(Q24555229)

PubMed publication ID

11557807

Structure and function of type II restriction endonucleases

29 November 2023

language of work or name

English

0 references

publication date

15 September 2001

0 references

published in

Nucleic Acids Research

0 references

volume

29

0 references

issue

18

0 references

page(s)

3742-56

0 references

cites work

1 reference

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24 March 2017

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Evidence for horizontal transfer of SsuDAT1I restriction-modification genes to the Streptococcus suis genome

24 March 2017

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24 March 2017

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Regulation of endonuclease activity by proteolysis prevents breakage of unmodified bacterial chromosomes by type I restriction enzymes

24 March 2017

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Biology of DNA restriction

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Prokaryotic introns and inteins: a panoply of form and function

24 March 2017

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Characterization of the cloned BamHI restriction modification system: its nucleotide sequence, properties of the methylase, and expression in heterologous hosts

24 March 2017

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24 March 2017

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24 March 2017

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The complete genome sequence of the gastric pathogen Helicobacter pylori

24 March 2017

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Unexpected structural diversity in DNA recombination: the restriction endonuclease connection

24 March 2017

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Crystal structure of NaeI--an evolutionary bridge between DNA endonuclease and topoisomerase

24 March 2017

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Understanding the immutability of restriction enzymes: crystal structure of BglII and its DNA substrate at 1.5 A resolution

24 March 2017

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Recognition of a TG mismatch: the crystal structure of very short patch repair endonuclease in complex with a DNA duplex

24 March 2017

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Structure of the multimodular endonuclease FokI bound to DNA

24 March 2017

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Whole-genome random sequencing and assembly of Haemophilus influenzae Rd

24 March 2017

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Whole genome sequencing of meticillin-resistant Staphylococcus aureus

24 March 2017

1 reference

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Initiation of genetic recombination and recombination-dependent replication

24 March 2017

1 reference

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Complete Genome Sequence of Neisseria meningitidis Serogroup B Strain MC58

24 March 2017

1 reference

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Selfish operons: the evolutionary impact of gene clustering in prokaryotes and eukaryotes

24 March 2017

1 reference

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Antisense RNA-regulated programmed cell death

24 March 2017

1 reference

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AdoMet-dependent methylation, DNA methyltransferases and base flipping

24 March 2017

1 reference

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The structural basis of damaged DNA recognition and endonucleolytic cleavage for very short patch repair endonuclease

27 September 2017

1 reference

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Comparative genomics of the restriction-modification systems in Helicobacter pylori

27 September 2017

1 reference

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NmeSI restriction-modification system identified by representational difference analysis of a hypervirulent Neisseria meningitidis strain

27 September 2017

1 reference

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Hjc resolvase is a distantly related member of the type II restriction endonuclease family

27 September 2017

1 reference

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DNA methylation at the CfrBI site is involved in expression control in the CfrBI restriction-modification system

27 September 2017

1 reference

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SURVEY AND SUMMARY: holliday junction resolvases and related nucleases: identification of new families, phyletic distribution and evolutionary trajectories

27 September 2017

1 reference

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Re-annotating the Mycoplasma pneumoniae genome sequence: adding value, function and reading frames.

27 September 2017

1 reference

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Functional analysis of putative restriction-modification system genes in the Helicobacter pylori J99 genome

27 September 2017

1 reference

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Identification of type II restriction and modification systems in Helicobacter pylori reveals their substantial diversity among strains

27 September 2017

1 reference

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Cellular responses to postsegregational killing by restriction-modification genes

27 September 2017

1 reference

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ATP-dependent restriction enzymes

27 September 2017

1 reference

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DNA uptake signal sequences in naturally transformable bacteria

27 September 2017

1 reference

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Differential distribution of novel restriction-modification systems in clonal lineages of Neisseria meningitidis

27 September 2017

1 reference

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27 September 2017

1 reference

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27 September 2017

1 reference

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Evidence of horizontal transfer of the EcoO109I restriction-modification gene to Escherichia coli chromosomal DNA.

27 September 2017

1 reference

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DNA nicks inflicted by restriction endonucleases are repaired by a RecA- and RecB-dependent pathway in Escherichia coli

27 September 2017

1 reference

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27 September 2017

1 reference

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Protein antibiotics and their inhibitors.

27 September 2017

1 reference

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27 September 2017

1 reference

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27 September 2017

1 reference

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27 September 2017

1 reference

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27 September 2017

1 reference

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27 September 2017

1 reference

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1 reference

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27 September 2017

1 reference

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DNA strand invasion promoted by Escherichia coli RecT protein

27 September 2017

1 reference

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Structural basis for MutH activation in E.coli mismatch repair and relationship of MutH to restriction endonucleases

27 September 2017

1 reference

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27 September 2017

1 reference

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The restriction-modification genes of Escherichia coli K-12 may not be selfish: they do not resist loss and are readily replaced by alleles conferring different specificities

27 September 2017

1 reference

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27 September 2017

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27 September 2017

1 reference

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27 September 2017

1 reference

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27 September 2017

1 reference

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Horizontal gene transfer contributes to the wide distribution and evolution of type II restriction-modification systems

27 September 2017

1 reference

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27 September 2017

1 reference

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Delayed expression of in vivo restriction activity following conjugal transfer of Escherichia coli hsdK (restriction-modification) genes

27 September 2017

1 reference

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27 September 2017

1 reference

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Selfish behavior of restriction-modification systems

27 September 2017

1 reference

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Programmed cell death in bacterial populations

27 September 2017

1 reference

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DNA restriction-modification systems mediate plasmid maintenance

27 September 2017

1 reference

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Transduction, restriction and recombination patterns in Escherichia coli

27 September 2017

1 reference

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27 September 2017

1 reference

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27 September 2017

1 reference

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27 September 2017

1 reference

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27 September 2017

1 reference

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27 September 2017

1 reference

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27 September 2017

1 reference

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27 September 2017

1 reference

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Repair of the Escherichia coli chromosome after in vivo scission by the EcoRI endonuclease

27 September 2017

1 reference

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Evidence for the double-strand break repair model of bacteriophage lambda recombination.

