(Q24652372)

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Nucleosomes, linker DNA, and linker histone form a unique structural motif that directs the higher-order folding and compaction of chromatin

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6 December 2019

Nucleosomes, linker DNA, and linker histone form a unique structural motif that directs the higher-order folding and compaction of chromatin (English)

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6 December 2019

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6 December 2019

Abraham J Koster

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6 December 2019

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R A Horowitz

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6 December 2019

S A Grigoryev

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6 December 2019

L M Carruthers

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6 December 2019

J C Hansen

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6 December 2019

C L Woodcock

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6 December 2019

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1 November 1998

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6 December 2019

Proceedings of the National Academy of Sciences of the United States of America

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6 December 2019

95

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6 December 2019

14173-14178

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6 December 2019

24

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6 December 2019

A topological approach to nucleosome structure and dynamics: the linking number paradox and other issues

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

7 April 2017

Linking numbers and nucleosomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

7 April 2017

Involvement of histone H1 in the organization of the nucleosome and of the salt-dependent superstructures of chromatin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

7 April 2017

Crystal structure of the nucleosome core particle at 2.8 A resolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

7 April 2017

Cryo-electron microscopy of vitrified specimens

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

7 April 2017

Chromatin fiber structure: morphology, molecular determinants, structural transitions.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

28 September 2017

Automated electron microscope tomography of frozen-hydrated chromatin: the irregular three-dimensional zigzag architecture persists in compact, isolated fibers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

28 September 2017

The nucleosomal array: structure/function relationships

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

28 September 2017

Repression and activation by multiprotein complexes that alter chromatin structure

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

28 September 2017

Chromatin conformation and salt-induced compaction: three-dimensional structural information from cryoelectron microscopy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

28 September 2017

Multiple functions of nucleosomes and regulatory factors in transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

28 September 2017

A chromatin folding model that incorporates linker variability generates fibers resembling the native structures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

28 September 2017

Topography of the histone octamer surface: repeating structural motifs utilized in the docking of nucleosomal DNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

28 September 2017

Transcription: in tune with the histones

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

28 September 2017

The three-dimensional architecture of chromatin in situ: electron tomography reveals fibers composed of a continuously variable zig-zag nucleosomal ribbon

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

28 September 2017

Electron cryo-microscopy of vitrified biological specimens: towards high spatial and temporal resolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

28 September 2017

Nucleosome positioning and modification: chromatin structures that potentiate transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

28 September 2017

The transcription of chromatin templates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

28 September 2017

Role of chromatin structure in the regulation of transcription by RNA polymerase II.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

28 September 2017

Three-dimensional structure of extended chromatin fibers as revealed by tapping-mode scanning force microscopy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

28 September 2017

Linker histones H1 and H5 prevent the mobility of positioned nucleosomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

28 September 2017

Position effect variegation in Drosophila is associated with an altered chromatin structure.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

28 September 2017

Deposition of histone H1 onto reconstituted nucleosome arrays inhibits both initiation and elongation of transcripts by T7 RNA polymerase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

28 September 2017

Chromatin higher order structure: chasing a mirage?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

28 September 2017

Histones H1 and H5: one or two molecules per nucleosome?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

28 September 2017

Participation of core histone "tails" in the stabilization of the chromatin solenoid

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

28 September 2017

Involvement of the globular domain of histone H1 in the higher order structures of chromatin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

28 September 2017

The higher-order structure of chromatin: evidence for a helical ribbon arrangement

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

28 September 2017

The superstructure of chromatin and its condensation mechanism. II. Theoretical analysis of the X-ray scattering patterns and model calculations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

28 September 2017

Chromatin fibers are left-handed double helices with diameter and mass per unit length that depend on linker length.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

28 September 2017

Chromatin higher-order structure studied by neutron scattering and scanning transmission electron microscopy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

28 September 2017

Chromatin reconstituted from tandemly repeated cloned DNA fragments and core histones: a model system for study of higher order structure

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

28 September 2017

Assembly and propagation of repressed and depressed chromosomal states

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

28 September 2017

Toward a unified model of chromatin folding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

28 September 2017

Histone acetylation and control of gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

