2016.37	Zika virus. I. Isolations and serological specificity
Zika virus infections imported from Brazil to Portugal, 2015	scientific article	en:Zika virus infections imported from Brazil to Portugal, 2015	2016	Zika virus	27134823	4833829	10.1016/j.idcr.2016.03.004	Zika virus. I. Isolations and serological specificity
Using mobile sequencers in an academic classroom	scientific article	en:Using mobile sequencers in an academic classroom	2016		27054412	4869913	10.7554/eLife.14258	Real-time, portable genome sequencing for Ebola surveillance
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A Quick Introduction to Version Control with Git and GitHub	scientific article	en:A Quick Introduction to Version Control with Git and GitHub	2016-01		26785377	4718703	10.1371/journal.pcbi.1004668	Git can facilitate greater reproducibility and increased transparency in science Best practices for scientific computing An integrated encyclopedia of DNA elements in the human genome Practical guidelines for the comprehensive analysis of ChIP-seq data A quick guide to software licensing for the scientist-programmer A quick guide to organizing computational biology projects
Zika virus and its implication in transfusion safety	scientific article	en:Zika virus and its implication in transfusion safety	2016-01	Zika virus Zika fever blood transfusion	26969782	4786766	10.1016/j.bjhh.2016.01.002	Zika virus. I. Isolations and serological specificity
Developing Global Norms for Sharing Data and Results during Public Health Emergencies	scientific article	en:Developing Global Norms for Sharing Data and Results during Public Health Emergencies	2016-01	data sharing	26731342	4701443	10.1371/journal.pmed.1001935	Data sharing: Make outbreak research open access
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RNA-seq – Revealing Biological Insights in Bacteria	scientific article	en:RNA-seq – Revealing Biological Insights in Bacteria	2016-01-14				10.5772/61669	READemption-a tool for the computational analysis of deep-sequencing-based transcriptome data
Dual RNA-seq unveils noncoding RNA functions in host–pathogen interactions	scientific article	en:Dual RNA-seq unveils noncoding RNA functions in host–pathogen interactions	2016-01-20				10.1038/nature16547	READemption-a tool for the computational analysis of deep-sequencing-based transcriptome data
Supervisor Support Buffers Daily Psychological and Physiological Reactivity to Work-to-Family Conflict	scientific article	en:Supervisor Support Buffers Daily Psychological and Physiological Reactivity to Work-to-Family Conflict	2016-02-01		26778857	4712734	10.1111/jomf.12252	Development and Validation of a Multidimensional Measure of Family Supportive Supervisor Behaviors (FSSB) Clarifying work-family intervention processes: the roles of work-family conflict and family-supportive supervisor behaviors
Open drug discovery for the Zika virus	scientific article	en:Open drug discovery for the Zika virus	2016-02-09	Zika virus Zika fever drug discovery Open research bioinformatics	27134728	4841202	10.12688/f1000research.8013.1	Zika virus. I. Isolations and serological specificity
Big data or bust: realizing the microbial genomics revolution	scientific article	en:Big data or bust: realizing the microbial genomics revolution	2016-02-09				10.1099/mgen.0.000046	Real-time, portable genome sequencing for Ebola surveillance
Zika Virus Associated with Microcephaly	2016 scientific article	en:Zika Virus Associated with Microcephaly	2016-02-10 2016-03-10	Zika virus Zika fever microcephaly	26862926		10.1056/NEJMoa1600651	Quantitative real-time PCR detection of Zika virus and evaluation with field-caught mosquitoes One-step RT-PCR for detection of Zika virus Zika virus intrauterine infection causes fetal brain abnormality and microcephaly: tip of the iceberg? Potential sexual transmission of Zika virus Zika virus. I. Isolations and serological specificity Zika virus outside Africa Zika Virus Outbreak on Yap Island, Federated States of Micronesia Current Zika virus epidemiology and recent epidemics
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Zika Virus: Diagnostics for an Emerging Pandemic Threat	scientific article	en:Zika Virus: Diagnostics for an Emerging Pandemic Threat	2016-02-17	Zika virus			10.1128/jcm.00279-16	Zika virus. I. Isolations and serological specificity
