Wikidata

(Q7388648)

English

SAMtools

set of software utilities for interacting with and post-processing short DNA sequence read alignments

In more languages

Statements

instance of
free software
0 references
readable file format
Sequence Alignment/Map
1 reference
reference URL
http://www.htslib.org/doc/#manual-pages
retrieved
1 February 2018
title
SAMtools Manual pages (English)
FASTA format
1 reference
reference URL
http://www.htslib.org/doc/#manual-pages
retrieved
1 February 2018
title
SAMtools Manual pages (English)
Variant Call Format
1 reference
reference URL
http://www.htslib.org/doc/#manual-pages
retrieved
1 February 2018
title
SAMtools Manual pages (English)
programmed in
C
1 reference
stated in
Open Hub
reference URL
https://www.openhub.net/p/samtools/analyses/latest/languages_summary
title
The samtools Open Source Project on Open Hub: Languages Page (English)
retrieved
19 July 2018
software version identifier
1.8
publication date
3 April 2018
1 reference
title
Release 1.8 (English)
retrieved
23 June 2018
reference URL
https://github.com/samtools/samtools/releases/tag/1.8
publication date
3 April 2018
1.7
publication date
26 January 2018
1 reference
title
Release 1.7 (English)
retrieved
23 June 2018
reference URL
https://github.com/samtools/samtools/releases/tag/1.7
publication date
26 January 2018
1.6
publication date
28 September 2017
1 reference
title
Release 1.6 (English)
retrieved
23 June 2018
reference URL
https://github.com/samtools/samtools/releases/tag/1.6
publication date
28 September 2017
1.5
publication date
21 June 2017
1 reference
title
Release 1.5 (English)
retrieved
23 June 2018
reference URL
https://github.com/samtools/samtools/releases/tag/1.5
publication date
21 June 2017
1.4.1
publication date
8 May 2017
1 reference
title
Release 1.4.1 (English)
retrieved
23 June 2018
reference URL
https://github.com/samtools/samtools/releases/tag/1.4.1
publication date
8 May 2017
1.4
publication date
13 March 2017
1 reference
title
Release 1.4 (English)
retrieved
23 June 2018
reference URL
https://github.com/samtools/samtools/releases/tag/1.4
publication date
13 March 2017
1.3.1
publication date
22 April 2016
1 reference
title
Release 1.3.1 (English)
retrieved
23 June 2018
reference URL
https://github.com/samtools/samtools/releases/tag/1.3.1
publication date
22 April 2016
1.3
publication date
15 December 2015
1 reference
title
Release 1.3 (English)
retrieved
23 June 2018
reference URL
https://github.com/samtools/samtools/releases/tag/1.3
publication date
15 December 2015
1.2
publication date
4 February 2015
1 reference
title
Release 1.2 (English)
retrieved
23 June 2018
reference URL
https://github.com/samtools/samtools/releases/tag/1.2
publication date
4 February 2015
1.9
publication date
18 July 2018
1 reference
reference URL
https://github.com/samtools/samtools/releases/tag/1.9
publication date
18 July 2018
title
Release 1.9 (English)
retrieved
23 July 2018
1.10
publication date
6 December 2019
1 reference
reference URL
https://github.com/samtools/samtools/releases/tag/1.10
retrieved
7 December 2019
title
Release 1.10 (English)
publication date
6 December 2019
1.11
publication date
22 September 2020
1 reference
reference URL
https://github.com/samtools/samtools/releases/tag/1.11
retrieved
16 October 2020
title
Release 1.11 (English)
publication date
22 September 2020
1.12
publication date
17 March 2021
1 reference
reference URL
https://github.com/samtools/samtools/releases/tag/1.12
retrieved
16 April 2021
title
Release 1.12 (English)
publication date
17 March 2021
1.13
publication date
9 July 2021
1 reference
reference URL
https://github.com/samtools/samtools/releases/tag/1.13
retrieved
26 October 2022
title
Release 1.13 (English)
publication date
9 July 2021
1.14
publication date
22 October 2021
1 reference
reference URL
https://github.com/samtools/samtools/releases/tag/1.14
retrieved
26 October 2022
title
Release 1.14 (English)
publication date
22 October 2021
1.15
publication date
21 February 2022
1 reference
reference URL
https://github.com/samtools/samtools/releases/tag/1.15
retrieved
26 October 2022
title
Release 1.15 (English)
publication date
21 February 2022
1.15.1
publication date
7 April 2022
1 reference
reference URL
https://github.com/samtools/samtools/releases/tag/1.15.1
retrieved
26 October 2022
title
Release 1.15.1 (English)
publication date
7 April 2022
1.16
publication date
18 August 2022
1 reference
reference URL
https://github.com/samtools/samtools/releases/tag/1.16
retrieved
26 October 2022
title
Release 1.16 (English)
publication date
18 August 2022
1.16.1
publication date
2 September 2022
1 reference
reference URL
https://github.com/samtools/samtools/releases/tag/1.16.1
retrieved
26 October 2022
title
Release 1.16.1 (English)
publication date
2 September 2022
1.17
publication date
21 February 2023
1 reference
reference URL
https://github.com/samtools/samtools/releases/tag/1.17
retrieved
23 February 2023
title
Release 1.17 (English)
publication date
21 February 2023
1.18
publication date
25 July 2023
1 reference
reference URL
https://github.com/samtools/samtools/releases/tag/1.18
retrieved
1 August 2023
title
Release 1.18 (English)
publication date
25 July 2023
1.19
publication date
12 December 2023
version type
stable version
1 reference
reference URL
https://github.com/samtools/samtools/releases/tag/1.19
retrieved
19 December 2023
title
Release 1.19 (English)
publication date
12 December 2023
1.19.1
publication date
22 January 2024
version type
stable version
1 reference
reference URL
https://github.com/samtools/samtools/releases/tag/1.19.1
retrieved
20 February 2024
title
Release 1.19.1 (English)
publication date
22 January 2024
1.19.2
publication date
24 January 2024
version type
stable version
1 reference
reference URL
https://github.com/samtools/samtools/releases/tag/1.19.2
retrieved
20 February 2024
title
Release 1.19.2 (English)
publication date
24 January 2024

Identifiers

AUR package
samtools
0 references
samtools-git
0 references
Freebase ID
/m/0hzq14h
0 references
Open Hub ID
samtools
0 references
openSUSE package
bcftools
0 references
 
edit
edit
    edit
      edit
        edit
          edit
            edit
              edit
                edit
                  Retrieved from "https://www.wikidata.org/w/index.php?title=Q7388648&oldid=2160268926"