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English
LIM domain family CELE_C04F1.3
protein found in Caenorhabditis elegans
lim-7
LIM domain family
In more languages
edit
Statements
instance of
protein
1 reference
stated in
UniProt
retrieved
5 December 2018
UniProt protein ID
G5EC36
part of
Homeobox-like domain superfamily
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/G5EC36
Homeobox domain, protein family
1 reference
based on heuristic
inferred from protein domain or family
Zinc finger, LIM-type, protein family
1 reference
based on heuristic
inferred from protein domain or family
Homeobox, conserved site, protein family
1 reference
based on heuristic
inferred from protein domain or family
found in taxon
Caenorhabditis elegans
1 reference
stated in
UniProt
retrieved
5 December 2018
UniProt protein ID
G5EC36
encoded by
lim-7
1 reference
stated in
UniProt
retrieved
5 December 2018
UniProt protein ID
G5EC36
molecular function
DNA binding
determination method
IEA
2 references
retrieved
1 January 2018
stated in
GOA
curator
UniProt
UniProt protein ID
G5EC36
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:G5EC36
determination method
IEA
retrieved
1 January 2018
stated in
GOA
curator
InterPro
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:G5EC36
determination method
IEA
protein binding
determination method
IPI
2 references
retrieved
1 January 2018
stated in
Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:G5EC36
determination method
IPI
retrieved
1 January 2018
stated in
Extensive rewiring and complex evolutionary dynamics in a C. elegans multiparameter transcription factor network
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:G5EC36
determination method
IPI
sequence-specific DNA binding
determination method
IEA
1 reference
retrieved
1 January 2018
stated in
GOA
curator
InterPro
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:G5EC36
determination method
IEA
metal ion binding
determination method
IEA
1 reference
retrieved
1 January 2018
stated in
GOA
curator
UniProt
UniProt protein ID
G5EC36
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:G5EC36
determination method
IEA
DNA-binding transcription factor activity, RNA polymerase II-specific
determination method
IBA
1 reference
retrieved
1 January 2018
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:G5EC36
determination method
IBA
cell component
nucleus
determination method
IDA
IEA
2 references
retrieved
16 July 2018
stated in
GOA
curator
UniProt
UniProt protein ID
G5EC36
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=G5EC36&geneProductId=UniProtKB:G5EC36
determination method
IEA
retrieved
16 July 2018
stated in
Characterization of the Caenorhabditis elegans Islet LIM-homeodomain ortholog, lim-7.
GOA
curator
WormBase
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=G5EC36&geneProductId=UniProtKB:G5EC36
determination method
IDA
nucleus
determination method
IBA
IDA
IEA
3 references
retrieved
1 January 2018
stated in
GOA
curator
UniProt
UniProt protein ID
G5EC36
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:G5EC36
determination method
IEA
retrieved
1 January 2018
stated in
Characterization of the Caenorhabditis elegans Islet LIM-homeodomain ortholog, lim-7.
GOA
curator
WormBase
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:G5EC36
determination method
IDA
retrieved
1 January 2018
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:G5EC36
determination method
IBA
biological process
nematode larval development
determination method
IMP
1 reference
retrieved
1 January 2018
stated in
Characterization of the Caenorhabditis elegans Islet LIM-homeodomain ortholog, lim-7.
GOA
curator
WormBase
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:G5EC36
determination method
IMP
regulation of transcription, DNA-templated
determination method
IEA
1 reference
retrieved
1 January 2018
stated in
GOA
curator
InterPro
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:G5EC36
determination method
IEA
excretion
determination method
IMP
1 reference
retrieved
1 January 2018
stated in
Characterization of the Caenorhabditis elegans Islet LIM-homeodomain ortholog, lim-7.
GOA
curator
WormBase
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:G5EC36
determination method
IMP
body morphogenesis
determination method
IMP
1 reference
retrieved
1 January 2018
stated in
Characterization of the Caenorhabditis elegans Islet LIM-homeodomain ortholog, lim-7.
GOA
curator
WormBase
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:G5EC36
determination method
IMP
gonad morphogenesis
determination method
IMP
1 reference
retrieved
1 January 2018
stated in
Characterization of the Caenorhabditis elegans Islet LIM-homeodomain ortholog, lim-7.
GOA
curator
WormBase
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:G5EC36
determination method
IMP
locomotion
determination method
IMP
1 reference
retrieved
1 January 2018
stated in
Characterization of the Caenorhabditis elegans Islet LIM-homeodomain ortholog, lim-7.
GOA
curator
WormBase
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:G5EC36
determination method
IMP
head morphogenesis
determination method
IMP
1 reference
retrieved
1 January 2018
stated in
Characterization of the Caenorhabditis elegans Islet LIM-homeodomain ortholog, lim-7.
GOA
curator
WormBase
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:G5EC36
determination method
IMP
pharynx development
determination method
IMP
1 reference
retrieved
1 January 2018
stated in
Characterization of the Caenorhabditis elegans Islet LIM-homeodomain ortholog, lim-7.
GOA
curator
WormBase
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:G5EC36
determination method
IMP
regulation of transcription by RNA polymerase II
determination method
IEA
1 reference
retrieved
1 January 2018
stated in
GOA
curator
Gene Ontology Consortium
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:G5EC36
determination method
IEA
axonogenesis
determination method
IBA
1 reference
retrieved
1 January 2018
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:G5EC36
determination method
IBA
neuron fate specification
determination method
IBA
1 reference
retrieved
1 January 2018
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:G5EC36
determination method
IBA
has part(s)
Homeobox, conserved site
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/G5EC36
Homeobox domain
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/G5EC36
Zinc finger, LIM-type
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/G5EC36
Identifiers
RefSeq protein ID
NP_491668
1 reference
stated in
NCBI Gene
retrieved
14 December 2018
Entrez Gene ID
172236
UniProt protein ID
G5EC36
1 reference
stated in
UniProt
retrieved
5 December 2018
UniProt protein ID
G5EC36
Ensembl protein ID
C04F1.3
1 reference
stated in
ensembl Release 96
Ensembl protein ID
C04F1.3
Sitelinks
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