Zika virus infection during pregnancy: what, where, and why?	scientific article	en:Zika virus infection during pregnancy: what, where, and why?	2016-02-25	Zika virus			10.3399/bjgp16x683917	Zika virus. I. Isolations and serological specificity
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Expression Analysis Highlights AXL as a Candidate Zika Virus Entry Receptor in Neural Stem Cells	scientific article	en:Expression Analysis Highlights AXL as a Candidate Zika Virus Entry Receptor in Neural Stem Cells	2016-03	cell biology Zika virus Zika fever AXL neural stem cell	27038591	4860115	10.1016/j.stem.2016.03.012	Zika virus. I. Isolations and serological specificity Zika virus. II. Pathogenicity and physical properties
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DSM-IV post-traumatic stress disorder among World Trade Center responders 11-13 years after the disaster of 11 September 2001 (9/11)	scientific article	en:DSM-IV post-traumatic stress disorder among World Trade Center responders 11-13 years after the disaster of 11 September 2001 (9/11)	2016-03		26603700	4754831	10.1017/S0033291715002184	World Trade Center-related physical and mental health burden among New York City Fire Department emergency medical service workers World Trade Center disaster exposure-related probable posttraumatic stress disorder among responders and civilians: a meta-analysis Exposure, probable PTSD and lower respiratory illness among World Trade Center rescue, recovery and clean-up workers Physician-diagnosed respiratory conditions and mental health symptoms 7-9 years following the World Trade Center disaster Enduring mental health morbidity and social function impairment in world trade center rescue, recovery, and cleanup workers: the psychological dimension of an environmental health disaster War-related posttraumatic stress disorder in Black, Hispanic, and majority White Vietnam veterans: the roles of exposure and vulnerability
Differential Susceptibilities of Aedes aegypti and Aedes albopictus from the Americas to Zika Virus	scientific article	en:Differential Susceptibilities of Aedes aegypti and Aedes albopictus from the Americas to Zika Virus	2016-03	Zika virus Aedes aegypti Asian tiger mosquito	26938868	4777396	10.1371/journal.pntd.0004543	Zika virus. II. Pathogenicity and physical properties Yellow fever and Zika virus epizootics and enzootics in Uganda
Zika Virus: Medical Countermeasure Development Challenges	scientific article	en:Zika Virus: Medical Countermeasure Development Challenges	2016-03	Zika virus	26934531	4774925	10.1371/journal.pntd.0004530	Zika virus. I. Isolations and serological specificity Zika virus. II. Pathogenicity and physical properties Yellow fever and Zika virus epizootics and enzootics in Uganda
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Zika virus outbreak: 'a perfect storm'	scientific article	en:Zika virus outbreak: ‘a perfect storm’	2016-03-09	Zika virus outbreak in Latin America Zika virus	26956448	4820676	10.1038/emi.2016.42	Zika virus. I. Isolations and serological specificity
Zika Virus: New Clinical Syndromes and Its Emergence in the Western Hemisphere	scientific article	en:Zika Virus: New Clinical Syndromes and Its Emergence in the Western Hemisphere	2016-03-09 2016-05-15	Zika virus	26962217	4859708	10.1128/jvi.00252-16	Zika virus. I. Isolations and serological specificity Zika virus. II. Pathogenicity and physical properties Yellow fever and Zika virus epizootics and enzootics in Uganda
Infectious Zika viral particles in breastmilk	2016 scientific article	en:Infectious Zika viral particles in breastmilk	2016-03-12	Zika virus human breast milk Zika fever	26944028		10.1016/s0140-6736(16)00624-3	Genetic and serologic properties of Zika virus associated with an epidemic, Yap State, Micronesia, 2007
Comparative genomic analysis of pre-epidemic and epidemic Zika virus strains for virological factors potentially associated with the rapidly expanding epidemic	scientific article	en:Comparative genomic analysis of pre-epidemic and epidemic Zika virus strains for virological factors potentially associated with the rapidly expanding epidemic	2016-03-16	Zika virus Zika virus genome Zika virus outbreak in Latin America 2007 Yap Islands Zika virus outbreak 2013–2014 Zika virus outbreaks in Oceania	26980239	4820678	10.1038/emi.2016.48	Zika virus. I. Isolations and serological specificity