28 September 2017

A relationship between the helical twist of DNA and the ordered positioning of nucleosomes in all eukaryotic cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

28 September 2017

Chromatin as an essential part of the transcriptional mechanim

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

28 September 2017

Automated microscopy for electron tomography

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

28 September 2017

Biochemical and Ultrastructural Analysis of SV40 Chromatin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

28 September 2017

Folding of the DNA double helix in chromatin-like structures from simian virus 40

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

28 September 2017

What do linker histones do in chromatin?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

28 September 2017

Where is the globular domain of linker histone located on the nucleosome?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

28 September 2017

Electron microscopy of chromatin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

30 May 2018

Linker histone-dependent DNA structure in linear mononucleosomes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

30 May 2018

A defined structure of the 30 nm chromatin fibre which accommodates different nucleosomal repeat lengths

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

30 May 2018

Electrostatic mechanism of chromatin folding.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

30 May 2018

Chromatosome positioning on assembled long chromatin. Linker histones affect nucleosome placement on 5 S rDNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

30 May 2018

Histone H1 is located in the interior of the chromatin 30-nm filament.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

30 May 2018

Reinterpretation of Linear Dichroism of Chromatin Supports a Perpendicular Linker Orientation in the Folded State

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24346

28 November 2018

The omnipotent nucleosome

1 reference

https://pubmed.ncbi.nlm.nih.gov/9826673

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Formation and stability of higher order chromatin structures. Contributions of the histone octamer

1 reference

https://pubmed.ncbi.nlm.nih.gov/9826673

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Homogeneous reconstituted oligonucleosomes, evidence for salt-dependent folding in the absence of histone H1

1 reference

https://pubmed.ncbi.nlm.nih.gov/9826673

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Quantitative analysis of macromolecular conformational changes using agarose gel electrophoresis: application to chromatin folding

1 reference

https://pubmed.ncbi.nlm.nih.gov/9826673

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chromatin organization re-viewed

1 reference

https://pubmed.ncbi.nlm.nih.gov/9826673

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Hybrid trypsinized nucleosomal arrays: identification of multiple functional roles of the H2A/H2B and H3/H4 N-termini in chromatin fiber compaction

1 reference

https://pubmed.ncbi.nlm.nih.gov/9826673

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Roles of H1 domains in determining higher order chromatin structure and H1 location

1 reference

https://pubmed.ncbi.nlm.nih.gov/9826673

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Determination of the DNA helical repeat by cryo-electron microscopy

1 reference

https://pubmed.ncbi.nlm.nih.gov/9826673

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Core histone tail domains mediate oligonucleosome folding and nucleosomal DNA organization through distinct molecular mechanisms

1 reference

https://pubmed.ncbi.nlm.nih.gov/9826673

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Reversible oligonucleosome self-association: dependence on divalent cations and core histone tail domains

1 reference

https://pubmed.ncbi.nlm.nih.gov/9826673

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

DNA at the entry-exit of the nucleosome observed by cryoelectron microscopy

1 reference

https://pubmed.ncbi.nlm.nih.gov/9826673

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Role of the histone "tails" in the folding of oligonucleosomes depleted of histone H1

1 reference

https://pubmed.ncbi.nlm.nih.gov/9826673

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Linker histones stabilize the intrinsic salt-dependent folding of nucleosomal arrays: mechanistic ramifications for higher-order chromatin folding

1 reference

https://pubmed.ncbi.nlm.nih.gov/9826673

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Physicochemical studies of the folding of the 100 A nucleosome filament into the 300 A filament. Cation dependence

1 reference

https://pubmed.ncbi.nlm.nih.gov/9826673

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure of the chromatosome, a chromatin particle containing 160 base pairs of DNA and all the histones

1 reference

https://pubmed.ncbi.nlm.nih.gov/9826673

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1073/PNAS.95.24.14173

2 references

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9826673%20AND%20SRC:MED&resulttype=core&format=json

6 December 2019

1998PNAS...9514173B

0 references

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2 references

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9826673%20AND%20SRC:MED&resulttype=core&format=json

6 December 2019

2 references

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9826673%20AND%20SRC:MED&resulttype=core&format=json

6 December 2019

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