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Core promoter binding by histone-like TAF complexes
scientific article
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scholarly article
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title
Core promoter binding by histone-like TAF complexes
(English)
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main subject
cell biology
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TATA-box binding protein associated factor 6
1 reference
stated in
GOA release 2020-03-11
TATA-box binding protein associated factor 4b
1 reference
stated in
GOA release 2020-03-11
TATA-box binding protein associated factor 9
1 reference
stated in
GOA release 2020-03-11
TATA-box binding protein associated factor 12
1 reference
stated in
GOA release 2020-03-11
TATA-box binding protein associated factor 4
1 reference
stated in
GOA release 2020-03-11
DNA binding
1 reference
stated in
GOA release 2020-03-11
TBP-associated factor 4 Dmel_CG5444
1 reference
stated in
GOA release 2020-03-11
Taf4p YMR005W
1 reference
stated in
GOA release 2020-03-11
author name string
Hanshuang Shao
series ordinal
1
0 references
Merav Revach
series ordinal
2
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Sandra Moshonov
series ordinal
3
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Yael Tzuman
series ordinal
4
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Kfir Gazit
series ordinal
5
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Shira Albeck
series ordinal
6
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Tamar Unger
series ordinal
7
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Rivka Dikstein
series ordinal
8
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language of work or name
English
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publication date
January 2005
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published in
Molecular and Cellular Biology
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volume
25
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page(s)
206-19
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issue
1
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cites work
In vivo functional analysis of the histone 3-like TAF9 and a TAF9-related factor, TAF9L
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538770
retrieved
19 March 2017
Positive and negative TAF(II) functions that suggest a dynamic TFIID structure and elicit synergy with traps in activator-induced transcription
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538770
retrieved
19 March 2017
The human TFIID components TAF(II)135 and TAF(II)20 and the yeast SAGA components ADA1 and TAF(II)68 heterodimerize to form histone-like pairs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538770
retrieved
19 March 2017
DNA binding site selection by RNA polymerase II TAFs: a TAF(II)250-TAF(II)150 complex recognizes the initiator
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538770
retrieved
19 March 2017
Identification of TATA-binding protein-free TAFII-containing complex subunits suggests a role in nucleosome acetylation and signal transduction
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538770
retrieved
19 March 2017
A human SPT3-TAFII31-GCN5-L acetylase complex distinct from transcription factor IID
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538770
retrieved
19 March 2017
TAFII105 mediates activation of anti-apoptotic genes by NF-kappaB
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538770
retrieved
19 March 2017
Histone-like TAFs within the PCAF histone acetylase complex
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538770
retrieved
19 March 2017
Crystal structure of the nucleosome core particle at 2.8 A resolution
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538770
retrieved
19 March 2017
Crystal structure of a subcomplex of human transcription factor TFIID formed by TATA binding protein-associated factors hTAF4 (hTAF(II)135) and hTAF12 (hTAF(II)20)
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538770
retrieved
19 March 2017
Structural similarity between TAFs and the heterotetrameric core of the histone octamer
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538770
retrieved
19 March 2017
Identification of two novel TAF subunits of the yeast Saccharomyces cerevisiae TFIID complex
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538770
retrieved
19 March 2017
A subset of TAF(II)s are integral components of the SAGA complex required for nucleosome acetylation and transcriptional stimulation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538770
retrieved
19 March 2017
Functional analysis of the TFIID-specific yeast TAF4 (yTAF(II)48) reveals an unexpected organization of its histone-fold domain
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538770
retrieved
19 March 2017
A histone octamer-like structure within TFIID
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538770
retrieved
19 March 2017
Requirement of tissue-selective TBP-associated factor TAFII105 in ovarian development
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538770
retrieved
19 March 2017
Core promoter elements and TAFs contribute to the diversity of transcriptional activation in vertebrates
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538770
retrieved
27 September 2017
Mechanism of rapid transcriptional induction of tumor necrosis factor alpha-responsive genes by NF-kappaB.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538770
retrieved
27 September 2017
Mapping histone fold TAFs within yeast TFIID.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538770
retrieved
27 September 2017
Enhancer-promoter specificity mediated by DPE or TATA core promoter motifs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538770
retrieved
27 September 2017
The histone fold is a key structural motif of transcription factor TFIID.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538770
retrieved
27 September 2017
Specific interaction of TAFII105 with OCA-B is involved in activation of octamer-dependent transcription
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538770
retrieved
27 September 2017
TAFs revisited: more data reveal new twists and confirm old ideas
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538770
retrieved
27 September 2017
The downstream core promoter element, DPE, is conserved from Drosophila to humans and is recognized by TAFII60 of Drosophila
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538770
retrieved
27 September 2017
Considerations of transcriptional control mechanisms: do TFIID-core promoter complexes recapitulate nucleosome-like functions?
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538770
retrieved
27 September 2017
Human TAFII 105 is a cell type-specific TFIID subunit related to hTAFII130.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538770
retrieved
27 September 2017
Transcription factor TFIID recognizes DNA sequences downstream of the TATA element in the Hsp70 heat shock gene
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538770
retrieved
27 September 2017
Direct recognition of initiator elements by a component of the transcription factor IID complex
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538770
retrieved
27 September 2017
Binding of TAFs to core elements directs promoter selectivity by RNA polymerase II.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538770
retrieved
27 September 2017
A histone fold TAF octamer within the yeast TFIID transcriptional coactivator
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538770
retrieved
30 May 2018
TFIID sequence recognition of the initiator and sequences farther downstream in Drosophila class II genes.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538770
retrieved
30 May 2018
A downstream initiation element required for efficient TATA box binding and in vitro function of TFIID.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538770
retrieved
30 May 2018
Interaction of a gene-specific transcription factor with the adenovirus major late promoter upstream of the TATA box region.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538770
retrieved
19 June 2018
A Drosophila Polycomb group complex includes Zeste and dTAFII proteins.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538770
retrieved
29 November 2018
General transcription factors bind promoters repressed by Polycomb group proteins.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538770
retrieved
29 November 2018
Drosophila TAFII150: similarity to yeast gene TSM-1 and specific binding to core promoter DNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538770
retrieved
29 November 2018
Enhanced apoptosis of B and T lymphocytes in TAFII105 dominant-negative transgenic mice is linked to nuclear factor-kappa B
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/15601843
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Initiator sequences direct downstream promoter binding by human transcription factor IID
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/15601843
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Topology and reorganization of a human TFIID–promoter complex
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/15601843
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1128/MCB.25.1.206-219.2005
0 references
Fatcat ID
release_aeb7cnnrxzaajjvzdmk7tn26ua
1 reference
stated in
Fatcat
reference URL
https://api.fatcat.wiki/v0/release/aeb7cnnrxzaajjvzdmk7tn26ua
retrieved
24 November 2022
based on heuristic
mapped directly with Wikidata item
PMCID
538770
0 references
PubMed ID
15601843
0 references
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