Intensive aquaculture selects for increased virulence and interference competition in bacteria	scientific article	en:Intensive aquaculture selects for increased virulence and interference competition in bacteria	2016-03-16		26936249	4810868	10.1098/rspb.2015.3069	Global rise in human infectious disease outbreaks
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The 3.8 Å resolution cryo-EM structure of Zika virus	scientific article	en:The 3.8 A resolution cryo-EM structure of Zika virus	2016-03-31	Zika virus Cryo-electron microscopy	27033547	4845755	10.1126/science.aaf5316	Zika virus. I. Isolations and serological specificity
Characterization of Lethal Zika Virus Infection in AG129 Mice	scientific article	en:Characterization of Lethal Zika Virus Infection in AG129 Mice	2016-04	AG129 Mice Zika virus Zika fever	27093158	4836712	10.1371/journal.pntd.0004682	Zika virus. I. Isolations and serological specificity Zika virus. II. Pathogenicity and physical properties Yellow fever and Zika virus epizootics and enzootics in Uganda
Zika Virus Outbreak in Rio de Janeiro, Brazil: Clinical Characterization, Epidemiological and Virological Aspects	scientific article	en:Zika Virus Outbreak in Rio de Janeiro, Brazil: Clinical Characterization, Epidemiological and Virological Aspects	2016-04	Zika virus Zika virus outbreak in Latin America	27070912	4829157	10.1371/journal.pntd.0004636	Detection of four dengue serotypes suggests rise in hyperendemicity in urban centers of Brazil Epidemiological Scenario of Dengue in Brazil Aedes aegypti Control Strategies in Brazil: Incorporation of New Technologies to Overcome the Persistence of Dengue Epidemics Aedes aegypti entomological indices in an endemic area for dengue in Sao Paulo State, Brazil Seasonal dynamics of Aedes aegypti (Diptera: Culicidae) in the northernmost state of Brazil: a likely port-of-entry for dengue virus 4 Outbreak of Exanthematous Illness Associated with Zika, Chikungunya, and Dengue Viruses, Salvador, Brazil Emergence and potential for spread of Chikungunya virus in Brazil Zika virus infection complicated by Guillain-Barre syndrome--case report, French Polynesia, December 2013 Chikungunya, an epidemic arbovirosis Zika Virus Infection in Man Rapid spread of emerging Zika virus in the Pacific area Current Zika virus epidemiology and recent epidemics Zika Virus Outbreak on Yap Island, Federated States of Micronesia Zika Virus Outbreak, Bahia, Brazil First detection of autochthonous Zika virus transmission in a HIV-infected patient in Rio de Janeiro, Brazil First report of autochthonous transmission of Zika virus in Brazil Zika Virus: A New Chapter in the History of Medicine Ocular Findings in Infants With Microcephaly Associated With Presumed Zika Virus Congenital Infection in Salvador, Brazil Zika Virus Infection in Pregnant Women in Rio de Janeiro — Preliminary Report Genetic and serologic properties of Zika virus associated with an epidemic, Yap State, Micronesia, 2007 Rapid detection and typing of dengue viruses from clinical samples by using reverse transcriptase-polymerase chain reaction An outbreak of dengue virus at Rio de Janeiro--1986 Potential sexual transmission of Zika virus Probable non-vector-borne transmission of Zika virus, Colorado, USA Detection of Zika virus in urine Detection of Zika virus in saliva Zika Virus Transmission from French Polynesia to Brazil Anticipating the international spread of Zika virus from Brazil
The Epidemic of Zika Virus–Related Microcephaly in Brazil: Detection, Control, Etiology, and Future Scenarios	scientific article	en:The Epidemic of Zika Virus–Related Microcephaly in Brazil: Detection, Control, Etiology, and Future Scenarios	2016-04	Zika virus			10.2105/ajph.2016.303113	Zika virus. I. Isolations and serological specificity
History, Epidemiology, and Clinical Manifestations of Zika: A Systematic Review	scientific article	en:History, Epidemiology, and Clinical Manifestations of Zika: A Systematic Review	2016-04	Zika virus			10.2105/ajph.2016.303112	Zika virus. I. Isolations and serological specificity
