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(Q29518468)
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English
LSM8 homolog, U6 small nuclear RNA associated
mammalian protein found in Rattus norvegicus
Lsm8
N-alpha-acetyltransferase 38, NatC auxiliary subunit
In more languages
edit
Statements
instance of
protein
1 reference
stated in
UniProt
retrieved
17 November 2021
UniProt protein ID
B2RZB6
part of
LSM domain superfamily
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/B2RZB6
LSM domain, eukaryotic/archaea-type, protein family
1 reference
based on heuristic
inferred from protein domain or family
Sm-like protein Lsm8 family
1 reference
based on heuristic
inferred from protein domain or family
found in taxon
brown rat
1 reference
stated in
UniProt
retrieved
17 November 2021
UniProt protein ID
B2RZB6
encoded by
Lsm8
1 reference
stated in
UniProt
retrieved
17 November 2021
UniProt protein ID
B2RZB6
molecular function
RNA binding
determination method
IBA
IEA
2 references
retrieved
14 February 2019
stated in
GOA
curator
UniProt
UniProt protein ID
B2RZB6
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:B2RZB6
determination method
IEA
retrieved
14 February 2019
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:B2RZB6
determination method
IBA
molecular function
determination method
ND
1 reference
retrieved
14 February 2019
stated in
GOA
curator
Rat genome database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:B2RZB6
determination method
ND
cell component
U4/U6 x U5 tri-snRNP complex
determination method
IBA
IEA
4 references
retrieved
14 February 2019
stated in
GOA
curator
UniProt
UniProt protein ID
B2RZB6
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:B2RZB6
determination method
IEA
retrieved
14 February 2019
stated in
GOA
curator
InterPro
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:B2RZB6
determination method
IEA
retrieved
14 February 2019
stated in
GOA
curator
Ensembl genome database project
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:B2RZB6
determination method
IEA
retrieved
14 February 2019
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:B2RZB6
determination method
IBA
U6 snRNP
determination method
IBA
IEA
3 references
retrieved
14 February 2019
stated in
GOA
curator
UniProt
UniProt protein ID
B2RZB6
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:B2RZB6
determination method
IEA
retrieved
14 February 2019
stated in
GOA
curator
InterPro
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:B2RZB6
determination method
IEA
retrieved
14 February 2019
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:B2RZB6
determination method
IBA
precatalytic spliceosome
determination method
IBA
1 reference
retrieved
16 September 2017
stated in
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=B2RZB6&geneProductId=UniProtKB:B2RZB6
determination method
IBA
cellular component
determination method
ND
1 reference
retrieved
14 February 2019
stated in
GOA
curator
Rat genome database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:B2RZB6
determination method
ND
nucleus
determination method
IEA
2 references
retrieved
14 February 2019
stated in
GOA
curator
UniProt
UniProt protein ID
B2RZB6
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:B2RZB6
determination method
IEA
retrieved
14 February 2019
stated in
GOA
curator
Ensembl genome database project
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:B2RZB6
determination method
IEA
spliceosomal complex
determination method
IEA
1 reference
retrieved
14 February 2019
stated in
GOA
curator
UniProt
UniProt protein ID
B2RZB6
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:B2RZB6
determination method
IEA
U2-type precatalytic spliceosome
determination method
IEA
1 reference
retrieved
14 February 2019
stated in
GOA
curator
Ensembl genome database project
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:B2RZB6
determination method
IEA
Lsm2-8 complex
determination method
IEA
1 reference
retrieved
14 February 2019
stated in
GOA
curator
Ensembl genome database project
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:B2RZB6
determination method
IEA
biological process
mRNA splicing, via spliceosome
determination method
IBA
IEA
4 references
retrieved
1 January 2018
stated in
GOA
curator
UniProt
UniProt protein ID
B2RZB6
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=B2RZB6&geneProductId=UniProtKB:B2RZB6
determination method
IEA
retrieved
1 January 2018
stated in
GOA
curator
InterPro
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=B2RZB6&geneProductId=UniProtKB:B2RZB6
determination method
IEA
retrieved
1 January 2018
stated in
GOA
curator
Ensembl genome database project
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=B2RZB6&geneProductId=UniProtKB:B2RZB6
determination method
IEA
retrieved
1 January 2018
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=B2RZB6&geneProductId=UniProtKB:B2RZB6
determination method
IBA
mRNA processing
determination method
IEA
1 reference
retrieved
14 February 2019
stated in
GOA
curator
UniProt
UniProt protein ID
B2RZB6
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:B2RZB6
determination method
IEA
biological process
determination method
ND
1 reference
retrieved
14 February 2019
stated in
GOA
curator
Rat genome database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:B2RZB6
determination method
ND
RNA splicing
determination method
IEA
1 reference
retrieved
14 February 2019
stated in
GOA
curator
UniProt
UniProt protein ID
B2RZB6
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:B2RZB6
determination method
IEA
RNA metabolic process
determination method
IBA
1 reference
retrieved
14 February 2019
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:B2RZB6
determination method
IBA
mRNA splicing, via spliceosome
determination method
IEA
3 references
retrieved
14 February 2019
stated in
GOA
curator
UniProt
UniProt protein ID
B2RZB6
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:B2RZB6
determination method
IEA
retrieved
14 February 2019
stated in
GOA
curator
InterPro
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:B2RZB6
determination method
IEA
retrieved
14 February 2019
stated in
GOA
curator
Ensembl genome database project
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:B2RZB6
determination method
IEA
has part(s)
LSM domain, eukaryotic/archaea-type
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/B2RZB6
Sm-like protein Lsm8
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/B2RZB6
Identifiers
RefSeq protein ID
NP_001100055
1 reference
stated in
NCBI Gene
retrieved
7 September 2021
Entrez Gene ID
296913
UniProt protein ID
B2RZB6
1 reference
stated in
UniProt
retrieved
17 November 2021
UniProt protein ID
B2RZB6
Ensembl protein ID
ENSRNOP00000073002
1 reference
stated in
ensembl Release 104
Ensembl protein ID
ENSRNOP00000073002
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