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SMG5 nonsense mediated mRNA decay factor
mammalian protein found in Rattus norvegicus
Smg5
protein SMG5
Smg-5 homolog, nonsense mediated mRNA decay factor
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Statements
instance of
protein
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
E9PU03
part of
Tetratricopeptide-like helical domain superfamily
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/E9PU03
DNA/RNA-binding domain, Est1-type, protein family
1 reference
based on heuristic
inferred from protein domain or family
PIN domain, protein family
1 reference
based on heuristic
inferred from protein domain or family
Telomerase activating protein Est1 family
1 reference
based on heuristic
inferred from protein domain or family
found in taxon
brown rat
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
E9PU03
encoded by
Smg5
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
E9PU03
molecular function
ribonuclease activity
determination method
IBA
1 reference
retrieved
10 September 2018
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=E9PU03&geneProductId=UniProtKB:E9PU03
determination method
IBA
ubiquitin protein ligase binding
determination method
IEA
1 reference
retrieved
14 February 2019
stated in
GOA
curator
Ensembl genome database project
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:E9PU03
determination method
IEA
telomeric DNA binding
determination method
IBA
IEA
2 references
retrieved
14 February 2019
stated in
GOA
curator
Ensembl genome database project
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:E9PU03
determination method
IEA
retrieved
14 February 2019
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:E9PU03
determination method
IBA
histone deacetylase binding
determination method
IEA
1 reference
retrieved
14 February 2019
stated in
GOA
curator
Ensembl genome database project
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:E9PU03
determination method
IEA
ribonucleoprotein complex binding
determination method
IBA
1 reference
retrieved
10 September 2018
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=E9PU03&geneProductId=UniProtKB:E9PU03
determination method
IBA
protein phosphatase 2A binding
determination method
IEA
1 reference
retrieved
14 February 2019
stated in
GOA
curator
Ensembl genome database project
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:E9PU03
determination method
IEA
telomerase RNA binding
determination method
IBA
IEA
2 references
retrieved
14 February 2019
stated in
GOA
curator
Ensembl genome database project
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:E9PU03
determination method
IEA
retrieved
14 February 2019
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:E9PU03
determination method
IBA
cell component
nucleus
determination method
IEA
1 reference
retrieved
14 February 2019
stated in
GOA
curator
Ensembl genome database project
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:E9PU03
determination method
IEA
telomerase holoenzyme complex
determination method
IBA
1 reference
retrieved
14 February 2019
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:E9PU03
determination method
IBA
cytoplasm
determination method
IBA
IEA
2 references
retrieved
14 February 2019
stated in
GOA
curator
Ensembl genome database project
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:E9PU03
determination method
IEA
retrieved
14 February 2019
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:E9PU03
determination method
IBA
biological process
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
determination method
IBA
1 reference
retrieved
10 September 2018
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=E9PU03&geneProductId=UniProtKB:E9PU03
determination method
IBA
mRNA export from nucleus
determination method
IBA
1 reference
retrieved
27 March 2018
stated in
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=E9PU03&geneProductId=UniProtKB:E9PU03
determination method
IBA
telomere maintenance via telomerase
determination method
IBA
1 reference
retrieved
14 February 2019
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:E9PU03
determination method
IBA
regulation of telomere maintenance
determination method
IEA
1 reference
retrieved
14 February 2019
stated in
GOA
curator
Ensembl genome database project
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:E9PU03
determination method
IEA
regulation of dephosphorylation
determination method
IEA
1 reference
retrieved
14 February 2019
stated in
GOA
curator
Ensembl genome database project
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:E9PU03
determination method
IEA
regulation of RNA stability
determination method
IBA
1 reference
retrieved
10 September 2018
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=E9PU03&geneProductId=UniProtKB:E9PU03
determination method
IBA
RNA phosphodiester bond hydrolysis
determination method
IEA
1 reference
retrieved
10 September 2018
stated in
GOA
curator
Gene Ontology Consortium
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=E9PU03&geneProductId=UniProtKB:E9PU03
determination method
IEA
regulation of telomere maintenance via telomerase
determination method
IBA
1 reference
retrieved
14 February 2019
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:E9PU03
determination method
IBA
has part(s)
Telomerase activating protein Est1
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/E9PU03
PIN domain
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/E9PU03
DNA/RNA-binding domain, Est1-type
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/E9PU03
Identifiers
RefSeq protein ID
XP_001059906
1 reference
stated in
NCBI Gene
retrieved
20 March 2022
Entrez Gene ID
681012
XP_038959679
1 reference
stated in
NCBI Gene
retrieved
20 March 2022
Entrez Gene ID
681012
XP_038959680
1 reference
stated in
NCBI Gene
retrieved
20 March 2022
Entrez Gene ID
681012
XP_038959681
1 reference
stated in
NCBI Gene
retrieved
20 March 2022
Entrez Gene ID
681012
XP_038959682
1 reference
stated in
NCBI Gene
retrieved
20 March 2022
Entrez Gene ID
681012
UniProt protein ID
E9PU03
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
E9PU03
Ensembl protein ID
ENSRNOP00000026514
1 reference
stated in
ensembl Release 106
Ensembl protein ID
ENSRNOP00000026514
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