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Spread of the Invasive Mosquitoes Aedes aegypti and Aedes albopictus in the Black Sea Region Increases Risk of Chikungunya, Dengue, and Zika Outbreaks in Europe	scientific article	en:Spread of the Invasive Mosquitoes Aedes aegypti and Aedes albopictus in the Black Sea Region Increases Risk of Chikungunya, Dengue, and Zika Outbreaks in Europe	2016-04	Zika virus Aedes aegypti Asian tiger mosquito	27115737	4846050	10.1371/journal.pntd.0004664	Dengue and dengue vectors in the WHO European region: past, present, and scenarios for the future Autochthonous dengue emphasises the threat of arbovirosis in Europe Detection of Aedes aegypti, Aedes albopictus , and Aedes koreicus in the Area of Sochi, Russia Local and regional spread of chikungunya fever in the Americas Concurrent outbreaks of dengue, chikungunya and Zika virus infections - an unprecedented epidemic wave of mosquito-borne viruses in the Pacific 2012-2014 First report of autochthonous transmission of Zika virus in Brazil Development of guidelines for the surveillance of invasive mosquitoes in Europe Aedes albopictus, an arbovirus vector: From the darkness to the light Control methods against invasive Aedes mosquitoes in Europe: a review The elimination of urban yellow fever in the Americas through the eradication of Aedes aegypti Aedes aegypti and Aedes aegypti-borne disease control in the 1990s: top down or bottom up. Charles Franklin Craig Lecture Public Health Response to Aedes aegypti and Ae. albopictus Mosquitoes Invading California, USA Introduction and control of three invasive mosquito species in the Netherlands, July-October 2010 Aedes aegypti on Madeira Island (Portugal): genetic variation of a recently introduced dengue vector A review of the invasive mosquitoes in Europe: ecology, public health risks, and control options
Neglected Tropical Diseases in the Anthropocene: The Cases of Zika, Ebola, and Other Infections	scientific article	en:Neglected Tropical Diseases in the Anthropocene: The Cases of Zika, Ebola, and Other Infections	2016-04	Zika virus	27058728	4825952	10.1371/journal.pntd.0004648	The Anthropocene is functionally and stratigraphically distinct from the Holocene Half Earth Southern Europe’s coming plagues: vector-borne neglected tropical diseases Vaccine Science Diplomacy: Expanding Capacity to Prevent Emerging and Neglected Tropical Diseases Arising from Islamic State (IS)--Held Territories Outbreak of ebola virus disease in Guinea: where ecology meets economy Visceral Leishmaniasis and HIV coinfection in East Africa Examining the relationship between urogenital schistosomiasis and HIV infection Neglected tropical diseases among the Association of Southeast Asian Nations (ASEAN): overview and update Quantifying Poverty as a Driver of Ebola Transmission Trachoma and Relative Poverty: A Case-Control Study The antipoverty vaccines Rescuing the bottom billion through control of neglected tropical diseases NTDs V.2.0: "blue marble health"--neglected tropical disease control and elimination in a shifting health policy landscape Dynamics of socioeconomic risk factors for neglected tropical diseases and malaria in an armed conflict Lassa fever in post-conflict sierra leone Combating the next lethal epidemic Social exclusion modifies climate and deforestation impacts on a vector-borne disease Ebola eradication may need wider partnership Dams and disease triggers on the lower Mekong river Five-year longitudinal assessment of the downstream impact on schistosomiasis transmission following closure of the Three Gorges Dam The role of human movement in the transmission of vector-borne pathogens Household transmission of leptospira infection in urban slum communities Environmental Transmission of Typhoid Fever in an Urban Slum Zika virus in the Americas: Early epidemiological and genetic findings Complete genome sequencing and phylogenetic analysis of dengue type 1 virus isolated from Jeddah, Saudi Arabia An update on the incidence of dengue gaining strength in Saudi Arabia and current control approaches for its vector mosquito Serogroup