User:Research Bot
This is an account operated by User:Daniel Mietchen for semi-automated or tool-assisted edits on research-related topics.
Bot flag edit
This user account is a bot with a bot flag. The bot is operated by Daniel Mietchen.
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Frequently used tools edit
- QuickStatements (Q20084080)
- e.g. on the basis of
- Source Metadata
- New Resolve Authors
- SPARQL queries
- PubMed API
- Constraint violations
- e.g. on the basis of
- Descriptioner
- Fatameh
- PubMed
- PMC: harmonized
- DOI: harmonized
Maintenance queries edit
- Papers with "zika" in the title but no P921 tag for Q202864 (including known exceptions)
- variant optimized for use with QuickStatements
- same for "incidental finding"
- for Edits on that basis, use
S887 Q69652283
(note the space has actually to be a tab, but MediaWiki does not display that properly), i.e. based on heuristic (P887) with value inferred from title (Q69652283) - e.g.
sed 's/$/\tP921\tQ1492760\tS887\tQ69652283/' sandbox1.txt > sandbox2.txt
- for Edits on that basis, use
- "data sharing"
- "phase 1"/ "phase i" trial
- search for "goat cheese" on Wikipedia
- Papers with "steppe" in the title
- publications with "tuberculosis" and/ or "Mycobacterium tuberculosis" in the title
- papers about amyotrophic lateral sclerosis and subtypes
- Papers about taxa
- viral transmission ontology skeleton
- TABernacle for items without P31 or P279 with "virus" in their title
- search for publication by author name year, e.g.
- Wang 2018 dna aptamer
- A variant that takes into account author (P50)
- A further variant for titles containing elements of an author's name
- A variant that takes into account author (P50)
- dell 1972 a new genus and species of atelecyclid crab from new zealand
- see also Scientific papers about amino acid changes due to mutation
- Wang 2018 dna aptamer
- search for author name string variants (using Wang Zhang as an example)
- Papers with the same PMCID
- instances of scientific articles without a description in English
- items with PubMed ID but no English labels or titles
- scientific journals without "main subject"
- scientific journals as "main subject"
- example fix
- Instructions for semi-automated fix
- Titles containing HTML escape sequences
- would be great to have a tool to
- fix that
- ping database providers/ publishers about it
- would be great to have a tool to
- Labels containing markup tags
- Title: "[Not Available]"
- topics used in P921 (main subject) statements on items about scientific papers, ordered by popularity
- Newspapers with an infobox in their enwiki page
- Most cited articles without P921
- papers without P921 (main subject) statement but with "virus" in the title
- PMC papers without topic but with ORCID author
- Scientific articles with titles that are all uppercase
- papers with both a P2093 (author name string) and a P50 (author) for the same P1545 (series ordinal)
- most cited female scientists
- Wikipedia articles about female scientists
- Scientific articles with English titles in brackets
- data model for datasets
- reference stats for availability of external datasets
- number of triples in Wikidata
- 4147614103 at 01:05, 9 December 2017 (UTC)
- 4170720958 at 23:47, 10 December 2017 (UTC)
- 4184084283 at 01:05, 12 December 2017 (UTC)
- 4203603264 at 01:05, 15 December 2017 (UTC)
- 4443031326 at 16:45, 16 January 2018 (UTC)
- 4444002349 at 11:59, 17 January 2018 (UTC)
- 4444539592 at 19:47, 17 January 2018 (UTC)
- People with an ORCID but no occupation
- current count
- see also this GitHub ticket
- People with an ORCID but no gender
- Authors of scientific articles who have no occupation
- author names that are on multiple papers with at least three identical co-authors identified by item
- hat tip to Magnus
- dedicated list does not work yet: Wikidata:WikiProject Source MetaData/Wikidata lists/Author name strings with same co-authors on multiple works
- Journals without a main topic
- Papers with P50 but not P921
- Papers with P921 but no P50
- number of publications per year
- Places that have been indicated as the topic of scientific articles indexed in Wikidata
- Number of papers where at least one author has an ORCIDs
- Number of papers where all authors have ORCIDs
- Paper with the largest number of authors with ORCIDs
- Journal with the highest average percentage of ORCIDs amongst recent authors
- 3D files on Commons
- Papers with a title and an alias but no label
- Most cited surnames
