(Q21045407)

English

Random circular permutation leading to chain disruption within and near alpha helices in the catalytic chains of aspartate transcarbamoylase: effects on assembly, stability, and function

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scholarly article

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Random circular permutation leading to chain disruption within and near alpha helices in the catalytic chains of aspartate transcarbamoylase: effects on assembly, stability, and function (English)

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cyclic permutation

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author name string

P T Beernink

1

author given names

P T

author last names

Beernink

1 reference

PubMed publication ID

27 July 2022

Y R Yang

2

author given names

Y R

author last names

Yang

1 reference

PubMed publication ID

27 July 2022

R Graf

3

author given names

R

author last names

Graf

1 reference

PubMed publication ID

27 July 2022

D S King

4

author given names

D S

author last names

King

1 reference

PubMed publication ID

27 July 2022

S S Shah

5

author given names

S S

author last names

Shah

1 reference

PubMed publication ID

27 July 2022

H K Schachman

6

author given names

H K

author last names

Schachman

1 reference

PubMed publication ID

27 July 2022

language of work or name

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publication date

March 2001

0 references

Protein Science

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10

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3

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528-37

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In vivo formation of allosteric aspartate transcarbamoylase containing circularly permuted catalytic polypeptide chains: implications for protein folding and assembly

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374132

19 March 2017

Extent of N-terminal methionine excision from Escherichia coli proteins is governed by the side-chain length of the penultimate amino acid

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374132

19 March 2017

Circularly permuted beta-lactamase from Staphylococcus aureus PC1

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374132

19 March 2017

Native-like in vivo folding of a circularly permuted jellyroll protein shown by crystal structure analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374132

19 March 2017

The order of secondary structure elements does not determine the structure of a protein but does affect its folding kinetics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374132

19 March 2017

Complex of N-phosphonacetyl-L-aspartate with aspartate carbamoyltransferase. X-ray refinement, analysis of conformational changes and catalytic and allosteric mechanisms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374132

19 March 2017

Random circular permutation of DsbA reveals segments that are essential for protein folding and stability

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374132

12 September 2017

Folding of circular and permuted chymotrypsin inhibitor 2: retention of the folding nucleus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374132

12 September 2017

Thermodynamic and structural consequences of flexible loop deletion by circular permutation in the streptavidin-biotin system

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374132

12 September 2017

Circularly permuted dihydrofolate reductase possesses all the properties of the molten globule state, but can resume functional tertiary structure by interaction with its ligands.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374132

12 September 2017

Random circular permutation of genes and expressed polypeptide chains: application of the method to the catalytic chains of aspartate transcarbamoylase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374132

12 September 2017

Different folding transition states may result in the same native structure

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374132

12 September 2017

Aspartate transcarbamoylase containing circularly permuted catalytic polypeptide chains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374132

12 September 2017

Aspartate transcarbamylase from Escherichia coli: activity and regulation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374132

12 September 2017

Circular and circularly permuted forms of bovine pancreatic trypsin inhibitor

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374132

12 September 2017

Correct folding of circularly permuted variants of a beta alpha barrel enzyme in vivo

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374132

12 September 2017

Role of a carboxyl-terminal helix in the assembly, interchain interactions, and stability of aspartate transcarbamoylase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374132

12 September 2017

Escherichia coli aspartate carbamoyltransferase: the probing of crystal structure analysis via site-specific mutagenesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374132

12 September 2017

Allosteric regulation of aspartate transcarbamoylase. Changes in the sedimentation coefficient promoted by the bisubstrate analog N-(phosphonacetyl)-L-aspartate

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374132

27 September 2017

Subdomain interactions as a determinant in the folding and stability of T4 lysozyme

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374132

30 May 2018

Are turns required for the folding of ribonuclease T1?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374132

30 May 2018

Aspartate transcarbamylase. Interaction with the transition state analogue N-(phosphonacetyl)-L-aspartate

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374132

30 May 2018

Aspartate transcarbamylase. Stereospecific restrictions on the binding site for L-aspartate.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374132

30 May 2018

A fully active variant of dihydrofolate reductase with a circularly permuted sequence.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374132

30 May 2018

Three residues involved in binding and catalysis in the carbamyl phosphate binding site of Escherichia coli aspartate transcarbamylase.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374132

19 June 2018

Eye lens betaB2-crystallin: circular permutation does not influence the oligomerization state but enhances the conformational stability

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374132

29 November 2018

Influence of primary sequence transpositions on the folding pathways of ribonuclease T1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374132

29 November 2018

Circular permutations of protein sequence: not so rare?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374132

29 November 2018

Foldability of barnase mutants obtained by permutation of modules or secondary structure units

1 reference

https://pubmed.ncbi.nlm.nih.gov/11344321

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Circular permutation analysis as a method for distinction of functional elements in the M20 loop of Escherichia coli dihydrofolate reductase

1 reference

https://pubmed.ncbi.nlm.nih.gov/11344321

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Purification of Aspartate Transcarbamylase of Escherichia coli and Separation of Its Protein Subunits

1 reference

https://pubmed.ncbi.nlm.nih.gov/11344321

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Circular permutation of T4 lysozyme

1 reference

https://pubmed.ncbi.nlm.nih.gov/11344321

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1110/PS.39001

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PubMed publication ID

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ResearchGate publication ID

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