W-135 meningococcal disease during the Hajj, 2000 Hajj pilgrims' knowledge about acute respiratory infections The effects of weather and climate change on dengue Australia's dengue risk driven by human adaptation to climate change Combining climatic projections and dispersal ability: a method for estimating the responses of sandfly vector species to climate change Projected future distributions of vectors of Trypanosoma cruzi in North America under climate change scenarios Cutaneous leishmaniasis and sand fly fluctuations are associated with el niño in panamá El Niño Southern Oscillation and leptospirosis outbreaks in New Caledonia
Zika Virus: Diagnostics for an Emerging Pandemic Threat		en:Zika Virus: Diagnostics for an Emerging Pandemic Threat	2016-04	Zika virus	26888897	4809954	10.1128/JCM.00279-16	Zika virus. II. Pathogenicity and physical properties Yellow fever and Zika virus epizootics and enzootics in Uganda
Dengue, chikungunya … and the missing entity - Zika fever: A new emerging threat	scientific article	en:Dengue, chikungunya … and the missing entity - Zika fever: A new emerging threat	2016-04	dengue fever chikungunya Zika fever Zika virus	27257326	4878952	10.1016/j.mjafi.2016.02.017	Zika virus. I. Isolations and serological specificity Zika virus. II. Pathogenicity and physical properties
Global RNA recognition patterns of post-transcriptional regulators Hfq and CsrA revealed by UV crosslinking in vivo	scientific article	en:Global RNA recognition patterns of post-transcriptional regulators Hfq and CsrA revealed by UV crosslinking in vivo	2016-04-04				10.15252/embj.201593360	READemption-a tool for the computational analysis of deep-sequencing-based transcriptome data
Zika Virus and Birth Defects — Reviewing the Evidence for Causality	scientific article	en:Zika Virus and Birth Defects — Reviewing the Evidence for Causality	2016-04-13	Zika virus Zika fever birth defect microcephaly Zika virus outbreak in Latin America			10.1056/NEJMsr1604338	Increase in Reported Prevalence of Microcephaly in Infants Born to Women Living in Areas with Confirmed Zika Virus Transmission During the First Trimester of Pregnancy — Brazil, 2015 Association between Zika virus and microcephaly in French Polynesia, 2013–15: a retrospective study
Mapping global environmental suitability for Zika virus		en:Mapping global environmental suitability for Zika virus	2016-04-19	Zika virus			10.7554/elife.15272	Zika virus. I. Isolations and serological specificity
Four new species of Trigonopterus Fauvel from the island of New Britain (Coleoptera, Curculionidae)	scientific article	en:Four new species of Trigonopterus Fauvel from the island of New Britain (Coleoptera, Curculionidae)	2016-04-21	Trigonopterus chewbacca Trigonopterus obsidianus Trigonopterus puncticollis Trigonopterus silaliensis	27199589	4857049	10.3897/zookeys.582.7709	Ninety-eight new species of Trigonopterus weevils from Sundaland and the Lesser Sunda Islands One hundred and one new species of Trigonopterus weevils from New Guinea Integrative taxonomy on the fast track - towards more sustainability in biodiversity research Revision of the Australian species of the weevil genus Trigonopterus Fauvel Comparative thorax morphology of death-feigning flightless cryptorhynchine weevils (Coleoptera: Curculionidae) based on 3D reconstructions DNA barcoding for community ecology--how to tackle a hyperdiverse, mostly undescribed Melanesian fauna
Phylogeny of Zika Virus in Western Hemisphere, 2015	scientific article	en:Phylogeny of Zika Virus in Western Hemisphere, 2015	2016-05	Zika virus phylogeny	27088323	4861537	10.3201/eid2205.160065	Zika virus. I. Isolations and serological specificity
Isolation of Zika Virus from Febrile Patient, Indonesia	scientific article	en:Isolation of Zika Virus from Febrile Patient, Indonesia	2016-05	Zika virus Zika fever	27088970	4861529	10.3201/eid2205.151915	Zika virus. I. Isolations and serological specificity
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Complete Genome Sequences of Five Zika Virus Isolates: TABLE 1	scientific article	en:Complete Genome Sequences of Five Zika Virus Isolates: TABLE 1	2016-05-12	Zika virus Zika virus genome			10.1128/genomea.00377-16	Zika virus. I. Isolations and serological specificity
