(Q24533313)

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Crystal structure of aspartyl-tRNA synthetase from Pyrococcus kodakaraensis KOD: archaeon specificity and catalytic mechanism of adenylate formation

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Europe PubMed Central

PubMed publication ID

4 July 2017

Crystal structure of aspartyl-tRNA synthetase from Pyrococcus kodakaraensis KOD: archaeon specificity and catalytic mechanism of adenylate formation (English)

1 reference

Europe PubMed Central

PubMed publication ID

4 July 2017

crystal structure

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author name string

Schmitt E

1

1 reference

Europe PubMed Central

PubMed publication ID

4 July 2017

Moulinier L

2

1 reference

Europe PubMed Central

PubMed publication ID

4 July 2017

Fujiwara S

3

1 reference

Europe PubMed Central

PubMed publication ID

4 July 2017

Imanaka T

4

1 reference

Europe PubMed Central

PubMed publication ID

4 July 2017

Thierry JC

5

1 reference

Europe PubMed Central

PubMed publication ID

4 July 2017

Moras D

6

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4 July 2017

language of work or name

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publication date

1 September 1998

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Europe PubMed Central

PubMed publication ID

4 July 2017

The EMBO Journal

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Europe PubMed Central

PubMed publication ID

4 July 2017

17

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Europe PubMed Central

PubMed publication ID

4 July 2017

17

1 reference

Europe PubMed Central

PubMed publication ID

4 July 2017

5227-5237

1 reference

Europe PubMed Central

PubMed publication ID

4 July 2017

Extent of N-terminal methionine excision from Escherichia coli proteins is governed by the side-chain length of the penultimate amino acid

1 reference

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24 March 2017

The first step of aminoacylation at the atomic level in histidyl-tRNA synthetase

1 reference

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24 March 2017

The active site of yeast aspartyl-tRNA synthetase: structural and functional aspects of the aminoacylation reaction

1 reference

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24 March 2017

Crystal structures at 2.5 angstrom resolution of seryl-tRNA synthetase complexed with two analogs of seryl adenylate

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170850

24 March 2017

Synthesis and recognition of aspartyl-adenylate by Thermus thermophilus aspartyl-tRNA synthetase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170850

24 March 2017

The crystal structure of the lysyl-tRNA synthetase (LysU) from Escherichia coli

1 reference

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24 March 2017

Crystal structure of glycyl-tRNA synthetase from Thermus thermophilus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170850

24 March 2017

Class II aminoacyl transfer RNA synthetases: crystal structure of yeast aspartyl-tRNA synthetase complexed with tRNA(Asp)

1 reference

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Crystallographic R factor refinement by molecular dynamics

1 reference

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24 March 2017

SETOR: hardware-lighted three-dimensional solid model representations of macromolecules

1 reference

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24 March 2017

Improved methods for building protein models in electron density maps and the location of errors in these models

1 reference

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24 March 2017

Partition of tRNA synthetases into two classes based on mutually exclusive sets of sequence motifs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170850

7 April 2017

Ancient ciphers: translation in Archaea

1 reference

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27 September 2017

Archaeal genomics: an overview

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170850

27 September 2017

The crystal structures of T. thermophilus lysyl-tRNA synthetase complexed with E. coli tRNA(Lys) and a T. thermophilus tRNA(Lys) transcript: anticodon recognition and conformational changes upon binding of a lysyl-adenylate analogue

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170850

27 September 2017

At the core of the Archaea

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170850

27 September 2017

The aminoacyl-tRNA synthetase family: modules at work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170850

27 September 2017

Crystal structure of a prokaryotic aspartyl tRNA-synthetase.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170850

27 September 2017

The amino acid activation reaction catalyzed by methionyl-transfer RNA synthetase: Evidence for synergistic coupling between the sites for methionine adenosine and pyrophosphate

1 reference

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Catalytic mechanism of amino acid:tRNA ligases. Synergism and formation of the ternary enzyme-amino acid-ATP complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170850

27 September 2017

Structural and functional considerations of the aminoacylation reaction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170850

30 May 2018

Specific amino acid recognition by aspartyl-tRNA synthetase studied by free energy simulations 1 1A. R. Fersht

1 reference

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29 November 2018

Crystallization and preliminary X-ray analysis of Escherichia coli methionyl-tRNA(fMet) formyltransferase.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170850

29 November 2018

Sequence, overproduction and crystallization of aspartyl-tRNA synthetase from Thermus thermophilus. Implications for the structure of prokaryotic aspartyl-tRNA synthetases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170850

29 November 2018

Aspartyl-tRNA synthetase of the hyperthermophilic archaeon Pyrococcus sp. KOD 1 has a chimerical structure of eukaryotic and bacterial enzymes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170850

29 November 2018

Identity elements for specific aminoacylation of yeast tRNA(Asp) by cognate aspartyl-tRNA synthetase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170850

29 November 2018

tRNA-dependent asparagine formation

1 reference

https://pubmed.ncbi.nlm.nih.gov/9724658

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Yeast tRNAAsp recognition by its cognate class II aminoacyl-tRNA synthetase

1 reference

https://pubmed.ncbi.nlm.nih.gov/9724658

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The structural basis for seryl-adenylate and Ap4A synthesis by seryl-tRNA synthetase

1 reference

https://pubmed.ncbi.nlm.nih.gov/9724658

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Unusual enzyme characteristics of aspartyl-tRNA synthetase from hyperthermophilic archaeon Pyrococcus sp. KOD1

1 reference

https://pubmed.ncbi.nlm.nih.gov/9724658

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A high resolution diffracting crystal form of the complex between yeast tRNAAsp and aspartyl-tRNA synthetase

1 reference

https://pubmed.ncbi.nlm.nih.gov/9724658

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/EMBOJ/17.17.5227

1 reference

Europe PubMed Central

PubMed publication ID

4 July 2017

PMC publication ID

0 references

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

4 July 2017

ResearchGate publication ID

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