User:Fnielsen/Autolists/My papers

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label	main subject	language of work or name	number of pages	first line	author name string	sponsor	copyright license	price
"The sum of all human knowledge": A systematic review of scholarly research on the content of Wikipedia	academic studies about Wikipedia Wikipedia English Wikipedia systematic review	English	27	en:Wikipedia may be the best-developed attempt thus far to gather all human knowledge in one place.		Lundbeck Foundation The Danish Council for Strategic Research		38
A New ANEW: Evaluation of a Word List for Sentiment Analysis in Microblogs	sentiment analysis X	English	6	en:Sentiment analysis of microblogs such as Twitter has recently gained a fair amount of attention		The Danish Council for Strategic Research Responsible Business in the Blogosphere		0
A fielded wiki for personality genetics	wiki genetics personality trait	English	2	en:I describe a fielded wiki, where a Web form interface allows the entry, analysis and visualization of results from scientific papers in the personality genetics domain.		Center for Integrated Molecular Brain Imaging		15
A nonlinear relationship between cerebral serotonin transporter and 5-HT(2A) receptor binding: an in vivo molecular imaging study in humans	5-hydroxytryptamine receptor 2A solute carrier family 6 member 4 serotonin	English	7	en:Serotonergic neurotransmission is involved in the regulation of physiological functions such as mood, sleep, memory, and appetite.		Lundbeck Foundation Danish Council for Independent Research \| Medical Sciences		0
Action and language mechanisms in the brain: data, models and neuroinformatics	neuroinformatics	English	17	en:We assess the challenges of studying action and language mechanisms in the brain, both singly and in relation to each other to provide a novel perspective on neuroinformatics, integrating the development of databases for encoding – separately or together – neurocomputational models and empirical data that serve systems and cognitive neuroscience.				43.69
Alignment of Wikidata lexemes and Det Centrale Ordregister	lexicographical data in Wikidata Det Centrale Ordregister ontology alignment Wikibase lexeme Wikidata	English	5
Author cocitation analysis of articles from “Neurolmage”	cognitive neuroscience co-citation NeuroImage	English	1
Automatic anatomical labeling of Talairach coordinates and generation of volumes of interest via the BrainMap database	stereotaxic atlas
Brede Wiki: A neuroinformatics Web service with structured information	neuroinformatics wiki web service structured data	English		en:The Brede Wiki is a Web service running the MediaWiki software and containing structured information from neuroscience, e.g., data from original research peer-reviewed journal articles and general neuroscience information such as a brain region ontology.				0
Brede tools and federating online neuroinformatics databases	neuroinformatics federated database system database	English	11	en:As open science neuroinformatics databases the Brede Database and Brede Wiki seek to make distribution and federation of their content as easy and transparent as possible.		Lundbeck Foundation		43.69
BredeQuery: Coordinate-Based Meta-analytic Search of Neuroscientific Literature from the SPM Environment	neuroinformatics information retrieval scientific literature meta-analysis	English	11	en:Large amounts of neuroimaging studies are collected and have changed our view on human brain function.		Lundbeck Foundation		29.95
Canonical Ridge Analysis with Ridge Parameter Optimization	canonical correlation analysis	English	1
Cerebral 5-HT2A receptor binding is increased in patients with Tourette's syndrome	Tourette syndrome 5-hydroxytryptamine receptor 2A patient	English	8	en:Experimental and clinical data have suggested that abnormalities in the serotonergic neurotransmissions in frontal-subcortical circuits are involved in Tourette's syndrome.		A. P. Møller and Chastine Mc-Kinney Møller Foundation John and Birthe Meyer Foundation Augustinus Fonden Villum Foundation		No/unknown value
Cluster analysis of activity-time series in motor learning	motor learning cluster analysis	English	11			Danish Council for Independent Research \| Medical Sciences		38
Clustering of scientific citations in Wikipedia	Wikipedia scientific citation cluster analysis citation analysis science information on Wikipedia	English	7	en:The instances of templates in Wikipedia form an interesting data set of structured information				0