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Short message service (SMS) reminders and real-time adherence monitoring improve antiretroviral therapy adherence in rural Uganda		en:Short message service (SMS) reminders and real-time adherence monitoring improve antiretroviral therapy adherence in rural Uganda	2016-05-15		26760452	4851578	10.1097/QAD.0000000000001021	The role of social capital in successful adherence to antiretroviral therapy in Africa
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A Cost-Effectiveness Tool for Informing Policies on Zika Virus Control	scientific article	en:A Cost-Effectiveness Tool for Informing Policies on Zika Virus Control	2016-05-20	Zika virus	27205899	4874682	10.1371/journal.pntd.0004743	Zika Virus Outbreak on Yap Island, Federated States of Micronesia
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Bioinformatic analysis reveals the expression of unique transcriptomic signatures in Zika virus infected human neural stem cells	scientific article	en:Bioinformatic analysis reveals the expression of unique transcriptomic signatures in Zika virus infected human neural stem cells	2016-06-10	Zika virus neural stem cell	27293547	4902960	10.1186/s13578-016-0110-x	Molecular evolution of Zika virus during its emergence in the 20(th) century Zika Virus: New Clinical Syndromes and Its Emergence in the Western Hemisphere Guillain-Barré Syndrome outbreak associated with Zika virus infection in French Polynesia: a case-control study Zika virus infection in a traveller returning to Europe from Brazil, March 2015 Zika virus, a cause of fever in Central Java, Indonesia Zika virus in Brazil and macular atrophy in a child with microcephaly Zika Virus Associated with Microcephaly Increase in Reported Prevalence of Microcephaly in Infants Born to Women Living in Areas with Confirmed Zika Virus Transmission During the First Trimester of Pregnancy — Brazil, 2015 Zika Virus Infects Human Cortical Neural Progenitors and Attenuates Their Growth New estimates of the prevalence of neurological and sensory sequelae and mortality associated with congenital cytomegalovirus infection Human cytomegalovirus infection causes premature and abnormal differentiation of human neural progenitor cells Zika virus impairs growth in human neurospheres and brain organoids Studies on protein and nucleic acid metabolism in virus-infected mammalian cells. 1. Encephalomyocarditis virus in Krebs II mouse-ascites-tumour cells Autosomal Recessive Primary Microcephaly (MCPH): clinical manifestations, genetic heterogeneity and mutation continuum A centrosomal mechanism involving CDK5RAP2 and CENPJ controls brain size MOZ and MORF, two large MYSTic HATs in normal and cancer stem cells Clinical profile of children with developmental delay and microcephaly MalaCards: an integrated compendium for diseases and their annotation Signaling danger: toll-like receptors and their potential roles in kidney disease Cytoscape: a software environment for integrated models of biomolecular interaction networks ClueGO: a Cytoscape plug-in to decipher functionally grouped gene ontology and pathway annotation networks Human induced pluripotent stem cell-derived models to investigate human cytomegalovirus infection in neural cells Expression Analysis Highlights AXL as a Candidate Zika Virus Entry Receptor in Neural Stem Cells Neuropathogenesis of congenital cytomegalovirus infection: disease mechanisms and prospects for intervention Toll-like receptor signalling TLR signaling pathways Is NF-kappaB a good target for cancer therapy? Hopes and pitfalls Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing Genetic and serologic properties of Zika virus associated with an epidemic, Yap State, Micronesia, 2007 Dengue Dengue virus, a flavivirus, propagates in human bone marrow progenitors and hematopoietic cell lines Maturation of dengue virus nonstructural protein 4B in monocytes enhances production of dengue hemorrhagic fever-associated chemokines and cytokines Mechanisms of dengue virus-induced bone marrow suppression FunRich: An open access standalone functional enrichment and interaction network analysis tool