27 September 2017

1 reference

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A family of regulatory genes associated with type II restriction-modification systems

27 September 2017

1 reference

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Population genetics of microbial organisms

27 September 2017

1 reference

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Statistical analyses of counts and distributions of restriction sites in DNA sequences

27 September 2017

1 reference

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Avoidance of palindromic words in bacterial and archaeal genomes: a close connection with restriction enzymes

27 September 2017

1 reference

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A novel, 11 nucleotide variant of chi, chi*: one of a class of sequences defining the Escherichia coli recombination hotspot chi.

27 September 2017

1 reference

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Detecting alien genes in bacterial genomes

30 May 2018

1 reference

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Selfishness and death: raison d'être of restriction, recombination and mitochondria

30 May 2018

1 reference

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Simple sequence repeats in the Helicobacter pylori genome

30 May 2018

1 reference

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A ColE1-type plasmid from Salmonella enteritidis encodes a DNA cytosine methyltransferase

30 May 2018

1 reference

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A transposon-like sequence adjacent to the AccI restriction-modification operon

30 May 2018

1 reference

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Gene pvuIIW: A possible modulator of PvuII endonuclease subunit association

30 May 2018

1 reference

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Restriction and modification systems of Neisseria gonorrhoeae.

30 May 2018

1 reference

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30 May 2018

1 reference

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Genetic basis of the complementary DpnI and DpnII restriction systems of S. pneumoniae: an intercellular cassette mechanism

30 May 2018

1 reference

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Basis for changes in DNA recognition by the EcoR124 and EcoR124/3 type I DNA restriction and modification enzymes

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55917

Chi-star, a chi-related 11-mer sequence partially active in an E. coli recC1004 strain.

30 May 2018

1 reference

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Diversity of restriction-modification gene homologues in Helicobacter pylori.

30 May 2018

1 reference

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Phylogeny of the restriction endonuclease-like superfamily inferred from comparison of protein structures

28 November 2018

1 reference

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Evolutionary instability of operon structures disclosed by sequence comparisons of complete microbial genomes.

28 November 2018

1 reference

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Truncated RanGAP encoded by the Segregation Distorter locus of Drosophila

28 November 2018

1 reference

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Comparative DNA analysis across diverse genomes.

28 November 2018

1 reference

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28 November 2018

1 reference

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28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55917

Combinational variation of restriction modification specificities in Lactococcus lactis

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55917

Control of expression of LlaI restriction in Lactococcus lactis

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55917

Regulation of the activity of the type IC EcoR124I restriction enzyme

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55917

Posttranscriptional regulation of EcoP1I and EcoP15I restriction activity

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55917

Identification of a gene encoding a DNA invertase-like enzyme adjacent to the PaeR7I restriction-modification system.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55917

Purification and characterization of C·BamHI, a regulator of the BamHI restriction-modification system

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55917

Organization and sequence of the HpaII restriction-modification system and adjacent genes

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55917

Recombination in phage lambda: one geneticist's historical perspective

28 November 2018

1 reference

12 December 2020

Evolution of sequence recognition by restriction-modification enzymes: selective pressure for specificity decrease

1 reference

12 December 2020

Insertion with long target duplication: a mechanism for gene mobility suggested from comparison of two related bacterial genomes

1 reference

12 December 2020

Comparison between Pyrococcus horikoshii and Pyrococcus abyssi genome sequences reveals linkage of restriction-modification genes with large genome polymorphisms

1 reference

12 December 2020

Molecular phylogenetics of DNA 5mC-methyltransferases

1 reference

12 December 2020

Evolutionary role of restriction/modification systems as revealed by comparative genome analysis

1 reference

12 December 2020

Experimental genome evolution: large-scale genome rearrangements associated with resistance to replacement of a chromosomal restriction-modification gene complex

1 reference

12 December 2020

A restriction endonuclease analysis of the bacterial plasmid controlling the ecoRI restriction and modification of DNA

1 reference

12 December 2020

Complex transcription of an operon encoding the Sail restriction-modification system of Streptomyces albus G

1 reference

12 December 2020

Evolution of prokaryotic genomes

1 reference

12 December 2020

Cloning and expression of the NaeI restriction endonuclease-encoding gene and sequence analysis of the NaeI restriction-modification system

1 reference

12 December 2020

Post-segregational killing by restriction modification gene complexes: observations of individual cell deaths

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/29.18.3742

1 reference

release_bqiidml7jjenfoev3x3kmoo45a

Fatcat ID

0 references

1 reference

1 reference

PubMed publication ID

11557807

1 reference