User:Fnielsen/Brede Database

The Brede Database available from http://neuro.compute.dtu.dk/services/brededatabase/ consists of data from functional neuroimaging papers.

The data is available as XML: http://neuro.imm.dtu.dk/services/brededatabase/wobibs.xml

Analysis softwareEdit

Data about he software used in a paper is available in the <analysisSoftware> tag in the wobibs.xml XML file. This data can be extract with

grep analysisSoftware wobibs.xml | perl -ne '/>(.*?)</; print $1 . "\n"' | sort | uniq

The result along with augmented information about the Wikidata identifier is:

AFNI  Q4751099
AFNI 2.23
AIR  Q41795204
AIR 3.0
Alice
AMIR  Q41795719
Analyze  Q2845288
ASA 2.2
AUTOMATED
BAMS
BRAIN
BRAINS
BrainTools
BrainVoyager  Q41793788
BrainVoyager 3.5
BrainVoyager 4.01
CBA
CHSN
DOT
FIASCO
fMRLAB
In-house
In-house (IVANA AVS-modules)
In-house (Xiong et al., 1995)
LIPSIA  Q41566819
MEASURE
Medx
MEDx
MINC-TRACC
MIPS
MIRIT
MNI_AutoReg
MPITool
MRIcro  Q41793750
PIXAR
PMOD
SN
SPM  Q41566485
SPM2  Q41566670
SPM95  Q41795649
SPM96  Q41793739
SPM97  Q41793744
SPM97d
SPM97d/SPM99
SPM99  Q41566546
SPM99b
SPM99d
Stimulate
Yale fMRI Analysis Package