Priority of discovery in the life sciences	scientific article	en:Priority of discovery in the life sciences	2016-06-16	Preprint biomedicine			10.7554/eLife.16931	Rescuing US biomedical research from its systemic flaws Preprints for the life sciences Priorities in Scientific Discovery: A Chapter in the Sociology of Science Making the most of peer review The Role of the Priority Rule in Science Accelerating scientific publication in biology
Revisiting Cohen et al. 2015, Cohen et al. 2014 and Waalkes et al. 2014: a bayesian re-analysis of tumor incidences	scientific article	en:Revisiting Cohen et al. 2015, Cohen et al. 2014 and Waalkes et al. 2014: a bayesian re-analysis of tumor incidences	2016-06-20	Bayesian statistics lung cancer			10.1007/s00204-016-1749-0	Carcinogenic effects of "whole-life" exposure to inorganic arsenic in CD1 mice Renal, hepatic, pulmonary and adrenal tumors induced by prenatal inorganic arsenic followed by dimethylarsinic acid in adulthood in CD1 mice Lung tumors in mice induced by "whole-life" inorganic arsenic exposure at human-relevant doses
Why Most Clinical Research Is Not Useful	scientific article	en:Why Most Clinical Research Is Not Useful	2016-06-21				10.1371/journal.pmed.1002049	Biomedical research: increasing value, reducing waste Why most published research findings are false
Uveitis Associated with Zika Virus Infection	scientific article	en:Uveitis Associated with Zika Virus Infection	2016-06-22	Zika virus Zika fever Uveitis			10.1056/NEJMc1603618	Phylogeny of the genus Flavivirus Zika Virus Genetic and serologic properties of Zika virus associated with an epidemic, Yap State, Micronesia, 2007 Dengue virus identification by the plaque reduction neutralization test Standardization of uveitis nomenclature for reporting clinical data. Results of the First International Workshop
Zika virus complete genome from Salvador, Bahia, Brazil		en:Zika virus complete genome from Salvador, Bahia, Brazil	2016-07	Zika virus genome Zika virus			10.1016/j.meegid.2016.03.030	Zika virus genome from the Americas Molecular evolution of Zika virus during its emergence in the 20(th) century Zika Virus Outbreak on Yap Island, Federated States of Micronesia Zika virus in Gabon (Central Africa)--2007: a new threat from Aedes albopictus?
From Shakespeare to Defoe: malaria in England in the Little Ice Age	scientific article	en:From Shakespeare to Defoe: malaria in England in the Little Ice Age		infectious disease	10653562	2627969	10.3201/eid0601.000101	Can increasing carbon dioxide cause climate change?
Cerebral malaria: mysteries at the blood-brain barrier	scientific article	en:Cerebral malaria: mysteries at the blood-brain barrier		infectious disease	22460644	3396698	10.4161/viru.19013	Tissue distribution of migration inhibitory factor and inducible nitric oxide synthase in falciparum malaria and sepsis in African children
A critical evaluation of material safety data sheets (MSDSs) for engineered nanomaterials	scientific article	en:A critical evaluation of material safety data sheets (MSDSs) for engineered nanomaterials			26766894	4707963	10.1016/j.jchas.2012.02.002	Unusual inflammatory and fibrogenic pulmonary responses to single-walled carbon nanotubes in mice Skin as a route of exposure and sensitization in chronic beryllium disease
Mother's menopausal age is associated with her daughter's early follicular phase urinary follicle-stimulating hormone level	scientific article	en:Mother's menopausal age is associated with her daughter's early follicular phase urinary follicle-stimulating hormone level		obstetrics and gynaecology	18779679	2856641	10.1097/gme.0b013e31816429e5	Luteinizing Hormone in Premenopausal Women May Stimulate Uterine Leiomyomata Development Detecting pre-ovulatory luteinizing hormone surges in urine
Design Optimization of a Portable Thermophoretic Precipitator Nanoparticle Sampler	scientific article	en:Design Optimization of a Portable Thermophoretic Precipitator Nanoparticle Sampler			26702194	4685717	10.1080/02786826.2012.680551	Meeting report: hazard assessment for nanoparticles--report from an interdisciplinary workshop Principles for characterizing the potential human health effects from exposure to nanomaterials: elements of a screening strategy