Collective remembering of organizations: Co-construction of organizational pasts in Wikipedia	Wikipedia corporate communication collective memory English Wikipedia	English	17	en:Purpose – How organizations’ pasts are presented to the public is crucial, because this presentation shapes corporate reputations.				24
Combining embedding methods for a word intrusion task	word embedding knowledge graph embedding		2			DABAI
Combining embedding methods for a word intrusion task	Danish embedding	English	4			DABAI Teaching platform for developing and automatically tracking early stage literacy skill
Consensus inference in neuroimaging	functional magnetic resonance imaging ensemble learning neuroimaging	English	7	en:We introduce model averaging in neuroimaging.				35.95
Creating Semantic Representations	distributional semantics	English	21			DABAI
Danish in Wikidata lexemes	Wikibase lexeme lexeme Wikidata Danish lexicographical data in Wikidata	English	6			DABAI Teaching platform for developing and automatically tracking early stage literacy skill
Databasing molecular neuroimaging studies	cognitive neuroscience neuroimaging	English
Do bridges dream of water pollutants? Towards DreamsKG, a knowledge graph to make digital access for sustainable environmental assessment come true	knowledge graph sustainability relationship extraction	English	7		Annika Butzbach	Digitally support Environment Assessment for Sustainable Development Goals
Effects of spatial normalization on detection of perirhinal cortex activation in individual subjects using fMRI	health policy functional magnetic resonance imaging
Endogenous plasma estradiol in healthy men is positively correlated with cerebral cortical serotonin 2A receptor binding	17α/β-estradiol 5-hydroxytryptamine receptor 2A serotonin	English	10	en:Sex-hormones influence brain function and are likely to play a role in the gender predisposition to mood and anxiety disorders.				39.95
Environmental impact assessment reports in Wikidata and a Wikibase	environmental impact assessment report Wikidata Wikibase environmental impact assessment	English	8		Annika Butzbach	Digitally support Environment Assessment for Sustainable Development Goals
Excavating the mother lode of human-generated text: A systematic review of research that uses the wikipedia corpus	Wikipedia text corpus systematic review	English	25	en:Although primarily an encyclopedia, Wikipedia's expansive content provides a knowledgebase that has been continuously exploited by researchers in a wide variety of domains.				35.95
Experiences with Matlab and VRML in Functional Neuroimaging Visualizations	Virtual Reality Modeling Language MATLAB neuroimaging visualization functional neuroimaging		6
Exploring fMRI data for periodic signal components	functional magnetic resonance imaging normal-inverse-gamma distribution Spectral density estimation Pitch detection algorithm	English	10	en:We use a Bayesian framework to detect periodic components in fMRI data.		National Institutes of Health Mapping visual cortical regions in awake, behaving monkey using functional mri		35.95
Extracting collective probabilistic forecasts from web games	prediction market	English	10	en:Game sites on the World Wide Web draw people from around the world with specialized interests, skills, and knowledge.				15
Finding related functional neuroimaging volumes	image retrieval functional neuroimaging neuroimaging	English	11	en:We describe a content-based image retrieval technique for finding related functional neuroimaging experiments by voxelization of sets of stereotactic coordinates in Talairach space, comparing the volumes and reporting related volumes in a sorted list.				35.95
Frontolimbic Serotonin 2A Receptor Binding in Healthy Subjects Is Associated with Personality Risk Factors for Affective Disorder	neuroticism 5-hydroxytryptamine receptor 2A serotonin	English	8	en:Serotonergic dysfunction has been associated with affective disorders.		Lundbeck Foundation Sawmill owner Jeppe Juhl and Wife Ovita Juhls Foundation The Foundation of 1870 1991 Pharmacy Foundation University of Copenhagen Faculty of Health and Medical Sciences Danish Council for Independent Research \| Medical Sciences		35.95
Generalizable patterns in neuroimaging: how many principal components?	principal component analysis functional magnetic resonance imaging neuroimaging	English	11	en:Generalization can be defined quantitatively and can be used to assess the performance of principal component analysis (PCA).				35.95
Genetic variants and brain binding potentials: Lost in translation?	cognitive neuroscience	English
