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LSM1, U6 small nuclear RNA associated
Protein found in Danio rerio
lsm1
U6 snRNA-associated Sm-like protein LSm1
LSM1 homolog, U6 small nuclear RNA associated
In more languages
edit
Statements
instance of
protein
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
Q6DBW5
part of
LSM domain superfamily
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/Q6DBW5
Sm-like protein Lsm1 family
1 reference
based on heuristic
inferred from protein domain or family
LSM domain, eukaryotic/archaea-type, protein family
1 reference
based on heuristic
inferred from protein domain or family
found in taxon
Danio rerio
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
Q6DBW5
encoded by
lsm1
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
Q6DBW5
molecular function
RNA cap binding
determination method
IBA
1 reference
retrieved
10 September 2018
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=Q6DBW5&geneProductId=UniProtKB:Q6DBW5
determination method
IBA
RNA binding
determination method
IBA
1 reference
retrieved
10 September 2018
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=Q6DBW5&geneProductId=UniProtKB:Q6DBW5
determination method
IBA
RNA cap binding
determination method
IBA
IEA
2 references
retrieved
8 April 2019
stated in
GOA
curator
UniProt
UniProt protein ID
Q6DBW5
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q6DBW5
determination method
IEA
retrieved
8 April 2019
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q6DBW5
determination method
IBA
RNA binding
determination method
IBA
IEA
2 references
retrieved
8 April 2019
stated in
GOA
curator
UniProt
UniProt protein ID
Q6DBW5
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q6DBW5
determination method
IEA
retrieved
8 April 2019
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q6DBW5
determination method
IBA
cell component
P-body
determination method
IBA
1 reference
retrieved
10 September 2018
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=Q6DBW5&geneProductId=UniProtKB:Q6DBW5
determination method
IBA
mRNA cap binding complex
determination method
IBA
1 reference
retrieved
10 September 2018
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=Q6DBW5&geneProductId=UniProtKB:Q6DBW5
determination method
IBA
Lsm1-7-Pat1 complex
determination method
IBA
1 reference
retrieved
10 September 2018
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=Q6DBW5&geneProductId=UniProtKB:Q6DBW5
determination method
IBA
P-body
determination method
IBA
IEA
2 references
retrieved
8 April 2019
stated in
GOA
curator
UniProt
UniProt protein ID
Q6DBW5
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q6DBW5
determination method
IEA
retrieved
8 April 2019
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q6DBW5
determination method
IBA
cytoplasm
determination method
IEA
1 reference
retrieved
8 April 2019
stated in
GOA
curator
UniProt
UniProt protein ID
Q6DBW5
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q6DBW5
determination method
IEA
mRNA cap binding complex
determination method
IBA
IEA
2 references
retrieved
7 November 2018
stated in
GOA
curator
UniProt
UniProt protein ID
Q6DBW5
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=Q6DBW5&geneProductId=UniProtKB:Q6DBW5
determination method
IEA
retrieved
7 November 2018
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=Q6DBW5&geneProductId=UniProtKB:Q6DBW5
determination method
IBA
Lsm1-7-Pat1 complex
determination method
IBA
IEA
2 references
retrieved
8 April 2019
stated in
GOA
curator
UniProt
UniProt protein ID
Q6DBW5
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q6DBW5
determination method
IEA
retrieved
8 April 2019
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q6DBW5
determination method
IBA
biological process
deadenylation-dependent decapping of nuclear-transcribed mRNA
determination method
IBA
1 reference
retrieved
10 September 2018
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=Q6DBW5&geneProductId=UniProtKB:Q6DBW5
determination method
IBA
nuclear-transcribed mRNA catabolic process
determination method
IEA
1 reference
retrieved
8 April 2019
stated in
GOA
curator
InterPro
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q6DBW5
determination method
IEA
RNA metabolic process
determination method
IBA
1 reference
retrieved
8 April 2019
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q6DBW5
determination method
IBA
deadenylation-dependent decapping of nuclear-transcribed mRNA
determination method
IBA
IEA
2 references
retrieved
8 April 2019
stated in
GOA
curator
UniProt
UniProt protein ID
Q6DBW5
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q6DBW5
determination method
IEA
retrieved
8 April 2019
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q6DBW5
determination method
IBA
mRNA processing
determination method
IEA
1 reference
retrieved
8 April 2019
stated in
GOA
curator
UniProt
UniProt protein ID
Q6DBW5
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q6DBW5
determination method
IEA
has part(s)
Sm-like protein Lsm1
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/Q6DBW5
LSM domain, eukaryotic/archaea-type
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/Q6DBW5
Identifiers
RefSeq protein ID
NP_001003551
1 reference
stated in
NCBI Gene
retrieved
20 March 2022
Entrez Gene ID
445157
UniProt protein ID
Q6DBW5
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
Q6DBW5
Ensembl protein ID
ENSDARP00000063391
1 reference
stated in
ensembl Release 106
Ensembl protein ID
ENSDARP00000063391
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