Deposition Uniformity of Coal Dust on Filters and Its Effect on the Accuracy of FTIR Analyses for Silica	scientific article	en:Deposition Uniformity of Coal Dust on Filters and Its Effect on the Accuracy of FTIR Analyses for Silica			26719603	4692056	10.1080/02786826.2013.787157	Evaluating portable infrared spectrometers for measuring the silica content of coal dust Performance of high flow rate samplers for respirable particle collection Rapidly progressive coal workers' pneumoconiosis in the United States: geographic clustering and other factors
Aerosol Generation by Modern Flush Toilets	scientific article	en:Aerosol Generation by Modern Flush Toilets			26635429	4666014	10.1080/02786826.2013.814911	Lifting the lid on toilet plume aerosol: a literature review with suggestions for future research Norwalk virus shedding after experimental human infection
Informatics and standards for nanomedicine technology	scientific article	en:Informatics and standards for nanomedicine technology			21721140	3189420	10.1002/wnan.152	Chemical Entities of Biological Interest: an update Ontology-driven indexing of public datasets for translational bioinformatics Drug delivery and nanoparticles:applications and hazards Bioimage informatics: a new area of engineering biology The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration ChEBI: a database and ontology for chemical entities of biological interest A simple spreadsheet-based, MIAME-supportive format for microarray data: MAGE-TAB Design and implementation of microarray gene expression markup language (MAGE-ML) Gene ontology: tool for the unification of biology. The Gene Ontology Consortium
Development of a job-exposure matrix for exposure to total and fine particulate matter in the aluminum industry	scientific article	en:Development of a job-exposure matrix for exposure to total and fine particulate matter in the aluminum industry			24022670	4067135	10.1038/jes.2013.53	Environmental tobacco smoke exposure and ischaemic heart disease: an evaluation of the evidence
Maternal-infant biomarkers of prenatal exposure to arsenic and manganese	scientific article	en:Maternal-infant biomarkers of prenatal exposure to arsenic and manganese			26306926	4770909	10.1038/jes.2015.45	A prospective cohort study of the association between drinking water arsenic exposure and self-reported maternal health symptoms during pregnancy in Bangladesh Water arsenic exposure and children's intellectual function in Araihazar, Bangladesh
The Emergence of Zika Virus as a Global Health Security Threat: A Review and a Consensus Statement of the INDUSEM Joint working Group (JWG)	scientific article	en:The Emergence of Zika Virus as a Global Health Security Threat: A Review and a Consensus Statement of the INDUSEM Joint working Group (JWG)		Zika virus	27013839	4785754	10.4103/0974-777X.176140	Zika virus. II. Pathogenicity and physical properties
Serologic studies of encephalitis in Japan. I. Hemagglutination-inhibiting, complement-fixing, and neutralizing antibody following overt Japanese B encephalitis	scientific article	en:Serologic studies of encephalitis in Japan. I. Hemagglutination-inhibiting, complement-fixing, and neutralizing antibody following overt Japanese B encephalitis			13376908			Zika virus infections in Nigeria: virological and seroepidemiological investigations in Oyo State
Role of Education in HIV Clinical Outcomes in a Tuberculosis Endemic Setting		en:Role of Education in HIV Clinical Outcomes in a Tuberculosis Endemic Setting			23708680	3888482	10.1177/2325957413488185	The role of social capital in successful adherence to antiretroviral therapy in Africa

work

label	description	title	publication date	main subject	PubMed ID	PMCID	DOI	cites
Cassius Marcellus Clay in St. Petersburg		en:Cassius Marcellus Clay in St. Petersburg	1975	Cassius M. Clay				The life of Cassius Marcellus Clay : memoirs, writings, and speeches, showing his conduct in the overthrow of American slavery, the salvation of the Union, and the restoration of the autonomy of the states
Cassius M. Clay: Freedom's Champion	biography by Keven McQueen	en:Cassius M. Clay: Freedom's Champion	2001	Cassius M. Clay				Lion of White Hall

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