Geospatial data and Scholia	geographic information SPARQL Wikidata Scholia	English	7			DABAI	Creative Commons Attribution-ShareAlike 4.0 International
Good Friends, Bad News - Affect and Virality in Twitter	X viral phenomenon news analytics sentiment analysis emotional contagion spreadability	English	10	en:The link between affect, defined as the capacity for sentimental arousal on the part of a message, and virality, defined as the probability that it be sent along, is of significant theoretical and practical importance, e.g. for viral marketing.		The Danish Council for Strategic Research Responsible Business in the Blogosphere		29.95
Inferring visual semantic similarity with deep learning and Wikidata: Introducing imagesim-353	semantic similarity Wikidata deep learning	English	6			DABAI
Interactive information visualization in neuroimaging	information visualization neuroimaging visualization	English	4	en:We describe a virtual environment for interactive visualiza-tion of 3D neuroimages.				15
Knowledge graphs for empirical concept retrieval	knowledge graph explainable AI	English	18		Maria Mandrup Fogh Ellen Marie Gaunby Jørgensen
Lexemes in Wikidata: 2020 status	Wikidata Linguistic Linked Open Data Wikibase lexeme lexicographical data in Wikidata	English	5			DABAI Teaching platform for developing and automatically tracking early stage literacy skill
Linking ImageNet WordNet Synsets with Wikidata	ontology alignment Wikidata ImageNet WordNet machine learning	English	6			DABAI	Creative Commons Attribution 4.0 International
Literature, Geolocation and Wikidata	Wikidata literature geotagging data quality of Wikidata	English	4	en:Littar was the second-prize winning entry in an app competition.				0
Lost in localization: A solution with neuroinformatics 2.0?	neuroinformatics Web 2.0	English	3	en:The commentary by Derrfuss and Mar (Derrfuss, J., Mar, R.A., 2009. Lost in localization: The need for a universal coordinate database. NeuroImage, doi:10.1016/j.neuroimage.2009.01.053.) discusses some of the limitations of the present databases and calls for a universal coordinate database.				35.95
Mass meta-analysis in Talairach space	meta-analysis functional neuroimaging	English	8	en:We provide a method for mass meta-analysis in a neuroinformaticsdatabase containing stereotaxic Talairach coordinates from neuroimaging experiments.		Villum Foundation		0
Mining for associations between text and brain activation in a functional neuroimaging database	association functional neuroimaging neuroimaging database	English	12	en:We describe a method for mining a neuroimaging database for associations between text and brain locations.				43.69
Mining the posterior cingulate: Segregation between memory and pain components	posterior cingulate	English	13	en:We present a general method for automatic meta-analyses in neuroscience and apply it on text data from published functional imaging studies to extract main functions associated with a brain area-the posterior cingulate cortex (PCC).		Villum Foundation		35.95
Modeling of activation data in the BrainMap database: Detection of outliers	Multivariate kernel density estimation functional neuroimaging anomaly detection database	English	11	en:We describe a system for meta-analytical modeling of activation foci from functional neuroimaging studies.				38
Modeling text with generalizable Gaussian mixtures	mixture model topic model	English	4	en:We apply and discuss generalizable Gaussian mixture (GGM) models for text mining.				33
Modeling the haemodynamic response in fMRI using smooth FIR filters	Finite impulse response filter functional magnetic resonance imaging regularization hemodynamics	English	14	en:Modeling the hemodynamic response in functional magnetic resonance (fMRI) experiments is an important aspect of the analysis of functional neuroimages.				33
Modelling the fMRI response using smooth FIR filters	functional magnetic resonance imaging blood-oxygen-level dependent imaging Finite impulse response filter	English	1
Neuroimaging of human pain and virtual reality modelling	pain virtual reality neuroimaging	English	7
Neuroinformatics based on VRML	Virtual Reality Modeling Language neuroinformatics	English	1
Neuroinformatics in Functional Neuroimaging	neuroinformatics functional neuroimaging	English	241	en:This Ph.D. thesis proposes methods for information retrieval in functional neuroimaging through automatic computerizedauthority identification, and searching and cleaning in a neuroscience database.
