(Q113580538)

English

Greengenes

database that providing chimera screening, standard alignment, and taxonomic classification using published taxonomies

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biological database

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official website

https://greengenes.lbl.gov/Download

language of work or name

1 reference

22 August 2022

described by source

Nucleic Acids Research (NAR) database

1 reference

https://www.oxfordjournals.org/nar/database/summary/878

Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB

1 reference

Applied and Environmental Microbiology

https://journals.asm.org/doi/10.1128/AEM.03006-05

22 August 2022

An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

1 reference

The ISME Journal

https://www.nature.com/articles/ismej2011139

22 August 2022

SILVA, RDP, Greengenes, NCBI and OTT - how do these taxonomies compare?

1 reference

https://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-017-3501-4

22 August 2022

Taxonomic annotation errors incorrectly assign the family Pseudoalteromonadaceae to the order Vibrionales in Greengenes: implications for microbial community assessments.

1 reference

https://peerj.com/articles/5248

22 August 2022

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