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(Q29833247)
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LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
Protein found in Danio rerio
LSM6 homolog, U6 small nuclear RNA associated
U6 snRNA-associated Sm-like protein LSm6
lsm6
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No label defined
No description defined
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Statements
instance of
protein
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
Q6IMW9
part of
LSM domain superfamily
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/Q6IMW9
Sm-like protein Lsm6/SmF
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/Q6IMW9
LSM domain, eukaryotic/archaea-type, protein family
1 reference
based on heuristic
inferred from protein domain or family
found in taxon
Danio rerio
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
Q6IMW9
encoded by
lsm6
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
Q6IMW9
molecular function
RNA binding
determination method
IBA
IEA
2 references
retrieved
27 March 2018
stated in
GOA
curator
UniProt
UniProt protein ID
Q6IMW9
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=Q6IMW9&geneProductId=UniProtKB:Q6IMW9
determination method
IEA
retrieved
27 March 2018
stated in
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=Q6IMW9&geneProductId=UniProtKB:Q6IMW9
determination method
IBA
RNA binding
determination method
IEA
1 reference
retrieved
8 April 2019
stated in
GOA
curator
UniProt
UniProt protein ID
Q6IMW9
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q6IMW9
determination method
IEA
cell component
P-body
determination method
IBA
1 reference
retrieved
8 April 2019
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q6IMW9
determination method
IBA
nucleus
determination method
IEA
1 reference
retrieved
8 April 2019
stated in
GOA
curator
UniProt
UniProt protein ID
Q6IMW9
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q6IMW9
determination method
IEA
spliceosomal complex
determination method
IEA
1 reference
retrieved
8 April 2019
stated in
GOA
curator
UniProt
UniProt protein ID
Q6IMW9
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q6IMW9
determination method
IEA
U6 snRNP
determination method
IBA
1 reference
retrieved
8 April 2019
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q6IMW9
determination method
IBA
nucleolus
determination method
IBA
1 reference
retrieved
8 April 2019
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q6IMW9
determination method
IBA
sno(s)RNA-containing ribonucleoprotein complex
determination method
IBA
IEA
2 references
retrieved
1 January 2018
stated in
GOA
curator
InterPro
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=Q6IMW9&geneProductId=UniProtKB:Q6IMW9
determination method
IEA
retrieved
1 January 2018
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=Q6IMW9&geneProductId=UniProtKB:Q6IMW9
determination method
IBA
U4/U6 x U5 tri-snRNP complex
determination method
IBA
1 reference
retrieved
8 April 2019
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q6IMW9
determination method
IBA
sno(s)RNA-containing ribonucleoprotein complex
determination method
IEA
1 reference
retrieved
8 April 2019
stated in
GOA
curator
InterPro
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q6IMW9
determination method
IEA
biological process
mRNA splicing, via spliceosome
determination method
IBA
IEA
2 references
retrieved
1 January 2018
stated in
GOA
curator
InterPro
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=Q6IMW9&geneProductId=UniProtKB:Q6IMW9
determination method
IEA
retrieved
1 January 2018
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=Q6IMW9&geneProductId=UniProtKB:Q6IMW9
determination method
IBA
mRNA processing
determination method
IEA
1 reference
retrieved
8 April 2019
stated in
GOA
curator
UniProt
UniProt protein ID
Q6IMW9
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q6IMW9
determination method
IEA
RNA splicing
determination method
IEA
1 reference
retrieved
8 April 2019
stated in
GOA
curator
UniProt
UniProt protein ID
Q6IMW9
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q6IMW9
determination method
IEA
maturation of SSU-rRNA
determination method
IBA
1 reference
retrieved
8 April 2019
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q6IMW9
determination method
IBA
mRNA splicing, via spliceosome
determination method
IEA
1 reference
retrieved
8 April 2019
stated in
GOA
curator
InterPro
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q6IMW9
determination method
IEA
has part(s)
LSM domain, eukaryotic/archaea-type
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/Q6IMW9
Identifiers
RefSeq protein ID
NP_001002077
1 reference
stated in
NCBI Gene
retrieved
20 March 2022
Entrez Gene ID
415167
XP_005160025
1 reference
stated in
NCBI Gene
retrieved
20 March 2022
Entrez Gene ID
415167
UniProt protein ID
Q6IMW9
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
Q6IMW9
Ensembl protein ID
ENSDARP00000119629
1 reference
stated in
ensembl Release 106
Ensembl protein ID
ENSDARP00000119629
ENSDARP00000053772
1 reference
stated in
ensembl Release 106
Ensembl protein ID
ENSDARP00000053772
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