On clustering fMRI time series	cluster analysis functional magnetic resonance imaging	English	13	en:Analysis of fMRI time series is often performed by extracting one or more parameters for the individual voxels.				35.95
Online open neuroimaging mass meta-analysis	wiki meta-analysis neuroimaging MediaWiki psychiatry neuroanatomy	English	5
Online open neuroimaging mass meta-analysis with a wiki	wiki meta-analysis neuroimaging	English	13	en:We describe a system for meta-analysis where a wiki stores numerical data in a simple comma-separated values format and a web service performs the numerical statistical computation.				29.95
Open semantic analysis: The case of word level semantics in Danish	Danish semantic similarity word embedding text corpus	English	5	en:The present research is motivated by the need for accessible and efficient tools for automated semantic analysis in Danish.		Innovation Fund Denmark
Ordia: A Web Application for Wikidata Lexemes	Ordia Wikidata Wikibase lexeme	English	6			DABAI Teaching platform for developing and automatically tracking early stage literacy skill
Persistence of Web references in scientific research	link rot scientific citation	English	6	en:The lack of persistence of Web references has called into question the increasingly common practice of citing URLs in scientific papers.				33
Persistence of information on the web: analyzing citations contained in research articles	link rot scientific citation citation analysis	English	8	en:We analyze the persistence of information on the web, looking at the percentage of invalid URLs contained in academic articles within the CiteSeer (ResearchIndex) database.				15
Plurality and resemblance in fMRI data analysis	functional magnetic resonance imaging data analysis	English	22	en:We apply nine analytic methods employed currently in imaging neuroscience to simulated and actual BOLD fMRI signals and compare their performances under each signal type.				35.95
Right Temporoparietal Cortex Activation during Visuo-proprioceptive Conflict	proprioception	English	4	en:The conflict between vision and proprioception has been proposed to explain why healthy subjects perform worse than proprioceptively deafferented patients in conditions with optical displacement, e.g. novel mirror drawing.		Rigshospitalet Mapping visual cortical regions in awake, behaving monkey using functional mri		0
Robustifying Scholia: paving the way for knowledge discovery and research assessment through Wikidata	Scholia WikiCite Wikidata SPARQL Robustifying Scholia data mining knowledge extraction	English	16				Creative Commons Attribution 4.0 International
Scholia - March 2017	Scholia						GNU General Public License, version 3.0
Scholia and scientometrics with Wikidata	Wikidata scientometrics Semantic Web web application reference management software SPARQL bibliographic metadata scientific collaboration network WikiCite Scholia citation analysis scholarly profiling	English	16	en:Scholia is a tool to handle scientific bibliographic information through Wikidata.		Innovation Fund Denmark	Creative Commons Attribution 4.0 International
Scholia, Scientometrics and Wikidata	Wikidata scientometrics WikiCite Semantic Web web service reference management software SPARQL bibliographic metadata scientific collaboration network Scholia citation analysis scholarly profiling data quality of Wikidata	English	23	en:Scholia is a tool to handle scientific bibliographic information through Wikidata.		Innovation Fund Denmark	Creative Commons Attribution 4.0 International
Scientific citations in Wikipedia	Wikipedia scientific citation scientometrics citation analysis altmetrics science information on Wikipedia citation English Wikipedia	English		en:The Internet-based encyclopaedia Wikipedia has grown to become one of the most visited Web sites on the Internet, but critics have questioned the quality of entries.		Lundbeck Foundation	Creative Commons Attribution-ShareAlike 3.0 Unported	0
Seasonal changes in brain serotonin transporter binding in short serotonin transporter linked polymorphic region-allele carriers but not in long-allele homozygotes	solute carrier family 6 member 4 serotonin	English	7	en:A polymorphism in the promoter region of the serotonin transporter gene (5-HTTLPR) has been associated with seasonality both in patients with seasonal affective disorder and in the general population.		Lundbeck Foundation John and Birthe Meyer Foundation		35.95
Sequential collaboration network with sentiment coloring	sentiment analysis social network Wikipedia collaboration	English	1
Serotonin transporter binding in the hypothalamus correlates negatively with tonic heat pain ratings in healthy subjects: a [11C]DASB PET study	solute carrier family 6 member 4 pain serotonin	English	8	en:There is a large body of evidence that the serotonergic system plays an important role in the transmission and regulation of pain.				35.95
