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(Q29808018)
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Hypothetical protein CELE_T20G5.11
protein found in Caenorhabditis elegans
rde-4
hypothetical protein
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No label defined
No description defined
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Statements
instance of
protein
1 reference
stated in
UniProt
retrieved
5 December 2018
UniProt protein ID
G5EBF5
part of
Double-stranded RNA-binding domain, protein family
1 reference
based on heuristic
inferred from protein domain or family
found in taxon
Caenorhabditis elegans
1 reference
stated in
UniProt
retrieved
5 December 2018
UniProt protein ID
G5EBF5
encoded by
rde-4
1 reference
stated in
UniProt
retrieved
5 December 2018
UniProt protein ID
G5EBF5
molecular function
RNA binding
determination method or standard
IEA
1 reference
retrieved
1 January 2018
stated in
GOA
curator
UniProt
UniProt protein ID
G5EBF5
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:G5EBF5
determination method or standard
IEA
double-stranded RNA binding
determination method or standard
IDA
3 references
retrieved
1 January 2018
stated in
RDE-4 preferentially binds long dsRNA and its dimerization is necessary for cleavage of dsRNA to siRNA.
GOA
curator
WormBase
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:G5EBF5
determination method or standard
IDA
retrieved
1 January 2018
stated in
The dsRNA binding protein RDE-4 interacts with RDE-1, DCR-1, and a DExH-box helicase to direct RNAi in C. elegans
GOA
curator
WormBase
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:G5EBF5
determination method or standard
IDA
retrieved
1 January 2018
stated in
Structure of RDE-4 dsRBDs and mutational studies provide insights into dsRNA recognition in the Caenorhabditis elegans RNAi pathway
GOA
curator
WormBase
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:G5EBF5
determination method or standard
IDA
single-stranded RNA binding
determination method or standard
IDA
1 reference
retrieved
1 January 2018
stated in
RDE-4 preferentially binds long dsRNA and its dimerization is necessary for cleavage of dsRNA to siRNA.
GOA
curator
WormBase
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:G5EBF5
determination method or standard
IDA
protein binding
determination method or standard
IPI
3 references
retrieved
1 January 2018
stated in
Shifted Transversal Design smart-pooling for high coverage interactome mapping
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:G5EBF5
determination method or standard
IPI
retrieved
1 January 2018
stated in
SH3 interactome conserves general function over specific form.
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:G5EBF5
determination method or standard
IPI
retrieved
1 January 2018
stated in
Tudor domain ERI-5 tethers an RNA-dependent RNA polymerase to DCR-1 to potentiate endo-RNAi
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:G5EBF5
determination method or standard
IPI
protein homodimerization activity
determination method or standard
IPI
1 reference
retrieved
1 January 2018
stated in
RDE-4 preferentially binds long dsRNA and its dimerization is necessary for cleavage of dsRNA to siRNA.
GOA
curator
WormBase
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:G5EBF5
determination method or standard
IPI
cell component
ribonucleoprotein complex
determination method or standard
IDA
1 reference
retrieved
1 January 2018
stated in
The dsRNA binding protein RDE-4 interacts with RDE-1, DCR-1, and a DExH-box helicase to direct RNAi in C. elegans
GOA
curator
WormBase
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:G5EBF5
determination method or standard
IDA
biological process
RNA interference
determination method or standard
IMP
1 reference
retrieved
1 January 2018
stated in
The rde-1 gene, RNA interference, and transposon silencing in C. elegans
GOA
curator
WormBase
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:G5EBF5
determination method or standard
IMP
production of siRNA involved in RNA interference
determination method or standard
IMP
3 references
retrieved
1 January 2018
stated in
In vitro analyses of the production and activity of secondary small interfering RNAs in C. elegans
GOA
curator
WormBase
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:G5EBF5
determination method or standard
IMP
retrieved
1 January 2018
stated in
Distinct roles for RDE-1 and RDE-4 during RNA interference in Caenorhabditis elegans
GOA
curator
WormBase
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:G5EBF5
determination method or standard
IMP
retrieved
1 January 2018
stated in
RDE-4 preferentially binds long dsRNA and its dimerization is necessary for cleavage of dsRNA to siRNA.
GOA
curator
WormBase
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:G5EBF5
determination method or standard
IMP
has part(s)
Double-stranded RNA-binding domain
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/G5EBF5
Identifiers
RefSeq protein ID
NP_499265
1 reference
stated in
NCBI Gene
retrieved
14 December 2018
Entrez Gene ID
176438
UniProt protein ID
G5EBF5
1 reference
stated in
UniProt
retrieved
5 December 2018
UniProt protein ID
G5EBF5
Ensembl protein ID
T20G5.11
1 reference
stated in
ensembl Release 96
Ensembl protein ID
T20G5.11
Sitelinks
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Multilingual sites
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