- Researchers where an alias is equal to the label
- Items with ORCID but no description
- Wikidata items that are subclasses of disease and have statements referenced to Wikidata items that are instances of scientific article
- papers co-authored by relatives/ spouses
- Papers co-authored by parent and child teams
- most self-citing authors
- most cited female authors
- most cited retracted papers
- most cited journals
- most cited institutions
- most cited funders
- longest chain of citations
- most cited chain of citations
- highest number of author (P50)
- images of people who have authored instances of scientific articles
- author with largest network of co-authors
- research fields sorted by percentage of female first authors on papers within the field
- people who published a paper on every day of the calendar
- papers without English description
- common strings for authors of scientific articles
- author strings in cited papers
- list of items of authors (of Zika papers) who do not have a P2093 statement
- Wikidata items that have statements referenced to Wikidata items with a PMID (P698) or PMCID (P932)
- asked here
- Graph around Zika (needs more work)
- items with "virus" in their label but with no instance or subclass statements
- Co-author name strings and item labels of co-author items for a given author
- tag authors as such if they have no statement other than P31: Q5
- scholarly works simply marked as publications rather than scholarly articles
Languages edit
- Disease Ontology terms ranked by number of Wikidata languages in which they have a label
- Paper items without language tag but likely in English, judging based on the title
- Candidates for a lexeme challenge on ecology
Deprecated ORCIDs edit
- Deprecated ORCID statements
- modeled after this example query
Items created by a specific user edit
Methods edit
The following query uses these:
- Properties: title (P1476)
SELECT DISTINCT ?using ?N (COUNT(?item) AS ?count) WHERE { hint:Query hint:optimizer "None". { SERVICE wikibase:mwapi { bd:serviceParam wikibase:api "Search"; wikibase:endpoint "www.wikidata.org"; mwapi:srsearch "\"using\" and haswbstatement:P31=Q13442814 -haswbstatement:P4510". ?page_title wikibase:apiOutput mwapi:title. } } UNION { SERVICE wikibase:mwapi { bd:serviceParam wikibase:api "Search"; wikibase:endpoint "www.wikidata.org"; mwapi:srsearch "\"using\" -and haswbstatement:P31=Q13442814 -haswbstatement:P4510". ?page_title wikibase:apiOutput mwapi:title. } } BIND(IRI(CONCAT(STR(wd:), ?page_title)) AS ?item) ?item wdt:P1476 ?title. BIND(STRAFTER(LCASE(?title), "using ") AS ?using) BIND(STRLEN(REPLACE(?using, "\\S", "")) + 1 as ?N) } GROUP BY ?using ?N ?count ORDER BY DESC(?count)
Researchers edit
Add missing descriptions to researcher items edit
Overview of common descriptions for researchers in a given language edit
edit
- scientific articles
- PMID
- PMCID
- DOI
- main subject
- of which
- MeSH ID
- cites
- authors
- author name strings
- ORCID
- ISBN-13
Detailed lists edit
- The following query uses these:
- Properties: PMCID (P932)
SELECT DISTINCT ?pmcid WHERE { ?article wdt:P932 ?pmcid . } LIMIT 500000 OFFSET 3000000
Problematic items edit
- 10.1162/jmlr.2003.3.4-5.993 (Q55884722)
- Temperature-dependent Raman spectra of HoMn2O5 and TbMn2O5 (Q56002215)
- Nine new species of D imophora from Australia (Hymenoptera: Ichneumonidae): new insights on the distribution of a poorly known genus of parasitoid wasps
- Sex-biased parasitism of adult spring beetles,Heteronyx dimidiataandHeteronyx crinitus, by Tachinidae inEucalyptus nitensplantations in Australia
- In-dental office screening for diabetes mellitus using gingival crevicular blood: Retraction (Q43219180): You have been dumping retracted articles in without noticing that they have been retracted! This is acutally a faulty retraction notice that lists me (the whistleblower) as the author. There are many retractions listed in PubMed - why was this not flagged? This taints the citation information as well as lends credibility to the publication of a plagiarism. --WiseWoman (talk) 22:48, 14 January 2019 (UTC)
- https://author-disambiguator.toolforge.org/names_oauth.php?doit=Look+for+author&name=A%20Metin%20G%C3%BClmezoglu
- caused by this merge
Relevant WikiProjects edit
Recent edits edit
For latest edits, go to Special:Contributions/Research Bot or purge this page's cache. For overall edit stats, see here.
25 April 2024
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