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Probable small nuclear ribonucleoprotein F CELE_ZK652.1
protein found in Caenorhabditis elegans
Probable small nuclear ribonucleoprotein F
snr-5
In more languages
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Statements
instance of
protein
1 reference
stated in
UniProt
retrieved
5 December 2018
UniProt protein ID
P34659
part of
Small nuclear ribonucleoprotein F
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/P34659
LSM domain superfamily
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/P34659
LSM domain, eukaryotic/archaea-type, protein family
1 reference
based on heuristic
inferred from protein domain or family
found in taxon
Caenorhabditis elegans
1 reference
stated in
UniProt
retrieved
5 December 2018
UniProt protein ID
P34659
encoded by
snr-5
1 reference
stated in
UniProt
retrieved
5 December 2018
UniProt protein ID
P34659
molecular function
RNA binding
determination method
IBA
IEA
2 references
retrieved
8 April 2019
stated in
GOA
curator
UniProt
UniProt protein ID
P34659
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P34659
determination method
IEA
retrieved
8 April 2019
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P34659
determination method
IBA
protein binding
determination method
IPI
3 references
retrieved
8 April 2019
stated in
Identification of potential interaction networks using sequence-based searches for conserved protein-protein interactions or "interologs".
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P34659
determination method
IPI
retrieved
8 April 2019
stated in
Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P34659
determination method
IPI
retrieved
8 April 2019
stated in
A map of the interactome network of the metazoan C. elegans
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P34659
determination method
IPI
cell component
nucleus
determination method
IEA
1 reference
retrieved
8 April 2019
stated in
GOA
curator
UniProt
UniProt protein ID
P34659
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P34659
determination method
IEA
spliceosomal complex
determination method
IEA
2 references
retrieved
8 April 2019
stated in
GOA
curator
UniProt
UniProt protein ID
P34659
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P34659
determination method
IEA
retrieved
8 April 2019
stated in
GOA
curator
InterPro
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P34659
determination method
IEA
U1 snRNP
determination method
IBA
1 reference
retrieved
8 April 2019
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P34659
determination method
IBA
sno(s)RNA-containing ribonucleoprotein complex
determination method
IEA
1 reference
retrieved
8 April 2019
stated in
GOA
curator
InterPro
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P34659
determination method
IEA
catalytic step 2 spliceosome
determination method
IBA
1 reference
retrieved
8 April 2019
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P34659
determination method
IBA
biological process
spliceosomal snRNP assembly
determination method
IEA
1 reference
retrieved
8 April 2019
stated in
GOA
curator
InterPro
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P34659
determination method
IEA
mRNA splicing, via spliceosome
determination method
IBA
IEA
2 references
retrieved
10 September 2018
stated in
GOA
curator
InterPro
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=P34659&geneProductId=UniProtKB:P34659
determination method
IEA
retrieved
10 September 2018
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=P34659&geneProductId=UniProtKB:P34659
determination method
IBA
mRNA processing
determination method
IEA
1 reference
retrieved
8 April 2019
stated in
GOA
curator
UniProt
UniProt protein ID
P34659
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P34659
determination method
IEA
RNA splicing
determination method
IEA
1 reference
retrieved
8 April 2019
stated in
GOA
curator
UniProt
UniProt protein ID
P34659
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P34659
determination method
IEA
mRNA splicing, via spliceosome
determination method
IEA
1 reference
retrieved
8 April 2019
stated in
GOA
curator
InterPro
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P34659
determination method
IEA
has part(s)
LSM domain, eukaryotic/archaea-type
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/P34659
Identifiers
RefSeq protein ID
NP_498708
1 reference
stated in
NCBI Gene
retrieved
14 December 2018
Entrez Gene ID
176103
UniProt protein ID
P34659
1 reference
stated in
UniProt
retrieved
5 December 2018
UniProt protein ID
P34659
Ensembl protein ID
ZK652.1
1 reference
stated in
ensembl Release 96
Ensembl protein ID
ZK652.1
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