Similar brain networks for detecting visuo-motor and visuo-proprioceptive synchrony	brain proprioception	English	5	en:The ability to recognize feedback from own movement as opposed to the movement of someone else is important for motor control and social interaction.		Rigshospitalet		35.95
Software for Creating and Analyzing Semantic Representations	software semantics GloVe natural language processing fastText SpaCy Natural Language Toolkit Pattern Word2vec	English	19			DABAI
Space-time analysis of fMRI by feature space clustering	cluster analysis functional magnetic resonance imaging	English	1
Strategies of Legitimacy Through Social Media: The Networked Strategy	corporate social responsibility social media	English	31	en:How can corporations develop legitimacy when coping with stakeholders who have multiple, often conflicting sustainable development (SD) agendas?		The Danish Council for Strategic Research Carlsberg Foundation Responsible Business in the Blogosphere		38
Synia: Displaying data from Wikibases	Wikidata Wikibase Synia	English	3
The Brede database: A small database for functional neuroimaging	functional neuroimaging meta-analysis database	English	1			Mapping visual cortical regions in awake, behaving monkey using functional mri
The Center for Integrated Molecular Brain Imaging (Cimbi) database	medical database	English	7	en:We here describe a multimodality neuroimaging containing data from healthy volunteers and patients, acquired within the Lundbeck Foundation Center for Integrated Molecular Brain Imaging (Cimbi) in Copenhagen, Denmark.		Lundbeck Foundation Rigshospitalet	Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International	0
The Cerebellum	cerebellum	English	15				Creative Commons Attribution-ShareAlike 3.0 Unported
The Danish Gigaword Corpus	Danish text corpus	English	9		Claus Ladefoged Jens Madsen
The Danish Gigaword Project	Danish text corpus	English	6		Claus Ladefoged
The EU NanoSafety Cluster as Linked Data visualized with Scholia	EU NanoSafety Cluster Scholia Wikidata linked data	English	6			NanoCommons	Creative Commons Attribution
The People’s Encyclopedia Under the Gaze of the Sages: A Systematic Review of Scholarly Research on Wikipedia	Wikipedia academic studies about Wikipedia encyclopedia systematic review	English	138	en:Wikipedia has become one of the ten most visited sites on the Web, and the world’s leading source of Web reference information.				0
The Real Power of Artificial Markets	prediction market	English	2	en:Assessing the probabilities of future events is a problem often faced by science policymakers.				30
The personality trait openness is related to cerebral 5-HTT levels	openness to experience 5-HTTLPR solute carrier family 6 member 4	English	6	en:Potentiation of serotonergic transmission increases cognitive flexibility, but can in other circumstances increase sensitivity to stressful environmental cues.		Lundbeck Foundation		35.95
Validating Danish Wikidata lexemes	Wikidata Shape Expressions Wikibase lexeme Danish lexeme lexicographical data in Wikidata	English	5			Teaching platform for developing and automatically tracking early stage literacy skill DABAI
Visualizing data mining results with the Brede tools	neuroinformatics data mining visualization	English	12	en:A few neuroinformatics databases now exist that record results from neuroimaging studies in the form of brain coordinates in stereotaxic space.		Lundbeck Foundation	Creative Commons Attribution	No/unknown value
Wembedder: Wikidata entity embedding web service	Wikidata knowledge graph embedding Resource Description Framework web service Wembedder	English	3			DABAI	Creative Commons Attribution 4.0 International
WikiCite and Scholia - a Linked Open Data approach to exploring the scholarly literature and related resources	WikiCite Scholia linked open data	English
WikiCite: Citations needed for the sum of all human knowledge	WikiCite	English	39				Creative Commons Attribution 4.0 International
Wikidata and Scholia as a hub linking chemical knowledge	Wikidata Scholia chemistry	English	1
Wikidata og Scholia: Det redigerbare Linked Open Data med bibliografiske data	Wikidata Scholia linked open data bibliographic metadata	Danish	3
Wikipedia in the eyes of its beholders: A systematic review of scholarly research on Wikipedia readers and readership	academic studies about Wikipedia Wikipedia health information on Wikipedia English Wikipedia readership of Wikipedia systematic review	English	23	en:Hundreds of scholarly studies have investigated various aspects of Wikipedia.		Lundbeck Foundation The Danish Council for Strategic Research		38
Wikipedia research and tools: review and comments	Wikipedia	English	66	en:I here give an overview of users interact with each other, how much Wikipedia and wiki research andthey contribute and most of this kind of re-tools.				No/unknown value
fMRI neuroinformatics	neuroinformatics functional magnetic resonance imaging	English	8	en:Functional magnetic resonance imaging (fMRI) generates vast amounts of data.		Villum Foundation National Institutes of Health		33

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